RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 FAM163AQ96GL9 167 aaPredicted RBP16■□□□□ 0.15
SYCP1-208ENST00000493377 SCUBE2Q9NQ36 999 aa15.95■□□□□ 0.14
SYCP1-208ENST00000493377 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
SYCP1-208ENST00000493377 ATMINO43313 823 aaPredicted RBP15.9■□□□□ 0.14
SYCP1-208ENST00000493377 NPM1P06748 294 aaKnown RBP eCLIP15.82■□□□□ 0.12
SYCP1-208ENST00000493377 MS4A3Q96HJ5 214 aa15.81■□□□□ 0.12
SYCP1-208ENST00000493377 CDAN1Q8IWY9 1227 aa15.8■□□□□ 0.12
SYCP1-208ENST00000493377 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
SYCP1-208ENST00000493377 ATN1P54259 1190 aaPredicted RBP15.65■□□□□ 0.1
SYCP1-208ENST00000493377 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
SYCP1-208ENST00000493377 MMRN1Q13201 1228 aa15.52■□□□□ 0.08
SYCP1-208ENST00000493377 BMP2KQ9NSY1 1161 aaPredicted RBP15.48■□□□□ 0.07
SYCP1-208ENST00000493377 SPNS2Q8IVW8 549 aa15.44■□□□□ 0.06
SYCP1-208ENST00000493377 CCDC61Q9Y6R9 512 aa15.44■□□□□ 0.06
SYCP1-208ENST00000493377 ST18O60284 1047 aa15.43■□□□□ 0.06
SYCP1-208ENST00000493377 TIE1P35590 1138 aa15.42■□□□□ 0.06
SYCP1-208ENST00000493377 SEC24BO95487 1268 aa15.41■□□□□ 0.06
SYCP1-208ENST00000493377 KIF12Q96FN5 646 aa15.41■□□□□ 0.06
SYCP1-208ENST00000493377 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
SYCP1-208ENST00000493377 COLQQ9Y215 455 aaPredicted RBP15.38■□□□□ 0.05
SYCP1-208ENST00000493377 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
SYCP1-208ENST00000493377 SLAIN1Q8ND83 568 aa15.32■□□□□ 0.04
SYCP1-208ENST00000493377 TRPC6Q9Y210 931 aa15.32■□□□□ 0.04
SYCP1-208ENST00000493377 IER5LQ5T953 404 aa15.3■□□□□ 0.04
SYCP1-208ENST00000493377 TMEM121BQ9BXQ6 578 aaPredicted RBP15.28■□□□□ 0.04
SYCP1-208ENST00000493377 TTLL13PA6NNM8 815 aa15.26■□□□□ 0.03
SYCP1-208ENST00000493377 MAP3K13O43283 966 aa15.23■□□□□ 0.03
SYCP1-208ENST00000493377 TRIM35Q9UPQ4 493 aa15.17■□□□□ 0.02
SYCP1-208ENST00000493377 SNPHO15079 494 aa15.11■□□□□ 0.01
SYCP1-208ENST00000493377 SGIP1Q9BQI5 828 aa15.06■□□□□ 0
SYCP1-208ENST00000493377 PLCG2P16885 1265 aa15.03■□□□□ -0
SYCP1-208ENST00000493377 MARVELD3Q96A59 401 aa15.02■□□□□ -0
SYCP1-208ENST00000493377 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
SYCP1-208ENST00000493377 PCDHB13Q9Y5F0 798 aa14.95□□□□□ -0.02
SYCP1-208ENST00000493377 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
SYCP1-208ENST00000493377 IRX5P78411 483 aaPredicted RBP14.92□□□□□ -0.02
SYCP1-208ENST00000493377 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
SYCP1-208ENST00000493377 KRTAP3-3Q9BYR6 98 aa14.89□□□□□ -0.03
SYCP1-208ENST00000493377 KRTAP3-2Q9BYR7 98 aa14.89□□□□□ -0.03
SYCP1-208ENST00000493377 EMP3P54852 163 aa14.88□□□□□ -0.03
SYCP1-208ENST00000493377 TMEM106CQ9BVX2 250 aa14.87□□□□□ -0.03
SYCP1-208ENST00000493377 OCEL1Q9H607 264 aa14.83□□□□□ -0.04
SYCP1-208ENST00000493377 PROM2Q8N271 834 aa14.82□□□□□ -0.04
SYCP1-208ENST00000493377 IFNL1Q8IU54 200 aa14.81□□□□□ -0.04
SYCP1-208ENST00000493377 HS3ST6Q96QI5 342 aa14.8□□□□□ -0.04
SYCP1-208ENST00000493377 MIER1Q8N108 512 aa14.74□□□□□ -0.05
SYCP1-208ENST00000493377 POTEB3A0JP26 581 aa14.73□□□□□ -0.05
SYCP1-208ENST00000493377 POTEBQ6S5H4 581 aa14.73□□□□□ -0.05
SYCP1-208ENST00000493377 FAM205CA6NFA0 338 aa14.72□□□□□ -0.05
SYCP1-208ENST00000493377 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
SYCP1-208ENST00000493377 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
SYCP1-208ENST00000493377 RNF166Q96A37 237 aaPredicted RBP14.61□□□□□ -0.07
SYCP1-208ENST00000493377 NUBP1P53384 320 aa14.58□□□□□ -0.08
SYCP1-208ENST00000493377 ZBTB47Q9UFB7 747 aaPredicted RBP14.58□□□□□ -0.08
SYCP1-208ENST00000493377 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
SYCP1-208ENST00000493377 L3MBTL3Q96JM7 780 aaPredicted RBP14.53□□□□□ -0.08
SYCP1-208ENST00000493377 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
SYCP1-208ENST00000493377 PDCD7Q8N8D1 485 aaKnown RBP14.51□□□□□ -0.09
SYCP1-208ENST00000493377 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
SYCP1-208ENST00000493377 HOXB1P14653 301 aaPredicted RBP14.36□□□□□ -0.11
SYCP1-208ENST00000493377 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
SYCP1-208ENST00000493377 ERBB3P21860 1342 aa14.35□□□□□ -0.11
SYCP1-208ENST00000493377 HOXB3P14651 431 aaPredicted RBP14.34□□□□□ -0.11
SYCP1-208ENST00000493377 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
SYCP1-208ENST00000493377 PTGER2P43116 358 aa14.32□□□□□ -0.12
SYCP1-208ENST00000493377 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
SYCP1-208ENST00000493377 ZNF710Q8N1W2 664 aa14.31□□□□□ -0.12
SYCP1-208ENST00000493377 PYGBP11216 843 aa14.3□□□□□ -0.12
SYCP1-208ENST00000493377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.28□□□□□ -0.12
SYCP1-208ENST00000493377 DOK7Q18PE1 504 aa14.25□□□□□ -0.13
SYCP1-208ENST00000493377 VARS2Q5ST30 1063 aaKnown RBP14.21□□□□□ -0.13
SYCP1-208ENST00000493377 DCAF8Q5TAQ9 597 aa14.21□□□□□ -0.13
SYCP1-208ENST00000493377 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
SYCP1-208ENST00000493377 ZNF467Q7Z7K2 595 aaPredicted RBP14.18□□□□□ -0.14
SYCP1-208ENST00000493377 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
SYCP1-208ENST00000493377 ZNF687Q8N1G0 1237 aa14.17□□□□□ -0.14
SYCP1-208ENST00000493377 G3V3G9 751 aa14.15□□□□□ -0.14
SYCP1-208ENST00000493377 BOLA1Q9Y3E2 137 aa14.12□□□□□ -0.15
SYCP1-208ENST00000493377 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
SYCP1-208ENST00000493377 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
SYCP1-208ENST00000493377 PSEN1P49768 467 aa14.03□□□□□ -0.16
SYCP1-208ENST00000493377 PLA2G2EQ9NZK7 142 aa14.03□□□□□ -0.16
SYCP1-208ENST00000493377 ANKRD13DQ6ZTN6 518 aa13.98□□□□□ -0.17
SYCP1-208ENST00000493377 CHRM1P11229 460 aaPredicted RBP13.93□□□□□ -0.18
SYCP1-208ENST00000493377 GSE1Q14687 1217 aa13.93□□□□□ -0.18
SYCP1-208ENST00000493377 GPR153Q6NV75 609 aa13.91□□□□□ -0.18
SYCP1-208ENST00000493377 LSM11P83369 360 aaKnown RBP eCLIP13.89□□□□□ -0.19
SYCP1-208ENST00000493377 PDAP1Q13442 181 aaKnown RBP13.88□□□□□ -0.19
SYCP1-208ENST00000493377 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
SYCP1-208ENST00000493377 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
SYCP1-208ENST00000493377 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
SYCP1-208ENST00000493377 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
SYCP1-208ENST00000493377 PBX2P40425 430 aa13.75□□□□□ -0.21
SYCP1-208ENST00000493377 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
SYCP1-208ENST00000493377 ARSIQ5FYB1 569 aa13.72□□□□□ -0.21
SYCP1-208ENST00000493377 MICALL2Q8IY33 904 aa13.68□□□□□ -0.22
SYCP1-208ENST00000493377 RGS20O76081 388 aa13.66□□□□□ -0.22
SYCP1-208ENST00000493377 IRX2Q9BZI1 471 aaPredicted RBP13.62□□□□□ -0.23
SYCP1-208ENST00000493377 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
SYCP1-208ENST00000493377 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms