RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 KCNH8Q96L42 1107 aa18.21■□□□□ 0.5
TRIM11-204ENST00000493030 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
TRIM11-204ENST00000493030 C14orf37Q86TY3 774 aa18.18■□□□□ 0.5
TRIM11-204ENST00000493030 ARXQ96QS3 562 aa18.17■□□□□ 0.5
TRIM11-204ENST00000493030 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
TRIM11-204ENST00000493030 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
TRIM11-204ENST00000493030 NBR1Q14596 966 aa18.14■□□□□ 0.49
TRIM11-204ENST00000493030 MYH16Q9H6N6 1097 aa18.12■□□□□ 0.49
TRIM11-204ENST00000493030 EIF4G2P78344 907 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRIM11-204ENST00000493030 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
TRIM11-204ENST00000493030 CLIP1P30622 1438 aa18.1■□□□□ 0.49
TRIM11-204ENST00000493030 GLIPR1L2Q4G1C9 344 aa18.08■□□□□ 0.49
TRIM11-204ENST00000493030 MIER1Q8N108 512 aa18.08■□□□□ 0.48
TRIM11-204ENST00000493030 PLEKHD1A6NEE1 506 aa18.07■□□□□ 0.48
TRIM11-204ENST00000493030 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
TRIM11-204ENST00000493030 ARID4BQ4LE39 1312 aaPredicted RBP18.02■□□□□ 0.47
TRIM11-204ENST00000493030 PPM1GO15355 546 aaPredicted RBP17.99■□□□□ 0.47
TRIM11-204ENST00000493030 HAP1P54257 671 aaPredicted RBP17.98■□□□□ 0.47
TRIM11-204ENST00000493030 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
TRIM11-204ENST00000493030 CFDP1Q9UEE9 299 aaPredicted RBP17.95■□□□□ 0.46
TRIM11-204ENST00000493030 CFAP53Q96M91 514 aa17.93■□□□□ 0.46
TRIM11-204ENST00000493030 KNSTRNQ9Y448 316 aa17.92■□□□□ 0.46
TRIM11-204ENST00000493030 CDK11BP21127 795 aaKnown RBP17.9■□□□□ 0.46
TRIM11-204ENST00000493030 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.46
TRIM11-204ENST00000493030 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
TRIM11-204ENST00000493030 CEP162Q5TB80 1403 aa17.88■□□□□ 0.45
TRIM11-204ENST00000493030 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
TRIM11-204ENST00000493030 CDCA8Q53HL2 280 aa17.87■□□□□ 0.45
TRIM11-204ENST00000493030 LMOD2Q6P5Q4 547 aa17.87■□□□□ 0.45
TRIM11-204ENST00000493030 LAS1LQ9Y4W2 734 aaKnown RBP17.86■□□□□ 0.45
TRIM11-204ENST00000493030 BECN1Q14457 450 aa17.86■□□□□ 0.45
TRIM11-204ENST00000493030 NCLP19338 710 aaKnown RBP17.84■□□□□ 0.45
TRIM11-204ENST00000493030 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.45
TRIM11-204ENST00000493030 POGKQ9P215 609 aa17.82■□□□□ 0.44
TRIM11-204ENST00000493030 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
TRIM11-204ENST00000493030 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
TRIM11-204ENST00000493030 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
TRIM11-204ENST00000493030 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
TRIM11-204ENST00000493030 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
TRIM11-204ENST00000493030 TPRNQ4KMQ1 711 aa17.79■□□□□ 0.44
TRIM11-204ENST00000493030 EEA1Q15075 1411 aa17.79■□□□□ 0.44
TRIM11-204ENST00000493030 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
TRIM11-204ENST00000493030 GOLGA6L22H0YM25 854 aa17.77■□□□□ 0.44
TRIM11-204ENST00000493030 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
TRIM11-204ENST00000493030 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.43
TRIM11-204ENST00000493030 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
TRIM11-204ENST00000493030 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
TRIM11-204ENST00000493030 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
TRIM11-204ENST00000493030 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
TRIM11-204ENST00000493030 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
TRIM11-204ENST00000493030 CC2D1BQ5T0F9 858 aaKnown RBP17.74■□□□□ 0.43
TRIM11-204ENST00000493030 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
TRIM11-204ENST00000493030 U2SURPO15042 1029 aaKnown RBP17.72■□□□□ 0.43
TRIM11-204ENST00000493030 ZRSR1Q15695 479 aaKnown RBP17.72■□□□□ 0.43
TRIM11-204ENST00000493030 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
TRIM11-204ENST00000493030 TAOK2Q9UL54 1235 aa17.71■□□□□ 0.43
TRIM11-204ENST00000493030 NPHP1O15259 732 aa17.71■□□□□ 0.43
TRIM11-204ENST00000493030 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
TRIM11-204ENST00000493030 RGS3P49796 1198 aa17.7■□□□□ 0.42
TRIM11-204ENST00000493030 MLECQ14165 292 aa17.67■□□□□ 0.42
TRIM11-204ENST00000493030 ANP32EQ9BTT0 268 aa17.67■□□□□ 0.42
TRIM11-204ENST00000493030 CEP164Q9UPV0 1460 aa17.66■□□□□ 0.42
TRIM11-204ENST00000493030 SOX12O15370 315 aa17.66■□□□□ 0.42
TRIM11-204ENST00000493030 PTMAP06454 111 aaKnown RBP17.66■□□□□ 0.42
TRIM11-204ENST00000493030 TNIKQ9UKE5 1360 aa17.66■□□□□ 0.42
TRIM11-204ENST00000493030 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
TRIM11-204ENST00000493030 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
TRIM11-204ENST00000493030 CCNB3Q8WWL7 1395 aa17.65■□□□□ 0.42
TRIM11-204ENST00000493030 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
TRIM11-204ENST00000493030 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
TRIM11-204ENST00000493030 SAFB2Q14151 953 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRIM11-204ENST00000493030 TMF1P82094 1093 aa17.6■□□□□ 0.41
TRIM11-204ENST00000493030 SRPK2P78362 688 aaKnown RBP17.59■□□□□ 0.41
TRIM11-204ENST00000493030 FGD1P98174 961 aa17.59■□□□□ 0.41
TRIM11-204ENST00000493030 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.4
TRIM11-204ENST00000493030 KCNJ4P48050 445 aa17.57■□□□□ 0.4
TRIM11-204ENST00000493030 DNTTIP2Q5QJE6 756 aaKnown RBP17.57■□□□□ 0.4
TRIM11-204ENST00000493030 PPP4R2Q9NY27 417 aa17.57■□□□□ 0.4
TRIM11-204ENST00000493030 NAP1L2Q9ULW6 460 aaPredicted RBP17.57■□□□□ 0.4
TRIM11-204ENST00000493030 KANK1Q14678 1352 aa17.56■□□□□ 0.4
TRIM11-204ENST00000493030 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
TRIM11-204ENST00000493030 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
TRIM11-204ENST00000493030 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
TRIM11-204ENST00000493030 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
TRIM11-204ENST00000493030 MS4A1P11836 297 aa17.54■□□□□ 0.4
TRIM11-204ENST00000493030 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
TRIM11-204ENST00000493030 GGT6Q6P531 493 aa17.53■□□□□ 0.4
TRIM11-204ENST00000493030 B4GALNT3Q6L9W6 998 aa17.53■□□□□ 0.4
TRIM11-204ENST00000493030 MORC1Q86VD1 984 aa17.52■□□□□ 0.4
TRIM11-204ENST00000493030 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.39
TRIM11-204ENST00000493030 STK26Q9P289 416 aa17.51■□□□□ 0.39
TRIM11-204ENST00000493030 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
TRIM11-204ENST00000493030 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
TRIM11-204ENST00000493030 CUX2O14529 1486 aa17.48■□□□□ 0.39
TRIM11-204ENST00000493030 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
TRIM11-204ENST00000493030 FOXD1Q16676 465 aa17.46■□□□□ 0.39
TRIM11-204ENST00000493030 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
TRIM11-204ENST00000493030 PKD2Q13563 968 aa17.44■□□□□ 0.38
TRIM11-204ENST00000493030 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
TRIM11-204ENST00000493030 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms