RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
TPR-208ENST00000492973 EVX2Q03828 476 aa14.6□□□□□ -0.07
TPR-208ENST00000492973 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
TPR-208ENST00000492973 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
TPR-208ENST00000492973 PKD2Q13563 968 aa14.58□□□□□ -0.08
TPR-208ENST00000492973 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
TPR-208ENST00000492973 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
TPR-208ENST00000492973 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
TPR-208ENST00000492973 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
TPR-208ENST00000492973 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
TPR-208ENST00000492973 PYGBP11216 843 aa14.47□□□□□ -0.09
TPR-208ENST00000492973 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
TPR-208ENST00000492973 ECM2O94769 699 aaPredicted RBP14.44□□□□□ -0.1
TPR-208ENST00000492973 MAP3K13O43283 966 aa14.39□□□□□ -0.11
TPR-208ENST00000492973 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
TPR-208ENST00000492973 CLCN6P51797 869 aa14.36□□□□□ -0.11
TPR-208ENST00000492973 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
TPR-208ENST00000492973 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
TPR-208ENST00000492973 PCDHB13Q9Y5F0 798 aa14.34□□□□□ -0.11
TPR-208ENST00000492973 RGL2O15211 777 aa14.33□□□□□ -0.12
TPR-208ENST00000492973 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
TPR-208ENST00000492973 GABBR2O75899 941 aa14.3□□□□□ -0.12
TPR-208ENST00000492973 IFNL1Q8IU54 200 aa14.3□□□□□ -0.12
TPR-208ENST00000492973 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
TPR-208ENST00000492973 ZNF467Q7Z7K2 595 aaPredicted RBP14.29□□□□□ -0.12
TPR-208ENST00000492973 PCDHB8Q9UN66 801 aa14.28□□□□□ -0.12
TPR-208ENST00000492973 RIOK3O14730 519 aaKnown RBP14.27□□□□□ -0.13
TPR-208ENST00000492973 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
TPR-208ENST00000492973 TRPC6Q9Y210 931 aa14.2□□□□□ -0.14
TPR-208ENST00000492973 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
TPR-208ENST00000492973 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
TPR-208ENST00000492973 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
TPR-208ENST00000492973 PSEN1P49768 467 aa14.14□□□□□ -0.15
TPR-208ENST00000492973 TIE1P35590 1138 aa14.13□□□□□ -0.15
TPR-208ENST00000492973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.11□□□□□ -0.15
TPR-208ENST00000492973 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
TPR-208ENST00000492973 BMP2KQ9NSY1 1161 aaPredicted RBP14.1□□□□□ -0.15
TPR-208ENST00000492973 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
TPR-208ENST00000492973 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
TPR-208ENST00000492973 TTLL13PA6NNM8 815 aa14.07□□□□□ -0.16
TPR-208ENST00000492973 ASTLQ6HA08 431 aaPredicted RBP14.06□□□□□ -0.16
TPR-208ENST00000492973 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
TPR-208ENST00000492973 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
TPR-208ENST00000492973 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
TPR-208ENST00000492973 DCBLD2Q96PD2 775 aa14.04□□□□□ -0.16
TPR-208ENST00000492973 STK25O00506 426 aa14.03□□□□□ -0.16
TPR-208ENST00000492973 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
TPR-208ENST00000492973 BCL11BQ9C0K0 894 aaPredicted RBP14.02□□□□□ -0.17
TPR-208ENST00000492973 ATN1P54259 1190 aaPredicted RBP14.01□□□□□ -0.17
TPR-208ENST00000492973 STK24Q9Y6E0 443 aa13.99□□□□□ -0.17
TPR-208ENST00000492973 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
TPR-208ENST00000492973 PELP1Q8IZL8 1130 aaKnown RBP13.95□□□□□ -0.18
TPR-208ENST00000492973 DNAJC5Q9H3Z4 198 aa13.95□□□□□ -0.18
TPR-208ENST00000492973 CABP2Q9NPB3 220 aa13.95□□□□□ -0.18
TPR-208ENST00000492973 EFCAB3Q8N7B9 438 aa13.89□□□□□ -0.19
TPR-208ENST00000492973 ABCC9O60706 1549 aa13.89□□□□□ -0.19
TPR-208ENST00000492973 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
TPR-208ENST00000492973 IER5LQ5T953 404 aa13.87□□□□□ -0.19
TPR-208ENST00000492973 NKX1-1Q15270 411 aaPredicted RBP13.86□□□□□ -0.19
TPR-208ENST00000492973 MKRN3Q13064 507 aaKnown RBP13.85□□□□□ -0.19
TPR-208ENST00000492973 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
TPR-208ENST00000492973 SLC39A7Q92504 469 aa13.84□□□□□ -0.19
TPR-208ENST00000492973 SOX12O15370 315 aa13.82□□□□□ -0.2
TPR-208ENST00000492973 C7P10643 843 aa13.81□□□□□ -0.2
TPR-208ENST00000492973 ILDR1Q86SU0 546 aaPredicted RBP13.81□□□□□ -0.2
TPR-208ENST00000492973 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
TPR-208ENST00000492973 MFRPQ9BY79 579 aa13.8□□□□□ -0.2
TPR-208ENST00000492973 METRNQ9UJH8 293 aa13.79□□□□□ -0.2
TPR-208ENST00000492973 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
TPR-208ENST00000492973 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
TPR-208ENST00000492973 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
TPR-208ENST00000492973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.217e-14■■■■□ 25.5
TPR-208ENST00000492973 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
TPR-208ENST00000492973 NLRP6P59044 892 aa13.74□□□□□ -0.21
TPR-208ENST00000492973 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
TPR-208ENST00000492973 OCEL1Q9H607 264 aa13.74□□□□□ -0.21
TPR-208ENST00000492973 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
TPR-208ENST00000492973 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
TPR-208ENST00000492973 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
TPR-208ENST00000492973 SEC24BO95487 1268 aa13.7□□□□□ -0.22
TPR-208ENST00000492973 PLCG2P16885 1265 aa13.7□□□□□ -0.22
TPR-208ENST00000492973 RYDENQ9NUL5 291 aaKnown RBP13.68□□□□□ -0.22
TPR-208ENST00000492973 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
TPR-208ENST00000492973 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
TPR-208ENST00000492973 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
TPR-208ENST00000492973 PPP1R37O75864 691 aa13.6□□□□□ -0.23
TPR-208ENST00000492973 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
TPR-208ENST00000492973 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
TPR-208ENST00000492973 PLCB2Q00722 1185 aa13.58□□□□□ -0.24
TPR-208ENST00000492973 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
TPR-208ENST00000492973 POTEJP0CG39 1038 aa13.54□□□□□ -0.24
TPR-208ENST00000492973 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
TPR-208ENST00000492973 BOLA1Q9Y3E2 137 aa13.53□□□□□ -0.24
TPR-208ENST00000492973 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
TPR-208ENST00000492973 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
TPR-208ENST00000492973 LHX8Q68G74 356 aa13.46□□□□□ -0.25
TPR-208ENST00000492973 G3V3G9 751 aa13.45□□□□□ -0.26
TPR-208ENST00000492973 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.26
TPR-208ENST00000492973 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
TPR-208ENST00000492973 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms