RNA–Protein interactions for RNA: ENST00000492882.1

USP34-220, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 348 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-220ENST00000492882 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
USP34-220ENST00000492882 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
USP34-220ENST00000492882 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
USP34-220ENST00000492882 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
USP34-220ENST00000492882 C7P10643 843 aa12.42□□□□□ -0.42
USP34-220ENST00000492882 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
USP34-220ENST00000492882 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
USP34-220ENST00000492882 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
USP34-220ENST00000492882 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
USP34-220ENST00000492882 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
USP34-220ENST00000492882 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
USP34-220ENST00000492882 SCUBE2Q9NQ36 999 aa12.31□□□□□ -0.44
USP34-220ENST00000492882 KIF12Q96FN5 646 aa12.3□□□□□ -0.44
USP34-220ENST00000492882 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
USP34-220ENST00000492882 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
USP34-220ENST00000492882 MIER1Q8N108 512 aa12.26□□□□□ -0.45
USP34-220ENST00000492882 MAP3K13O43283 966 aa12.25□□□□□ -0.45
USP34-220ENST00000492882 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
USP34-220ENST00000492882 PROM2Q8N271 834 aa12.23□□□□□ -0.45
USP34-220ENST00000492882 POTEFA5A3E0 1075 aa12.22□□□□□ -0.45
USP34-220ENST00000492882 LCE2DQ5TA82 110 aaPredicted RBP12.22□□□□□ -0.45
USP34-220ENST00000492882 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
USP34-220ENST00000492882 SEC24BO95487 1268 aa12.19□□□□□ -0.46
USP34-220ENST00000492882 TIE1P35590 1138 aa12.17□□□□□ -0.46
USP34-220ENST00000492882 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
USP34-220ENST00000492882 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
USP34-220ENST00000492882 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
USP34-220ENST00000492882 PCDHB13Q9Y5F0 798 aa12.09□□□□□ -0.47
USP34-220ENST00000492882 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
USP34-220ENST00000492882 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
USP34-220ENST00000492882 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
USP34-220ENST00000492882 IER5LQ5T953 404 aa11.99□□□□□ -0.49
USP34-220ENST00000492882 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
USP34-220ENST00000492882 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
USP34-220ENST00000492882 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
USP34-220ENST00000492882 NUBP1P53384 320 aa11.97□□□□□ -0.49
USP34-220ENST00000492882 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
USP34-220ENST00000492882 PLCG2P16885 1265 aa11.94□□□□□ -0.5
USP34-220ENST00000492882 ST18O60284 1047 aa11.93□□□□□ -0.5
USP34-220ENST00000492882 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
USP34-220ENST00000492882 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
USP34-220ENST00000492882 PYGBP11216 843 aa11.84□□□□□ -0.51
USP34-220ENST00000492882 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
USP34-220ENST00000492882 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
USP34-220ENST00000492882 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
USP34-220ENST00000492882 FKBP8Q14318 412 aa11.77□□□□□ -0.53
USP34-220ENST00000492882 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
USP34-220ENST00000492882 MARVELD3Q96A59 401 aa11.76□□□□□ -0.53
USP34-220ENST00000492882 SNPHO15079 494 aa11.72□□□□□ -0.53
USP34-220ENST00000492882 MMRN1Q13201 1228 aa11.71□□□□□ -0.53
USP34-220ENST00000492882 SPNS2Q8IVW8 549 aa11.71□□□□□ -0.53
USP34-220ENST00000492882 TMEM121BQ9BXQ6 578 aaPredicted RBP11.7□□□□□ -0.54
USP34-220ENST00000492882 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
USP34-220ENST00000492882 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
USP34-220ENST00000492882 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
USP34-220ENST00000492882 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
USP34-220ENST00000492882 EMP3P54852 163 aa11.61□□□□□ -0.55
USP34-220ENST00000492882 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
USP34-220ENST00000492882 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
USP34-220ENST00000492882 ZNF467Q7Z7K2 595 aaPredicted RBP11.57□□□□□ -0.56
USP34-220ENST00000492882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.567e-12■■□□□ 12.6
USP34-220ENST00000492882 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
USP34-220ENST00000492882 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
USP34-220ENST00000492882 GSE1Q14687 1217 aa11.55□□□□□ -0.56
USP34-220ENST00000492882 PSEN1P49768 467 aa11.52□□□□□ -0.57
USP34-220ENST00000492882 HS3ST6Q96QI5 342 aa11.52□□□□□ -0.57
USP34-220ENST00000492882 POTEB3A0JP26 581 aa11.5□□□□□ -0.57
USP34-220ENST00000492882 POTEBQ6S5H4 581 aa11.5□□□□□ -0.57
USP34-220ENST00000492882 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
USP34-220ENST00000492882 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
USP34-220ENST00000492882 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
USP34-220ENST00000492882 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
USP34-220ENST00000492882 G3V3G9 751 aa11.44□□□□□ -0.58
USP34-220ENST00000492882 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
USP34-220ENST00000492882 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
USP34-220ENST00000492882 PDAP1Q13442 181 aaKnown RBP11.4□□□□□ -0.58
USP34-220ENST00000492882 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
USP34-220ENST00000492882 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
USP34-220ENST00000492882 BOLA1Q9Y3E2 137 aa11.38□□□□□ -0.59
USP34-220ENST00000492882 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
USP34-220ENST00000492882 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
USP34-220ENST00000492882 ERBB3P21860 1342 aa11.33□□□□□ -0.6
USP34-220ENST00000492882 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
USP34-220ENST00000492882 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
USP34-220ENST00000492882 SPOCK2Q92563 424 aa11.28□□□□□ -0.6
USP34-220ENST00000492882 VARS2Q5ST30 1063 aaKnown RBP11.24□□□□□ -0.61
USP34-220ENST00000492882 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
USP34-220ENST00000492882 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
USP34-220ENST00000492882 RNF166Q96A37 237 aaPredicted RBP11.23□□□□□ -0.61
USP34-220ENST00000492882 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
USP34-220ENST00000492882 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
USP34-220ENST00000492882 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
USP34-220ENST00000492882 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
USP34-220ENST00000492882 ZNF687Q8N1G0 1237 aa11.1□□□□□ -0.63
USP34-220ENST00000492882 ANKRD13DQ6ZTN6 518 aa11.08□□□□□ -0.64
USP34-220ENST00000492882 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
USP34-220ENST00000492882 ZSWIM6Q9HCJ5 1215 aa11.07□□□□□ -0.64
USP34-220ENST00000492882 ARSIQ5FYB1 569 aa11.06□□□□□ -0.64
USP34-220ENST00000492882 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
USP34-220ENST00000492882 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms