RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
VTA1-204ENST00000491881 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
VTA1-204ENST00000491881 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
VTA1-204ENST00000491881 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
VTA1-204ENST00000491881 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
VTA1-204ENST00000491881 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
VTA1-204ENST00000491881 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
VTA1-204ENST00000491881 C7P10643 843 aa12.16□□□□□ -0.46
VTA1-204ENST00000491881 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
VTA1-204ENST00000491881 MAP3K13O43283 966 aa12.11□□□□□ -0.47
VTA1-204ENST00000491881 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
VTA1-204ENST00000491881 FKBP8Q14318 412 aa12.11□□□□□ -0.47
VTA1-204ENST00000491881 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
VTA1-204ENST00000491881 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
VTA1-204ENST00000491881 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
VTA1-204ENST00000491881 TIE1P35590 1138 aa12.04□□□□□ -0.48
VTA1-204ENST00000491881 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
VTA1-204ENST00000491881 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
VTA1-204ENST00000491881 NUBP1P53384 320 aa12.01□□□□□ -0.49
VTA1-204ENST00000491881 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
VTA1-204ENST00000491881 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
VTA1-204ENST00000491881 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
VTA1-204ENST00000491881 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
VTA1-204ENST00000491881 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
VTA1-204ENST00000491881 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
VTA1-204ENST00000491881 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
VTA1-204ENST00000491881 POTEMA6NI47 508 aa11.94□□□□□ -0.5
VTA1-204ENST00000491881 SEC24BO95487 1268 aa11.94□□□□□ -0.5
VTA1-204ENST00000491881 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
VTA1-204ENST00000491881 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
VTA1-204ENST00000491881 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
VTA1-204ENST00000491881 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
VTA1-204ENST00000491881 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
VTA1-204ENST00000491881 IER5LQ5T953 404 aa11.87□□□□□ -0.51
VTA1-204ENST00000491881 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
VTA1-204ENST00000491881 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
VTA1-204ENST00000491881 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
VTA1-204ENST00000491881 PYGBP11216 843 aa11.81□□□□□ -0.52
VTA1-204ENST00000491881 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
VTA1-204ENST00000491881 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
VTA1-204ENST00000491881 PLCG2P16885 1265 aa11.77□□□□□ -0.53
VTA1-204ENST00000491881 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
VTA1-204ENST00000491881 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
VTA1-204ENST00000491881 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
VTA1-204ENST00000491881 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
VTA1-204ENST00000491881 GSE1Q14687 1217 aa11.7□□□□□ -0.54
VTA1-204ENST00000491881 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
VTA1-204ENST00000491881 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
VTA1-204ENST00000491881 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
VTA1-204ENST00000491881 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
VTA1-204ENST00000491881 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
VTA1-204ENST00000491881 ST18O60284 1047 aa11.56□□□□□ -0.56
VTA1-204ENST00000491881 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
VTA1-204ENST00000491881 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
VTA1-204ENST00000491881 PSEN1P49768 467 aa11.53□□□□□ -0.56
VTA1-204ENST00000491881 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
VTA1-204ENST00000491881 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
VTA1-204ENST00000491881 CIZ1Q9ULV3 898 aaPredicted RBP11.52□□□□□ -0.57
VTA1-204ENST00000491881 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
VTA1-204ENST00000491881 PDCD7Q8N8D1 485 aaKnown RBP11.51□□□□□ -0.57
VTA1-204ENST00000491881 SNPHO15079 494 aa11.49□□□□□ -0.57
VTA1-204ENST00000491881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.573e-6■□□□□ 8.8
VTA1-204ENST00000491881 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
VTA1-204ENST00000491881 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
VTA1-204ENST00000491881 PDAP1Q13442 181 aaKnown RBP11.47□□□□□ -0.57
VTA1-204ENST00000491881 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
VTA1-204ENST00000491881 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
VTA1-204ENST00000491881 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
VTA1-204ENST00000491881 G3V3G9 751 aa11.36□□□□□ -0.59
VTA1-204ENST00000491881 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
VTA1-204ENST00000491881 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
VTA1-204ENST00000491881 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
VTA1-204ENST00000491881 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
VTA1-204ENST00000491881 EMP3P54852 163 aa11.3□□□□□ -0.6
VTA1-204ENST00000491881 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
VTA1-204ENST00000491881 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
VTA1-204ENST00000491881 FAM205CA6NFA0 338 aa11.22□□□□□ -0.61
VTA1-204ENST00000491881 MMRN1Q13201 1228 aa11.21□□□□□ -0.61
VTA1-204ENST00000491881 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
VTA1-204ENST00000491881 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
VTA1-204ENST00000491881 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
VTA1-204ENST00000491881 HOXB3P14651 431 aaPredicted RBP11.16□□□□□ -0.62
VTA1-204ENST00000491881 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
VTA1-204ENST00000491881 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
VTA1-204ENST00000491881 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
VTA1-204ENST00000491881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.14□□□□□ -0.63
VTA1-204ENST00000491881 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
VTA1-204ENST00000491881 ZFP91Q96JP5 570 aaPredicted RBP11.14□□□□□ -0.63
VTA1-204ENST00000491881 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
VTA1-204ENST00000491881 SOX12O15370 315 aa11.13□□□□□ -0.63
VTA1-204ENST00000491881 MICALL2Q8IY33 904 aa11.12□□□□□ -0.63
VTA1-204ENST00000491881 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
VTA1-204ENST00000491881 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
VTA1-204ENST00000491881 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
VTA1-204ENST00000491881 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
VTA1-204ENST00000491881 ERBB3P21860 1342 aa11.08□□□□□ -0.64
VTA1-204ENST00000491881 PHF8Q9UPP1 1060 aa11.07□□□□□ -0.64
VTA1-204ENST00000491881 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
VTA1-204ENST00000491881 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
VTA1-204ENST00000491881 TAOK2Q9UL54 1235 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms