RNA–Protein interactions for RNA: ENST00000491519.4

SATB1-216, Transcript of SATB homeobox 1, humanhuman

TSL 2 BASIC

Gene SATB1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-216ENST00000491519 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
SATB1-216ENST00000491519 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
SATB1-216ENST00000491519 KIF12Q96FN5 646 aa13.87□□□□□ -0.19
SATB1-216ENST00000491519 METRNQ9UJH8 293 aa13.86□□□□□ -0.19
SATB1-216ENST00000491519 RASEFQ8IZ41 740 aa13.84□□□□□ -0.19
SATB1-216ENST00000491519 TRPC6Q9Y210 931 aa13.83□□□□□ -0.2
SATB1-216ENST00000491519 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
SATB1-216ENST00000491519 SLC39A7Q92504 469 aa13.81□□□□□ -0.2
SATB1-216ENST00000491519 C7P10643 843 aa13.8□□□□□ -0.2
SATB1-216ENST00000491519 MIER1Q8N108 512 aa13.78□□□□□ -0.2
SATB1-216ENST00000491519 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
SATB1-216ENST00000491519 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
SATB1-216ENST00000491519 MAP3K13O43283 966 aa13.76□□□□□ -0.21
SATB1-216ENST00000491519 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
SATB1-216ENST00000491519 TIE1P35590 1138 aa13.69□□□□□ -0.22
SATB1-216ENST00000491519 NUBP1P53384 320 aa13.68□□□□□ -0.22
SATB1-216ENST00000491519 POTEMA6NI47 508 aa13.64□□□□□ -0.23
SATB1-216ENST00000491519 LCE2DQ5TA82 110 aaPredicted RBP13.64□□□□□ -0.23
SATB1-216ENST00000491519 TTLL13PA6NNM8 815 aa13.63□□□□□ -0.23
SATB1-216ENST00000491519 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
SATB1-216ENST00000491519 FKBP8Q14318 412 aa13.6□□□□□ -0.23
SATB1-216ENST00000491519 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
SATB1-216ENST00000491519 MAMSTRQ6ZN01 415 aa13.6□□□□□ -0.23
SATB1-216ENST00000491519 SGIP1Q9BQI5 828 aa13.59□□□□□ -0.23
SATB1-216ENST00000491519 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
SATB1-216ENST00000491519 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
SATB1-216ENST00000491519 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
SATB1-216ENST00000491519 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
SATB1-216ENST00000491519 IFNL1Q8IU54 200 aa13.53□□□□□ -0.24
SATB1-216ENST00000491519 SCUBE2Q9NQ36 999 aa13.52□□□□□ -0.25
SATB1-216ENST00000491519 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
SATB1-216ENST00000491519 IER5LQ5T953 404 aa13.49□□□□□ -0.25
SATB1-216ENST00000491519 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
SATB1-216ENST00000491519 SEC24BO95487 1268 aa13.41□□□□□ -0.26
SATB1-216ENST00000491519 TMEM106CQ9BVX2 250 aa13.4□□□□□ -0.26
SATB1-216ENST00000491519 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
SATB1-216ENST00000491519 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
SATB1-216ENST00000491519 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
SATB1-216ENST00000491519 PYGBP11216 843 aa13.34□□□□□ -0.27
SATB1-216ENST00000491519 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
SATB1-216ENST00000491519 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
SATB1-216ENST00000491519 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
SATB1-216ENST00000491519 PLCG2P16885 1265 aa13.26□□□□□ -0.29
SATB1-216ENST00000491519 VASPP50552 380 aaPredicted RBP13.24□□□□□ -0.29
SATB1-216ENST00000491519 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
SATB1-216ENST00000491519 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
SATB1-216ENST00000491519 ST18O60284 1047 aa13.19□□□□□ -0.3
SATB1-216ENST00000491519 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
SATB1-216ENST00000491519 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
SATB1-216ENST00000491519 GSE1Q14687 1217 aa13.13□□□□□ -0.31
SATB1-216ENST00000491519 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
SATB1-216ENST00000491519 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
SATB1-216ENST00000491519 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
SATB1-216ENST00000491519 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
SATB1-216ENST00000491519 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
SATB1-216ENST00000491519 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
SATB1-216ENST00000491519 PSEN1P49768 467 aa13.02□□□□□ -0.33
SATB1-216ENST00000491519 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
SATB1-216ENST00000491519 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
SATB1-216ENST00000491519 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
SATB1-216ENST00000491519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
SATB1-216ENST00000491519 SNPHO15079 494 aa12.94□□□□□ -0.34
SATB1-216ENST00000491519 PDAP1Q13442 181 aaKnown RBP12.94□□□□□ -0.34
SATB1-216ENST00000491519 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
SATB1-216ENST00000491519 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
SATB1-216ENST00000491519 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
SATB1-216ENST00000491519 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
SATB1-216ENST00000491519 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
SATB1-216ENST00000491519 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
SATB1-216ENST00000491519 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
SATB1-216ENST00000491519 POTEB3A0JP26 581 aa12.85□□□□□ -0.35
SATB1-216ENST00000491519 POTEBQ6S5H4 581 aa12.85□□□□□ -0.35
SATB1-216ENST00000491519 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
SATB1-216ENST00000491519 MMRN1Q13201 1228 aa12.82□□□□□ -0.36
SATB1-216ENST00000491519 HOXB3P14651 431 aaPredicted RBP12.79□□□□□ -0.36
SATB1-216ENST00000491519 EMP3P54852 163 aa12.78□□□□□ -0.36
SATB1-216ENST00000491519 KRTAP3-3Q9BYR6 98 aa12.78□□□□□ -0.36
SATB1-216ENST00000491519 KRTAP3-2Q9BYR7 98 aa12.78□□□□□ -0.36
SATB1-216ENST00000491519 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
SATB1-216ENST00000491519 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
SATB1-216ENST00000491519 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
SATB1-216ENST00000491519 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
SATB1-216ENST00000491519 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
SATB1-216ENST00000491519 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
SATB1-216ENST00000491519 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
SATB1-216ENST00000491519 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
SATB1-216ENST00000491519 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
SATB1-216ENST00000491519 G3V3G9 751 aa12.62□□□□□ -0.39
SATB1-216ENST00000491519 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
SATB1-216ENST00000491519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
SATB1-216ENST00000491519 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
SATB1-216ENST00000491519 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
SATB1-216ENST00000491519 DOK7Q18PE1 504 aa12.57□□□□□ -0.4
SATB1-216ENST00000491519 SOX12O15370 315 aa12.55□□□□□ -0.4
SATB1-216ENST00000491519 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
SATB1-216ENST00000491519 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
SATB1-216ENST00000491519 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
SATB1-216ENST00000491519 ERBB3P21860 1342 aa12.48□□□□□ -0.41
SATB1-216ENST00000491519 GPR153Q6NV75 609 aa12.48□□□□□ -0.41
SATB1-216ENST00000491519 FBXO22Q8NEZ5 403 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms