RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-213ENST00000491332 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
NCSTN-213ENST00000491332 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
NCSTN-213ENST00000491332 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
NCSTN-213ENST00000491332 CHRM1P11229 460 aaPredicted RBP13.56□□□□□ -0.24
NCSTN-213ENST00000491332 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
NCSTN-213ENST00000491332 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
NCSTN-213ENST00000491332 HS6ST3Q8IZP7 471 aa13.54□□□□□ -0.24
NCSTN-213ENST00000491332 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
NCSTN-213ENST00000491332 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
NCSTN-213ENST00000491332 PYGBP11216 843 aa13.49□□□□□ -0.25
NCSTN-213ENST00000491332 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
NCSTN-213ENST00000491332 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
NCSTN-213ENST00000491332 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
NCSTN-213ENST00000491332 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
NCSTN-213ENST00000491332 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
NCSTN-213ENST00000491332 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
NCSTN-213ENST00000491332 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
NCSTN-213ENST00000491332 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
NCSTN-213ENST00000491332 STK25O00506 426 aa13.38□□□□□ -0.27
NCSTN-213ENST00000491332 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
NCSTN-213ENST00000491332 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
NCSTN-213ENST00000491332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
NCSTN-213ENST00000491332 NKX1-1Q15270 411 aaPredicted RBP13.36□□□□□ -0.27
NCSTN-213ENST00000491332 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
NCSTN-213ENST00000491332 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
NCSTN-213ENST00000491332 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
NCSTN-213ENST00000491332 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
NCSTN-213ENST00000491332 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
NCSTN-213ENST00000491332 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
NCSTN-213ENST00000491332 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
NCSTN-213ENST00000491332 PCDHB8Q9UN66 801 aa13.27□□□□□ -0.29
NCSTN-213ENST00000491332 PCDHB13Q9Y5F0 798 aa13.27□□□□□ -0.29
NCSTN-213ENST00000491332 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
NCSTN-213ENST00000491332 PDAP1Q13442 181 aaKnown RBP13.24□□□□□ -0.29
NCSTN-213ENST00000491332 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
NCSTN-213ENST00000491332 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
NCSTN-213ENST00000491332 MAP3K13O43283 966 aa13.19□□□□□ -0.3
NCSTN-213ENST00000491332 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
NCSTN-213ENST00000491332 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
NCSTN-213ENST00000491332 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
NCSTN-213ENST00000491332 PSEN1P49768 467 aa13.17□□□□□ -0.3
NCSTN-213ENST00000491332 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
NCSTN-213ENST00000491332 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
NCSTN-213ENST00000491332 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
NCSTN-213ENST00000491332 BCANQ96GW7 911 aa13.08□□□□□ -0.32
NCSTN-213ENST00000491332 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
NCSTN-213ENST00000491332 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
NCSTN-213ENST00000491332 EFCAB3Q8N7B9 438 aa12.99□□□□□ -0.33
NCSTN-213ENST00000491332 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
NCSTN-213ENST00000491332 TRPC6Q9Y210 931 aa12.96□□□□□ -0.33
NCSTN-213ENST00000491332 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
NCSTN-213ENST00000491332 SOX12O15370 315 aa12.94□□□□□ -0.34
NCSTN-213ENST00000491332 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
NCSTN-213ENST00000491332 NLRP6P59044 892 aa12.91□□□□□ -0.34
NCSTN-213ENST00000491332 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
NCSTN-213ENST00000491332 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
NCSTN-213ENST00000491332 PPP1R37O75864 691 aa12.89□□□□□ -0.35
NCSTN-213ENST00000491332 HAX1O00165 279 aa12.86□□□□□ -0.35
NCSTN-213ENST00000491332 TIE1P35590 1138 aa12.85□□□□□ -0.35
NCSTN-213ENST00000491332 EVX2Q03828 476 aa12.85□□□□□ -0.35
NCSTN-213ENST00000491332 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
NCSTN-213ENST00000491332 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
NCSTN-213ENST00000491332 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
NCSTN-213ENST00000491332 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
NCSTN-213ENST00000491332 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
NCSTN-213ENST00000491332 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
NCSTN-213ENST00000491332 NBR1Q14596 966 aa12.78□□□□□ -0.36
NCSTN-213ENST00000491332 CLCN6P51797 869 aa12.76□□□□□ -0.37
NCSTN-213ENST00000491332 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
NCSTN-213ENST00000491332 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
NCSTN-213ENST00000491332 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
NCSTN-213ENST00000491332 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
NCSTN-213ENST00000491332 P3H3Q8IVL6 736 aa12.71□□□□□ -0.37
NCSTN-213ENST00000491332 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
NCSTN-213ENST00000491332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.38
NCSTN-213ENST00000491332 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
NCSTN-213ENST00000491332 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
NCSTN-213ENST00000491332 TPRNQ4KMQ1 711 aa12.66□□□□□ -0.38
NCSTN-213ENST00000491332 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
NCSTN-213ENST00000491332 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
NCSTN-213ENST00000491332 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
NCSTN-213ENST00000491332 GABBR2O75899 941 aa12.6□□□□□ -0.39
NCSTN-213ENST00000491332 PDE4AP27815 886 aa12.6□□□□□ -0.39
NCSTN-213ENST00000491332 MFSD10Q14728 455 aa12.6□□□□□ -0.39
NCSTN-213ENST00000491332 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
NCSTN-213ENST00000491332 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
NCSTN-213ENST00000491332 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
NCSTN-213ENST00000491332 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
NCSTN-213ENST00000491332 E2F4Q16254 413 aa12.58□□□□□ -0.4
NCSTN-213ENST00000491332 POTEHQ6S545 545 aa12.58□□□□□ -0.4
NCSTN-213ENST00000491332 IER5LQ5T953 404 aa12.56□□□□□ -0.4
NCSTN-213ENST00000491332 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
NCSTN-213ENST00000491332 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
NCSTN-213ENST00000491332 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
NCSTN-213ENST00000491332 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
NCSTN-213ENST00000491332 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
NCSTN-213ENST00000491332 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
NCSTN-213ENST00000491332 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
NCSTN-213ENST00000491332 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms