RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RASEFQ8IZ41 740 aa5.3□□□□□ -1.56
SNRNP40-207ENST00000491106 ZNF579Q8NAF0 562 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-207ENST00000491106 CIZ1Q9ULV3 898 aaPredicted RBP5.3□□□□□ -1.56
SNRNP40-207ENST00000491106 GALR2O43603 387 aaPredicted RBP5.27□□□□□ -1.57
SNRNP40-207ENST00000491106 PYGBP11216 843 aa5.25□□□□□ -1.57
SNRNP40-207ENST00000491106 GSE1Q14687 1217 aa5.25□□□□□ -1.57
SNRNP40-207ENST00000491106 SPOCK2Q92563 424 aa5.25□□□□□ -1.57
SNRNP40-207ENST00000491106 PCDHB13Q9Y5F0 798 aa5.25□□□□□ -1.57
SNRNP40-207ENST00000491106 MAP3K13O43283 966 aa5.24□□□□□ -1.57
SNRNP40-207ENST00000491106 NUBP1P53384 320 aa5.24□□□□□ -1.57
SNRNP40-207ENST00000491106 IFNLR1Q8IU57 520 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-207ENST00000491106 MS4A3Q96HJ5 214 aa5.23□□□□□ -1.57
SNRNP40-207ENST00000491106 CCDC61Q9Y6R9 512 aa5.23□□□□□ -1.57
SNRNP40-207ENST00000491106 KIF12Q96FN5 646 aa5.22□□□□□ -1.57
SNRNP40-207ENST00000491106 SEC24BO95487 1268 aa5.2□□□□□ -1.58
SNRNP40-207ENST00000491106 GOLGA2Q08379 1002 aa5.2□□□□□ -1.58
SNRNP40-207ENST00000491106 LHX8Q68G74 356 aa5.19□□□□□ -1.58
SNRNP40-207ENST00000491106 PCDHB8Q9UN66 801 aa5.18□□□□□ -1.58
SNRNP40-207ENST00000491106 POTEIP0CG38 1075 aa5.17□□□□□ -1.58
SNRNP40-207ENST00000491106 IFNL1Q8IU54 200 aa5.17□□□□□ -1.58
SNRNP40-207ENST00000491106 TMEM106CQ9BVX2 250 aa5.17□□□□□ -1.58
SNRNP40-207ENST00000491106 SGIP1Q9BQI5 828 aa5.16□□□□□ -1.58
SNRNP40-207ENST00000491106 ATMINO43313 823 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-207ENST00000491106 C7P10643 843 aa5.15□□□□□ -1.59
SNRNP40-207ENST00000491106 ATN1P54259 1190 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-207ENST00000491106 SLC39A7Q92504 469 aa5.15□□□□□ -1.59
SNRNP40-207ENST00000491106 ZNF467Q7Z7K2 595 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-207ENST00000491106 BMP2KQ9NSY1 1161 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-207ENST00000491106 METRNQ9UJH8 293 aa5.14□□□□□ -1.59
SNRNP40-207ENST00000491106 TRPC6Q9Y210 931 aa5.14□□□□□ -1.59
SNRNP40-207ENST00000491106 TIE1P35590 1138 aa5.13□□□□□ -1.59
SNRNP40-207ENST00000491106 MKRN3Q13064 507 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-207ENST00000491106 PELP1Q8IZL8 1130 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-207ENST00000491106 TRIM35Q9UPQ4 493 aa5.13□□□□□ -1.59
SNRNP40-207ENST00000491106 TTLL13PA6NNM8 815 aa5.12□□□□□ -1.59
SNRNP40-207ENST00000491106 ASTLQ6HA08 431 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-207ENST00000491106 PSEN1P49768 467 aa5.11□□□□□ -1.59
SNRNP40-207ENST00000491106 PLCG2P16885 1265 aa5.1□□□□□ -1.59
SNRNP40-207ENST00000491106 TRIM41Q8WV44 630 aa5.1□□□□□ -1.59
SNRNP40-207ENST00000491106 G3V3G9 751 aa5.09□□□□□ -1.59
SNRNP40-207ENST00000491106 ECM2O94769 699 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-207ENST00000491106 CHRM1P11229 460 aaPredicted RBP5.09□□□□□ -1.59
SNRNP40-207ENST00000491106 PDAP1Q13442 181 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-207ENST00000491106 MAMSTRQ6ZN01 415 aa5.08□□□□□ -1.6
SNRNP40-207ENST00000491106 SCUBE2Q9NQ36 999 aa5.08□□□□□ -1.6
SNRNP40-207ENST00000491106 TAOK2Q9UL54 1235 aa5.08□□□□□ -1.6
SNRNP40-207ENST00000491106 CABP2Q9NPB3 220 aa5.07□□□□□ -1.6
SNRNP40-207ENST00000491106 DCAF8L2P0C7V8 631 aa5.06□□□□□ -1.6
SNRNP40-207ENST00000491106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNRNP40-207ENST00000491106 RIOK3O14730 519 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-207ENST00000491106 OCEL1Q9H607 264 aa5.05□□□□□ -1.6
SNRNP40-207ENST00000491106 IER5LQ5T953 404 aa5.04□□□□□ -1.6
SNRNP40-207ENST00000491106 POTEB2H3BUK9 544 aa5.03□□□□□ -1.6
SNRNP40-207ENST00000491106 COLQQ9Y215 455 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-207ENST00000491106 FAM163AQ96GL9 167 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-207ENST00000491106 STK24Q9Y6E0 443 aa5.02□□□□□ -1.61
SNRNP40-207ENST00000491106 STK25O00506 426 aa5.01□□□□□ -1.61
SNRNP40-207ENST00000491106 VGFO15240 615 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-207ENST00000491106 OTUD5Q96G74 571 aa5.01□□□□□ -1.61
SNRNP40-207ENST00000491106 L3MBTL3Q96JM7 780 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-207ENST00000491106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5□□□□□ -1.61
SNRNP40-207ENST00000491106 C3orf67Q6ZVT6 689 aa5□□□□□ -1.61
SNRNP40-207ENST00000491106 SLAIN1Q8ND83 568 aa5□□□□□ -1.61
SNRNP40-207ENST00000491106 ZFP91Q96JP5 570 aaPredicted RBP5□□□□□ -1.61
SNRNP40-207ENST00000491106 EIF2AK3Q9NZJ5 1116 aaKnown RBP5□□□□□ -1.61
SNRNP40-207ENST00000491106 EFCAB3Q8N7B9 438 aa4.99□□□□□ -1.61
SNRNP40-207ENST00000491106 BCL11BQ9C0K0 894 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-207ENST00000491106 POTEFA5A3E0 1075 aa4.97□□□□□ -1.61
SNRNP40-207ENST00000491106 IRX5P78411 483 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-207ENST00000491106 RGL2O15211 777 aa4.96□□□□□ -1.62
SNRNP40-207ENST00000491106 PKD2Q13563 968 aa4.96□□□□□ -1.62
SNRNP40-207ENST00000491106 SOX12O15370 315 aa4.95□□□□□ -1.62
SNRNP40-207ENST00000491106 POTEJP0CG39 1038 aa4.95□□□□□ -1.62
SNRNP40-207ENST00000491106 DPY19L2Q6NUT2 758 aa4.95□□□□□ -1.62
SNRNP40-207ENST00000491106 CHGAP10645 457 aaKnown RBP4.94□□□□□ -1.62
SNRNP40-207ENST00000491106 RNF25Q96BH1 459 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-207ENST00000491106 BOLA1Q9Y3E2 137 aa4.94□□□□□ -1.62
SNRNP40-207ENST00000491106 SNPHO15079 494 aa4.93□□□□□ -1.62
SNRNP40-207ENST00000491106 NLRP6P59044 892 aa4.93□□□□□ -1.62
SNRNP40-207ENST00000491106 PHF8Q9UPP1 1060 aa4.92□□□□□ -1.62
SNRNP40-207ENST00000491106 ZNF710Q8N1W2 664 aa4.9□□□□□ -1.63
SNRNP40-207ENST00000491106 PDCD7Q8N8D1 485 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-207ENST00000491106 POTEMA6NI47 508 aa4.88□□□□□ -1.63
SNRNP40-207ENST00000491106 POTEGQ6S5H5 508 aa4.87□□□□□ -1.63
SNRNP40-207ENST00000491106 PLSCR2Q9NRY7 297 aa4.86□□□□□ -1.63
SNRNP40-207ENST00000491106 RIMBP2O15034 1052 aa4.85□□□□□ -1.63
SNRNP40-207ENST00000491106 MICALL2Q8IY33 904 aa4.85□□□□□ -1.63
SNRNP40-207ENST00000491106 ST18O60284 1047 aa4.84□□□□□ -1.63
SNRNP40-207ENST00000491106 TMC2Q8TDI7 906 aa4.84□□□□□ -1.63
SNRNP40-207ENST00000491106 MARVELD3Q96A59 401 aa4.84□□□□□ -1.63
SNRNP40-207ENST00000491106 MFRPQ9BY79 579 aa4.84□□□□□ -1.63
SNRNP40-207ENST00000491106 DOK7Q18PE1 504 aa4.83□□□□□ -1.64
SNRNP40-207ENST00000491106 RYDENQ9NUL5 291 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-207ENST00000491106 EMP3P54852 163 aa4.82□□□□□ -1.64
SNRNP40-207ENST00000491106 HS6ST3Q8IZP7 471 aa4.82□□□□□ -1.64
SNRNP40-207ENST00000491106 MS4A4AQ96JQ5 239 aa4.82□□□□□ -1.64
SNRNP40-207ENST00000491106 AMER1Q5JTC6 1135 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-207ENST00000491106 ERBB3P21860 1342 aa4.8□□□□□ -1.64
SNRNP40-207ENST00000491106 FAM205CA6NFA0 338 aa4.8□□□□□ -1.64
SNRNP40-207ENST00000491106 ILDR1Q86SU0 546 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms