RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 GSE1Q14687 1217 aa12.4□□□□□ -0.42
PHC3-212ENST00000490723 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
PHC3-212ENST00000490723 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
PHC3-212ENST00000490723 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
PHC3-212ENST00000490723 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
PHC3-212ENST00000490723 PYGBP11216 843 aa12.32□□□□□ -0.44
PHC3-212ENST00000490723 GABBR2O75899 941 aa12.29□□□□□ -0.44
PHC3-212ENST00000490723 KIF12Q96FN5 646 aa12.28□□□□□ -0.44
PHC3-212ENST00000490723 MAP3K13O43283 966 aa12.26□□□□□ -0.45
PHC3-212ENST00000490723 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
PHC3-212ENST00000490723 CLCN6P51797 869 aa12.23□□□□□ -0.45
PHC3-212ENST00000490723 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
PHC3-212ENST00000490723 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
PHC3-212ENST00000490723 PKD2Q13563 968 aa12.22□□□□□ -0.45
PHC3-212ENST00000490723 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
PHC3-212ENST00000490723 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
PHC3-212ENST00000490723 CHRM1P11229 460 aaPredicted RBP12.2□□□□□ -0.46
PHC3-212ENST00000490723 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
PHC3-212ENST00000490723 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
PHC3-212ENST00000490723 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
PHC3-212ENST00000490723 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
PHC3-212ENST00000490723 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
PHC3-212ENST00000490723 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
PHC3-212ENST00000490723 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
PHC3-212ENST00000490723 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
PHC3-212ENST00000490723 RNF25Q96BH1 459 aaPredicted RBP12.08□□□□□ -0.48
PHC3-212ENST00000490723 RGL2O15211 777 aa12.07□□□□□ -0.48
PHC3-212ENST00000490723 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
PHC3-212ENST00000490723 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
PHC3-212ENST00000490723 TIE1P35590 1138 aa12.02□□□□□ -0.49
PHC3-212ENST00000490723 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.49
PHC3-212ENST00000490723 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
PHC3-212ENST00000490723 PSEN1P49768 467 aa12.01□□□□□ -0.49
PHC3-212ENST00000490723 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
PHC3-212ENST00000490723 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
PHC3-212ENST00000490723 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
PHC3-212ENST00000490723 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
PHC3-212ENST00000490723 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
PHC3-212ENST00000490723 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
PHC3-212ENST00000490723 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.49
PHC3-212ENST00000490723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
PHC3-212ENST00000490723 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
PHC3-212ENST00000490723 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
PHC3-212ENST00000490723 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
PHC3-212ENST00000490723 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
PHC3-212ENST00000490723 STK25O00506 426 aa11.89□□□□□ -0.51
PHC3-212ENST00000490723 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
PHC3-212ENST00000490723 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
PHC3-212ENST00000490723 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
PHC3-212ENST00000490723 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
PHC3-212ENST00000490723 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
PHC3-212ENST00000490723 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
PHC3-212ENST00000490723 MKRN3Q13064 507 aaKnown RBP11.83□□□□□ -0.52
PHC3-212ENST00000490723 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
PHC3-212ENST00000490723 C7P10643 843 aa11.81□□□□□ -0.52
PHC3-212ENST00000490723 EFCAB3Q8N7B9 438 aa11.8□□□□□ -0.52
PHC3-212ENST00000490723 SEC24BO95487 1268 aa11.78□□□□□ -0.52
PHC3-212ENST00000490723 IER5LQ5T953 404 aa11.78□□□□□ -0.52
PHC3-212ENST00000490723 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
PHC3-212ENST00000490723 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
PHC3-212ENST00000490723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.533e-7■■□□□ 11.7
PHC3-212ENST00000490723 PLCG2P16885 1265 aa11.73□□□□□ -0.53
PHC3-212ENST00000490723 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
PHC3-212ENST00000490723 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
PHC3-212ENST00000490723 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
PHC3-212ENST00000490723 SOX12O15370 315 aa11.7□□□□□ -0.54
PHC3-212ENST00000490723 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
PHC3-212ENST00000490723 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
PHC3-212ENST00000490723 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
PHC3-212ENST00000490723 MFRPQ9BY79 579 aa11.65□□□□□ -0.54
PHC3-212ENST00000490723 NLRP6P59044 892 aa11.64□□□□□ -0.55
PHC3-212ENST00000490723 DPY19L2Q6NUT2 758 aa11.64□□□□□ -0.55
PHC3-212ENST00000490723 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
PHC3-212ENST00000490723 LHX8Q68G74 356 aa11.63□□□□□ -0.55
PHC3-212ENST00000490723 ILDR1Q86SU0 546 aaPredicted RBP11.62□□□□□ -0.55
PHC3-212ENST00000490723 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
PHC3-212ENST00000490723 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
PHC3-212ENST00000490723 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
PHC3-212ENST00000490723 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
PHC3-212ENST00000490723 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
PHC3-212ENST00000490723 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
PHC3-212ENST00000490723 G3V3G9 751 aa11.54□□□□□ -0.56
PHC3-212ENST00000490723 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.53□□□□□ -0.56
PHC3-212ENST00000490723 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.57
PHC3-212ENST00000490723 GTPBP6O43824 516 aaPredicted RBP11.51□□□□□ -0.57
PHC3-212ENST00000490723 PPP1R37O75864 691 aa11.51□□□□□ -0.57
PHC3-212ENST00000490723 RYDENQ9NUL5 291 aaKnown RBP11.51□□□□□ -0.57
PHC3-212ENST00000490723 MAMSTRQ6ZN01 415 aa11.49□□□□□ -0.57
PHC3-212ENST00000490723 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
PHC3-212ENST00000490723 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
PHC3-212ENST00000490723 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
PHC3-212ENST00000490723 OTUD5Q96G74 571 aa11.47□□□□□ -0.57
PHC3-212ENST00000490723 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
PHC3-212ENST00000490723 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
PHC3-212ENST00000490723 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
PHC3-212ENST00000490723 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
PHC3-212ENST00000490723 TMEM121BQ9BXQ6 578 aaPredicted RBP11.43□□□□□ -0.58
PHC3-212ENST00000490723 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
PHC3-212ENST00000490723 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
PHC3-212ENST00000490723 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms