RNA–Protein interactions for RNA: ENST00000490439.1

NUP205-208, Transcript of nucleoporin 205, humanhuman

TSL 3

Gene NUP205, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP205-208ENST00000490439 METRNQ9UJH8 293 aa16.55■□□□□ 0.24
NUP205-208ENST00000490439 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
NUP205-208ENST00000490439 POTEMA6NI47 508 aa16.51■□□□□ 0.23
NUP205-208ENST00000490439 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
NUP205-208ENST00000490439 SLC39A7Q92504 469 aa16.5■□□□□ 0.23
NUP205-208ENST00000490439 ATMINO43313 823 aaPredicted RBP16.48■□□□□ 0.23
NUP205-208ENST00000490439 C7P10643 843 aa16.47■□□□□ 0.23
NUP205-208ENST00000490439 POTEGQ6S5H5 508 aa16.45■□□□□ 0.22
NUP205-208ENST00000490439 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
NUP205-208ENST00000490439 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
NUP205-208ENST00000490439 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
NUP205-208ENST00000490439 ATN1P54259 1190 aaPredicted RBP16.35■□□□□ 0.21
NUP205-208ENST00000490439 POTEJP0CG39 1038 aa16.33■□□□□ 0.2
NUP205-208ENST00000490439 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
NUP205-208ENST00000490439 MIER1Q8N108 512 aa16.3■□□□□ 0.2
NUP205-208ENST00000490439 PROM2Q8N271 834 aa16.3■□□□□ 0.2
NUP205-208ENST00000490439 SCUBE2Q9NQ36 999 aa16.3■□□□□ 0.2
NUP205-208ENST00000490439 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
NUP205-208ENST00000490439 BMP2KQ9NSY1 1161 aaPredicted RBP16.23■□□□□ 0.19
NUP205-208ENST00000490439 MAP3K13O43283 966 aa16.22■□□□□ 0.19
NUP205-208ENST00000490439 PCDH10Q9P2E7 1040 aa16.21■□□□□ 0.19
NUP205-208ENST00000490439 TRPC6Q9Y210 931 aa16.21■□□□□ 0.19
NUP205-208ENST00000490439 RASEFQ8IZ41 740 aa16.17■□□□□ 0.18
NUP205-208ENST00000490439 TIE1P35590 1138 aa16.16■□□□□ 0.18
NUP205-208ENST00000490439 SEC24BO95487 1268 aa16.15■□□□□ 0.18
NUP205-208ENST00000490439 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
NUP205-208ENST00000490439 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
NUP205-208ENST00000490439 POTEFA5A3E0 1075 aa16.12■□□□□ 0.17
NUP205-208ENST00000490439 TTLL13PA6NNM8 815 aa16.07■□□□□ 0.16
NUP205-208ENST00000490439 LCE2DQ5TA82 110 aaPredicted RBP16.07■□□□□ 0.16
NUP205-208ENST00000490439 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
NUP205-208ENST00000490439 COLQQ9Y215 455 aaPredicted RBP16.04■□□□□ 0.16
NUP205-208ENST00000490439 PCDHB13Q9Y5F0 798 aa16.04■□□□□ 0.16
NUP205-208ENST00000490439 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
NUP205-208ENST00000490439 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
NUP205-208ENST00000490439 NACADO15069 1562 aa15.98■□□□□ 0.15
NUP205-208ENST00000490439 SGIP1Q9BQI5 828 aa15.96■□□□□ 0.15
NUP205-208ENST00000490439 IER5LQ5T953 404 aa15.94■□□□□ 0.14
NUP205-208ENST00000490439 FAM212AQ96EL1 285 aa15.89■□□□□ 0.13
NUP205-208ENST00000490439 NUBP1P53384 320 aa15.88■□□□□ 0.13
NUP205-208ENST00000490439 IFNL1Q8IU54 200 aa15.88■□□□□ 0.13
NUP205-208ENST00000490439 SLAIN1Q8ND83 568 aa15.88■□□□□ 0.13
NUP205-208ENST00000490439 TMEM106CQ9BVX2 250 aa15.88■□□□□ 0.13
NUP205-208ENST00000490439 PLCG2P16885 1265 aa15.85■□□□□ 0.13
NUP205-208ENST00000490439 CDAN1Q8IWY9 1227 aa15.85■□□□□ 0.13
NUP205-208ENST00000490439 ST18O60284 1047 aa15.75■□□□□ 0.11
NUP205-208ENST00000490439 DCAF8Q5TAQ9 597 aa15.74■□□□□ 0.11
NUP205-208ENST00000490439 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
NUP205-208ENST00000490439 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
NUP205-208ENST00000490439 PYGBP11216 843 aa15.69■□□□□ 0.1
NUP205-208ENST00000490439 FKBP8Q14318 412 aa15.69■□□□□ 0.1
NUP205-208ENST00000490439 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
NUP205-208ENST00000490439 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
NUP205-208ENST00000490439 OCEL1Q9H607 264 aa15.66■□□□□ 0.1
NUP205-208ENST00000490439 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
NUP205-208ENST00000490439 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.61■□□□□ 0.09
NUP205-208ENST00000490439 PCDHB8Q9UN66 801 aa15.61■□□□□ 0.09
NUP205-208ENST00000490439 SNPHO15079 494 aa15.58■□□□□ 0.08
NUP205-208ENST00000490439 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
NUP205-208ENST00000490439 TMEM121BQ9BXQ6 578 aaPredicted RBP15.53■□□□□ 0.08
NUP205-208ENST00000490439 GOLGA2Q08379 1002 aa15.51■□□□□ 0.07
NUP205-208ENST00000490439 MARVELD3Q96A59 401 aa15.5■□□□□ 0.07
NUP205-208ENST00000490439 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
NUP205-208ENST00000490439 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
NUP205-208ENST00000490439 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
NUP205-208ENST00000490439 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.07
NUP205-208ENST00000490439 MKRN3Q13064 507 aaKnown RBP15.46■□□□□ 0.07
NUP205-208ENST00000490439 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.07
NUP205-208ENST00000490439 MMRN1Q13201 1228 aa15.44■□□□□ 0.06
NUP205-208ENST00000490439 ZNF467Q7Z7K2 595 aaPredicted RBP15.43■□□□□ 0.06
NUP205-208ENST00000490439 SPNS2Q8IVW8 549 aa15.43■□□□□ 0.06
NUP205-208ENST00000490439 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
NUP205-208ENST00000490439 GSE1Q14687 1217 aa15.42■□□□□ 0.06
NUP205-208ENST00000490439 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
NUP205-208ENST00000490439 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
NUP205-208ENST00000490439 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
NUP205-208ENST00000490439 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
NUP205-208ENST00000490439 EMP3P54852 163 aa15.37■□□□□ 0.05
NUP205-208ENST00000490439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.36■□□□□ 0.05
NUP205-208ENST00000490439 PSEN1P49768 467 aa15.31■□□□□ 0.04
NUP205-208ENST00000490439 VASPP50552 380 aaPredicted RBP15.29■□□□□ 0.04
NUP205-208ENST00000490439 EIF4G1Q04637 1599 aaKnown RBP15.27■□□□□ 0.03
NUP205-208ENST00000490439 FAM205CA6NFA0 338 aa15.25■□□□□ 0.03
NUP205-208ENST00000490439 G3V3G9 751 aa15.24■□□□□ 0.03
NUP205-208ENST00000490439 CHRM1P11229 460 aaPredicted RBP15.24■□□□□ 0.03
NUP205-208ENST00000490439 HS3ST6Q96QI5 342 aa15.22■□□□□ 0.03
NUP205-208ENST00000490439 PDAP1Q13442 181 aaKnown RBP15.19■□□□□ 0.02
NUP205-208ENST00000490439 DPY19L2Q6NUT2 758 aa15.16■□□□□ 0.02
NUP205-208ENST00000490439 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
NUP205-208ENST00000490439 CIZ1Q9ULV3 898 aaPredicted RBP15.15■□□□□ 0.02
NUP205-208ENST00000490439 POTEB3A0JP26 581 aa15.13■□□□□ 0.01
NUP205-208ENST00000490439 POTEBQ6S5H4 581 aa15.13■□□□□ 0.01
NUP205-208ENST00000490439 KRTAP3-3Q9BYR6 98 aa15.13■□□□□ 0.01
NUP205-208ENST00000490439 KRTAP3-2Q9BYR7 98 aa15.13■□□□□ 0.01
NUP205-208ENST00000490439 BOLA1Q9Y3E2 137 aa15.11■□□□□ 0.01
NUP205-208ENST00000490439 ZNF710Q8N1W2 664 aa15.09■□□□□ 0.01
NUP205-208ENST00000490439 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
NUP205-208ENST00000490439 SPOCK2Q92563 424 aa15.06■□□□□ 0
NUP205-208ENST00000490439 ERBB3P21860 1342 aa15□□□□□ -0.01
NUP205-208ENST00000490439 HOXB3P14651 431 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms