RNA–Protein interactions for RNA: ENST00000489597.1

SP110-213, Transcript of SP110 nuclear body protein, humanhuman

TSL 2

Gene SP110, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-213ENST00000489597 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
SP110-213ENST00000489597 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
SP110-213ENST00000489597 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
SP110-213ENST00000489597 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
SP110-213ENST00000489597 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
SP110-213ENST00000489597 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
SP110-213ENST00000489597 RIOK3O14730 519 aaKnown RBP13.38□□□□□ -0.27
SP110-213ENST00000489597 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
SP110-213ENST00000489597 SPRYD3Q8NCJ5 442 aa13.35□□□□□ -0.27
SP110-213ENST00000489597 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
SP110-213ENST00000489597 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
SP110-213ENST00000489597 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
SP110-213ENST00000489597 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
SP110-213ENST00000489597 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
SP110-213ENST00000489597 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
SP110-213ENST00000489597 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.29
SP110-213ENST00000489597 PYGBP11216 843 aa13.2□□□□□ -0.3
SP110-213ENST00000489597 STK25O00506 426 aa13.18□□□□□ -0.3
SP110-213ENST00000489597 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
SP110-213ENST00000489597 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
SP110-213ENST00000489597 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
SP110-213ENST00000489597 KDM2AQ9Y2K7 1162 aa13.15□□□□□ -0.3
SP110-213ENST00000489597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.14□□□□□ -0.31
SP110-213ENST00000489597 ZFP91Q96JP5 570 aaPredicted RBP13.14□□□□□ -0.31
SP110-213ENST00000489597 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
SP110-213ENST00000489597 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
SP110-213ENST00000489597 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
SP110-213ENST00000489597 BCANQ96GW7 911 aa13.12□□□□□ -0.31
SP110-213ENST00000489597 CCDC61Q9Y6R9 512 aa13.12□□□□□ -0.31
SP110-213ENST00000489597 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
SP110-213ENST00000489597 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
SP110-213ENST00000489597 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
SP110-213ENST00000489597 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
SP110-213ENST00000489597 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
SP110-213ENST00000489597 PDAP1Q13442 181 aaKnown RBP13.06□□□□□ -0.32
SP110-213ENST00000489597 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
SP110-213ENST00000489597 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.33
SP110-213ENST00000489597 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
SP110-213ENST00000489597 PSEN1P49768 467 aa12.95□□□□□ -0.34
SP110-213ENST00000489597 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
SP110-213ENST00000489597 MAP3K13O43283 966 aa12.9□□□□□ -0.34
SP110-213ENST00000489597 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
SP110-213ENST00000489597 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
SP110-213ENST00000489597 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
SP110-213ENST00000489597 MFRPQ9BY79 579 aa12.82□□□□□ -0.36
SP110-213ENST00000489597 SOX12O15370 315 aa12.8□□□□□ -0.36
SP110-213ENST00000489597 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
SP110-213ENST00000489597 NLRP6P59044 892 aa12.76□□□□□ -0.37
SP110-213ENST00000489597 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
SP110-213ENST00000489597 NBR1Q14596 966 aa12.75□□□□□ -0.37
SP110-213ENST00000489597 FBXO22Q8NEZ5 403 aa12.75□□□□□ -0.37
SP110-213ENST00000489597 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
SP110-213ENST00000489597 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
SP110-213ENST00000489597 P3H3Q8IVL6 736 aa12.7□□□□□ -0.38
SP110-213ENST00000489597 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
SP110-213ENST00000489597 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
SP110-213ENST00000489597 CLCN6P51797 869 aa12.66□□□□□ -0.38
SP110-213ENST00000489597 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
SP110-213ENST00000489597 TIE1P35590 1138 aa12.65□□□□□ -0.38
SP110-213ENST00000489597 TMEM106CQ9BVX2 250 aa12.65□□□□□ -0.38
SP110-213ENST00000489597 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
SP110-213ENST00000489597 PPP1R37O75864 691 aa12.62□□□□□ -0.39
SP110-213ENST00000489597 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
SP110-213ENST00000489597 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
SP110-213ENST00000489597 MS4A4AQ96JQ5 239 aa12.58□□□□□ -0.4
SP110-213ENST00000489597 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
SP110-213ENST00000489597 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
SP110-213ENST00000489597 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
SP110-213ENST00000489597 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
SP110-213ENST00000489597 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
SP110-213ENST00000489597 KCNV2Q8TDN2 545 aa12.53□□□□□ -0.4
SP110-213ENST00000489597 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
SP110-213ENST00000489597 HAX1O00165 279 aa12.48□□□□□ -0.41
SP110-213ENST00000489597 PDE4AP27815 886 aa12.48□□□□□ -0.41
SP110-213ENST00000489597 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
SP110-213ENST00000489597 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
SP110-213ENST00000489597 MFSD10Q14728 455 aa12.47□□□□□ -0.41
SP110-213ENST00000489597 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
SP110-213ENST00000489597 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
SP110-213ENST00000489597 E2F4Q16254 413 aa12.46□□□□□ -0.41
SP110-213ENST00000489597 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
SP110-213ENST00000489597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
SP110-213ENST00000489597 ARIH1Q9Y4X5 557 aaPredicted RBP12.41□□□□□ -0.42
SP110-213ENST00000489597 IER5LQ5T953 404 aa12.4□□□□□ -0.42
SP110-213ENST00000489597 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
SP110-213ENST00000489597 EVX2Q03828 476 aa12.39□□□□□ -0.43
SP110-213ENST00000489597 ASTLQ6HA08 431 aaPredicted RBP12.39□□□□□ -0.43
SP110-213ENST00000489597 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
SP110-213ENST00000489597 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
SP110-213ENST00000489597 ATMINO43313 823 aaPredicted RBP12.35□□□□□ -0.43
SP110-213ENST00000489597 TULP1O00294 542 aaPredicted RBP12.34□□□□□ -0.43
SP110-213ENST00000489597 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
SP110-213ENST00000489597 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
SP110-213ENST00000489597 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
SP110-213ENST00000489597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
SP110-213ENST00000489597 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
SP110-213ENST00000489597 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
SP110-213ENST00000489597 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
SP110-213ENST00000489597 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
SP110-213ENST00000489597 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms