RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 ASTLQ6HA08 431 aaPredicted RBP15.21■□□□□ 0.03
CBWD1-216ENST00000489272 SCUBE2Q9NQ36 999 aa15.14■□□□□ 0.01
CBWD1-216ENST00000489272 ATMINO43313 823 aaPredicted RBP15.13■□□□□ 0.01
CBWD1-216ENST00000489272 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
CBWD1-216ENST00000489272 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
CBWD1-216ENST00000489272 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
CBWD1-216ENST00000489272 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
CBWD1-216ENST00000489272 POTEFA5A3E0 1075 aa14.95□□□□□ -0.02
CBWD1-216ENST00000489272 ATN1P54259 1190 aaPredicted RBP14.9□□□□□ -0.02
CBWD1-216ENST00000489272 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
CBWD1-216ENST00000489272 MMRN1Q13201 1228 aa14.82□□□□□ -0.04
CBWD1-216ENST00000489272 SPNS2Q8IVW8 549 aa14.74□□□□□ -0.05
CBWD1-216ENST00000489272 BMP2KQ9NSY1 1161 aaPredicted RBP14.72□□□□□ -0.05
CBWD1-216ENST00000489272 TRPC6Q9Y210 931 aa14.72□□□□□ -0.05
CBWD1-216ENST00000489272 ST18O60284 1047 aa14.71□□□□□ -0.05
CBWD1-216ENST00000489272 COLQQ9Y215 455 aaPredicted RBP14.68□□□□□ -0.06
CBWD1-216ENST00000489272 CCDC61Q9Y6R9 512 aa14.65□□□□□ -0.06
CBWD1-216ENST00000489272 SEC24BO95487 1268 aa14.63□□□□□ -0.07
CBWD1-216ENST00000489272 KIF12Q96FN5 646 aa14.63□□□□□ -0.07
CBWD1-216ENST00000489272 TIE1P35590 1138 aa14.62□□□□□ -0.07
CBWD1-216ENST00000489272 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
CBWD1-216ENST00000489272 SLAIN1Q8ND83 568 aa14.57□□□□□ -0.08
CBWD1-216ENST00000489272 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
CBWD1-216ENST00000489272 TTLL13PA6NNM8 815 aa14.49□□□□□ -0.09
CBWD1-216ENST00000489272 IER5LQ5T953 404 aa14.49□□□□□ -0.09
CBWD1-216ENST00000489272 TMEM121BQ9BXQ6 578 aaPredicted RBP14.49□□□□□ -0.09
CBWD1-216ENST00000489272 MAP3K13O43283 966 aa14.47□□□□□ -0.09
CBWD1-216ENST00000489272 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
CBWD1-216ENST00000489272 MARVELD3Q96A59 401 aa14.37□□□□□ -0.11
CBWD1-216ENST00000489272 SNPHO15079 494 aa14.32□□□□□ -0.12
CBWD1-216ENST00000489272 PLCG2P16885 1265 aa14.25□□□□□ -0.13
CBWD1-216ENST00000489272 KRTAP3-3Q9BYR6 98 aa14.25□□□□□ -0.13
CBWD1-216ENST00000489272 KRTAP3-2Q9BYR7 98 aa14.25□□□□□ -0.13
CBWD1-216ENST00000489272 SGIP1Q9BQI5 828 aa14.24□□□□□ -0.13
CBWD1-216ENST00000489272 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
CBWD1-216ENST00000489272 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
CBWD1-216ENST00000489272 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
CBWD1-216ENST00000489272 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
CBWD1-216ENST00000489272 IRX5P78411 483 aaPredicted RBP14.17□□□□□ -0.14
CBWD1-216ENST00000489272 EMP3P54852 163 aa14.14□□□□□ -0.15
CBWD1-216ENST00000489272 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.13□□□□□ -0.15
CBWD1-216ENST00000489272 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
CBWD1-216ENST00000489272 HS3ST6Q96QI5 342 aa14.09□□□□□ -0.15
CBWD1-216ENST00000489272 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
CBWD1-216ENST00000489272 OCEL1Q9H607 264 aa14.07□□□□□ -0.16
CBWD1-216ENST00000489272 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
CBWD1-216ENST00000489272 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
CBWD1-216ENST00000489272 PROM2Q8N271 834 aa14.01□□□□□ -0.17
CBWD1-216ENST00000489272 MIER1Q8N108 512 aa13.95□□□□□ -0.18
CBWD1-216ENST00000489272 RNF166Q96A37 237 aaPredicted RBP13.89□□□□□ -0.19
CBWD1-216ENST00000489272 C3orf67Q6ZVT6 689 aa13.86□□□□□ -0.19
CBWD1-216ENST00000489272 NUBP1P53384 320 aa13.82□□□□□ -0.2
CBWD1-216ENST00000489272 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
CBWD1-216ENST00000489272 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
CBWD1-216ENST00000489272 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
CBWD1-216ENST00000489272 FAM212AQ96EL1 285 aa13.74□□□□□ -0.21
CBWD1-216ENST00000489272 MYT1LQ9UL68 1186 aa13.74□□□□□ -0.21
CBWD1-216ENST00000489272 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
CBWD1-216ENST00000489272 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
CBWD1-216ENST00000489272 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
CBWD1-216ENST00000489272 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
CBWD1-216ENST00000489272 ERBB3P21860 1342 aa13.63□□□□□ -0.23
CBWD1-216ENST00000489272 PCDHB8Q9UN66 801 aa13.6□□□□□ -0.23
CBWD1-216ENST00000489272 MKRN3Q13064 507 aaKnown RBP13.57□□□□□ -0.24
CBWD1-216ENST00000489272 PYGBP11216 843 aa13.56□□□□□ -0.24
CBWD1-216ENST00000489272 ZNF710Q8N1W2 664 aa13.55□□□□□ -0.24
CBWD1-216ENST00000489272 PTGER2P43116 358 aa13.54□□□□□ -0.24
CBWD1-216ENST00000489272 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
CBWD1-216ENST00000489272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■■■□ 25.6
CBWD1-216ENST00000489272 VARS2Q5ST30 1063 aaKnown RBP13.51□□□□□ -0.25
CBWD1-216ENST00000489272 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
CBWD1-216ENST00000489272 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
CBWD1-216ENST00000489272 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
CBWD1-216ENST00000489272 ZNF687Q8N1G0 1237 aa13.45□□□□□ -0.26
CBWD1-216ENST00000489272 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
CBWD1-216ENST00000489272 DPY19L2Q6NUT2 758 aa13.41□□□□□ -0.26
CBWD1-216ENST00000489272 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
CBWD1-216ENST00000489272 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
CBWD1-216ENST00000489272 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
CBWD1-216ENST00000489272 G3V3G9 751 aa13.36□□□□□ -0.27
CBWD1-216ENST00000489272 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
CBWD1-216ENST00000489272 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
CBWD1-216ENST00000489272 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
CBWD1-216ENST00000489272 PSEN1P49768 467 aa13.28□□□□□ -0.28
CBWD1-216ENST00000489272 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
CBWD1-216ENST00000489272 LSM11P83369 360 aaKnown RBP eCLIP13.19□□□□□ -0.3
CBWD1-216ENST00000489272 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
CBWD1-216ENST00000489272 HCSTQ9UBK5 93 aa13.17□□□□□ -0.3
CBWD1-216ENST00000489272 GSE1Q14687 1217 aa13.13□□□□□ -0.31
CBWD1-216ENST00000489272 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
CBWD1-216ENST00000489272 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
CBWD1-216ENST00000489272 TMEM92Q6UXU6 159 aa13.09□□□□□ -0.31
CBWD1-216ENST00000489272 ZNF316A6NFI3 1004 aaPredicted RBP13.06□□□□□ -0.32
CBWD1-216ENST00000489272 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
CBWD1-216ENST00000489272 PBX2P40425 430 aa13□□□□□ -0.33
CBWD1-216ENST00000489272 KHSRPQ92945 711 aaKnown RBP eCLIP13□□□□□ -0.33
CBWD1-216ENST00000489272 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
CBWD1-216ENST00000489272 MICALL2Q8IY33 904 aa12.96□□□□□ -0.33
CBWD1-216ENST00000489272 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
CBWD1-216ENST00000489272 RGS20O76081 388 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms