RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 LHX8Q68G74 356 aa13.99□□□□□ -0.17
CACUL1-204ENST00000489169 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
CACUL1-204ENST00000489169 DCAF1Q9Y4B6 1507 aa13.94□□□□□ -0.18
CACUL1-204ENST00000489169 MIER1Q8N108 512 aa13.92□□□□□ -0.18
CACUL1-204ENST00000489169 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
CACUL1-204ENST00000489169 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
CACUL1-204ENST00000489169 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
CACUL1-204ENST00000489169 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
CACUL1-204ENST00000489169 MYO15BQ96JP2 1530 aa13.83□□□□□ -0.2
CACUL1-204ENST00000489169 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
CACUL1-204ENST00000489169 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
CACUL1-204ENST00000489169 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
CACUL1-204ENST00000489169 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
CACUL1-204ENST00000489169 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
CACUL1-204ENST00000489169 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
CACUL1-204ENST00000489169 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
CACUL1-204ENST00000489169 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
CACUL1-204ENST00000489169 NUBP1P53384 320 aa13.72□□□□□ -0.21
CACUL1-204ENST00000489169 NACADO15069 1562 aa13.68□□□□□ -0.22
CACUL1-204ENST00000489169 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
CACUL1-204ENST00000489169 MAP3K13O43283 966 aa13.67□□□□□ -0.22
CACUL1-204ENST00000489169 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
CACUL1-204ENST00000489169 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
CACUL1-204ENST00000489169 SLC39A7Q92504 469 aa13.63□□□□□ -0.23
CACUL1-204ENST00000489169 C7P10643 843 aa13.61□□□□□ -0.23
CACUL1-204ENST00000489169 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
CACUL1-204ENST00000489169 METRNQ9UJH8 293 aa13.61□□□□□ -0.23
CACUL1-204ENST00000489169 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
CACUL1-204ENST00000489169 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
CACUL1-204ENST00000489169 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
CACUL1-204ENST00000489169 BMP2KQ9NSY1 1161 aaPredicted RBP13.59□□□□□ -0.23
CACUL1-204ENST00000489169 TIE1P35590 1138 aa13.58□□□□□ -0.24
CACUL1-204ENST00000489169 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
CACUL1-204ENST00000489169 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
CACUL1-204ENST00000489169 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
CACUL1-204ENST00000489169 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
CACUL1-204ENST00000489169 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
CACUL1-204ENST00000489169 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
CACUL1-204ENST00000489169 IFNL1Q8IU54 200 aa13.47□□□□□ -0.25
CACUL1-204ENST00000489169 POTEFA5A3E0 1075 aa13.46□□□□□ -0.25
CACUL1-204ENST00000489169 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
CACUL1-204ENST00000489169 IER5LQ5T953 404 aa13.4□□□□□ -0.26
CACUL1-204ENST00000489169 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.26
CACUL1-204ENST00000489169 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
CACUL1-204ENST00000489169 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
CACUL1-204ENST00000489169 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
CACUL1-204ENST00000489169 PYGBP11216 843 aa13.37□□□□□ -0.27
CACUL1-204ENST00000489169 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
CACUL1-204ENST00000489169 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
CACUL1-204ENST00000489169 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
CACUL1-204ENST00000489169 GSE1Q14687 1217 aa13.33□□□□□ -0.28
CACUL1-204ENST00000489169 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
CACUL1-204ENST00000489169 SEC24BO95487 1268 aa13.3□□□□□ -0.28
CACUL1-204ENST00000489169 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
CACUL1-204ENST00000489169 CHRM1P11229 460 aaPredicted RBP13.29□□□□□ -0.28
CACUL1-204ENST00000489169 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
CACUL1-204ENST00000489169 CUX2O14529 1486 aa13.29□□□□□ -0.28
CACUL1-204ENST00000489169 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
CACUL1-204ENST00000489169 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
CACUL1-204ENST00000489169 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
CACUL1-204ENST00000489169 ZNF467Q7Z7K2 595 aaPredicted RBP13.23□□□□□ -0.29
CACUL1-204ENST00000489169 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
CACUL1-204ENST00000489169 PLCG2P16885 1265 aa13.18□□□□□ -0.3
CACUL1-204ENST00000489169 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
CACUL1-204ENST00000489169 POTEMA6NI47 508 aa13.15□□□□□ -0.3
CACUL1-204ENST00000489169 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
CACUL1-204ENST00000489169 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
CACUL1-204ENST00000489169 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
CACUL1-204ENST00000489169 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
CACUL1-204ENST00000489169 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
CACUL1-204ENST00000489169 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
CACUL1-204ENST00000489169 PSEN1P49768 467 aa13.09□□□□□ -0.31
CACUL1-204ENST00000489169 PDAP1Q13442 181 aaKnown RBP13.06□□□□□ -0.32
CACUL1-204ENST00000489169 PDCD7Q8N8D1 485 aaKnown RBP13.06□□□□□ -0.32
CACUL1-204ENST00000489169 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
CACUL1-204ENST00000489169 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
CACUL1-204ENST00000489169 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
CACUL1-204ENST00000489169 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
CACUL1-204ENST00000489169 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
CACUL1-204ENST00000489169 PKD2Q13563 968 aa13□□□□□ -0.33
CACUL1-204ENST00000489169 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
CACUL1-204ENST00000489169 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
CACUL1-204ENST00000489169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
CACUL1-204ENST00000489169 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
CACUL1-204ENST00000489169 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
CACUL1-204ENST00000489169 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
CACUL1-204ENST00000489169 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
CACUL1-204ENST00000489169 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
CACUL1-204ENST00000489169 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
CACUL1-204ENST00000489169 BCANQ96GW7 911 aa12.91□□□□□ -0.34
CACUL1-204ENST00000489169 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
CACUL1-204ENST00000489169 SUPT5HO00267 1087 aaKnown RBP12.9□□□□□ -0.34
CACUL1-204ENST00000489169 ST18O60284 1047 aa12.89□□□□□ -0.35
CACUL1-204ENST00000489169 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
CACUL1-204ENST00000489169 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
CACUL1-204ENST00000489169 SMARCA4P51532 1647 aa12.84□□□□□ -0.35
CACUL1-204ENST00000489169 MROH2BQ7Z745 1585 aa12.84□□□□□ -0.35
CACUL1-204ENST00000489169 SNPHO15079 494 aa12.83□□□□□ -0.36
CACUL1-204ENST00000489169 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
CACUL1-204ENST00000489169 RIOK3O14730 519 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 492 ms