RNA–Protein interactions for RNA: ENST00000488998.1

CCDC146-209, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-209ENST00000488998 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
CCDC146-209ENST00000488998 ZNF579Q8NAF0 562 aaKnown RBP9.17□□□□□ -0.94
CCDC146-209ENST00000488998 CCDC61Q9Y6R9 512 aa9.17□□□□□ -0.94
CCDC146-209ENST00000488998 CIZ1Q9ULV3 898 aaPredicted RBP9.16□□□□□ -0.94
CCDC146-209ENST00000488998 GABBR2O75899 941 aa9.15□□□□□ -0.94
CCDC146-209ENST00000488998 PYGBP11216 843 aa9.11□□□□□ -0.95
CCDC146-209ENST00000488998 GSE1Q14687 1217 aa9.11□□□□□ -0.95
CCDC146-209ENST00000488998 KIF12Q96FN5 646 aa9.1□□□□□ -0.95
CCDC146-209ENST00000488998 MAP3K13O43283 966 aa9.08□□□□□ -0.96
CCDC146-209ENST00000488998 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
CCDC146-209ENST00000488998 MS4A3Q96HJ5 214 aa9.06□□□□□ -0.96
CCDC146-209ENST00000488998 CLCN6P51797 869 aa9.04□□□□□ -0.96
CCDC146-209ENST00000488998 PCDHB13Q9Y5F0 798 aa9.04□□□□□ -0.96
CCDC146-209ENST00000488998 IFNL1Q8IU54 200 aa9.01□□□□□ -0.97
CCDC146-209ENST00000488998 PCDHB8Q9UN66 801 aa9□□□□□ -0.97
CCDC146-209ENST00000488998 TRPC6Q9Y210 931 aa9□□□□□ -0.97
CCDC146-209ENST00000488998 CHRM1P11229 460 aaPredicted RBP8.99□□□□□ -0.97
CCDC146-209ENST00000488998 DCBLD2Q96PD2 775 aa8.99□□□□□ -0.97
CCDC146-209ENST00000488998 PKD2Q13563 968 aa8.98□□□□□ -0.97
CCDC146-209ENST00000488998 SGIP1Q9BQI5 828 aa8.97□□□□□ -0.97
CCDC146-209ENST00000488998 POTEIP0CG38 1075 aa8.96□□□□□ -0.98
CCDC146-209ENST00000488998 ECM2O94769 699 aaPredicted RBP8.95□□□□□ -0.98
CCDC146-209ENST00000488998 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
CCDC146-209ENST00000488998 ZNF467Q7Z7K2 595 aaPredicted RBP8.92□□□□□ -0.98
CCDC146-209ENST00000488998 BMP2KQ9NSY1 1161 aaPredicted RBP8.91□□□□□ -0.98
CCDC146-209ENST00000488998 ATMINO43313 823 aaPredicted RBP8.9□□□□□ -0.98
CCDC146-209ENST00000488998 PELP1Q8IZL8 1130 aaKnown RBP8.9□□□□□ -0.98
CCDC146-209ENST00000488998 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.98
CCDC146-209ENST00000488998 TMEM106CQ9BVX2 250 aa8.9□□□□□ -0.98
CCDC146-209ENST00000488998 TTLL13PA6NNM8 815 aa8.88□□□□□ -0.99
CCDC146-209ENST00000488998 RIOK3O14730 519 aaKnown RBP8.88□□□□□ -0.99
CCDC146-209ENST00000488998 RGL2O15211 777 aa8.88□□□□□ -0.99
CCDC146-209ENST00000488998 TIE1P35590 1138 aa8.88□□□□□ -0.99
CCDC146-209ENST00000488998 ATN1P54259 1190 aaPredicted RBP8.88□□□□□ -0.99
CCDC146-209ENST00000488998 ASTLQ6HA08 431 aaPredicted RBP8.88□□□□□ -0.99
CCDC146-209ENST00000488998 PSEN1P49768 467 aa8.87□□□□□ -0.99
CCDC146-209ENST00000488998 PDAP1Q13442 181 aaKnown RBP8.86□□□□□ -0.99
CCDC146-209ENST00000488998 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
CCDC146-209ENST00000488998 TRIM35Q9UPQ4 493 aa8.83□□□□□ -1
CCDC146-209ENST00000488998 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
CCDC146-209ENST00000488998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
CCDC146-209ENST00000488998 ZFP91Q96JP5 570 aaPredicted RBP8.8□□□□□ -1
CCDC146-209ENST00000488998 VGFO15240 615 aaPredicted RBP8.79□□□□□ -1
CCDC146-209ENST00000488998 METRNQ9UJH8 293 aa8.78□□□□□ -1
CCDC146-209ENST00000488998 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
CCDC146-209ENST00000488998 CABP2Q9NPB3 220 aa8.77□□□□□ -1.01
CCDC146-209ENST00000488998 C7P10643 843 aa8.76□□□□□ -1.01
CCDC146-209ENST00000488998 GOLGA2Q08379 1002 aa8.76□□□□□ -1.01
CCDC146-209ENST00000488998 STK25O00506 426 aa8.75□□□□□ -1.01
CCDC146-209ENST00000488998 DCAF8L2P0C7V8 631 aa8.75□□□□□ -1.01
CCDC146-209ENST00000488998 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
CCDC146-209ENST00000488998 TAOK2Q9UL54 1235 aa8.75□□□□□ -1.01
CCDC146-209ENST00000488998 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
CCDC146-209ENST00000488998 SEC24BO95487 1268 aa8.73□□□□□ -1.01
CCDC146-209ENST00000488998 MKRN3Q13064 507 aaKnown RBP8.73□□□□□ -1.01
CCDC146-209ENST00000488998 COLQQ9Y215 455 aaPredicted RBP8.73□□□□□ -1.01
CCDC146-209ENST00000488998 POTEFA5A3E0 1075 aa8.71□□□□□ -1.02
CCDC146-209ENST00000488998 CHGAP10645 457 aaKnown RBP8.71□□□□□ -1.02
CCDC146-209ENST00000488998 IER5LQ5T953 404 aa8.71□□□□□ -1.02
CCDC146-209ENST00000488998 EFCAB3Q8N7B9 438 aa8.71□□□□□ -1.02
CCDC146-209ENST00000488998 POTEB2H3BUK9 544 aa8.7□□□□□ -1.02
CCDC146-209ENST00000488998 LHX8Q68G74 356 aa8.69□□□□□ -1.02
CCDC146-209ENST00000488998 PLCG2P16885 1265 aa8.68□□□□□ -1.02
CCDC146-209ENST00000488998 IRX5P78411 483 aaPredicted RBP8.68□□□□□ -1.02
CCDC146-209ENST00000488998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC146-209ENST00000488998 OCEL1Q9H607 264 aa8.67□□□□□ -1.02
CCDC146-209ENST00000488998 POTEJP0CG39 1038 aa8.64□□□□□ -1.03
CCDC146-209ENST00000488998 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
CCDC146-209ENST00000488998 DPY19L2Q6NUT2 758 aa8.63□□□□□ -1.03
CCDC146-209ENST00000488998 PDCD7Q8N8D1 485 aaKnown RBP8.63□□□□□ -1.03
CCDC146-209ENST00000488998 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
CCDC146-209ENST00000488998 SOX12O15370 315 aa8.61□□□□□ -1.03
CCDC146-209ENST00000488998 ILDR1Q86SU0 546 aaPredicted RBP8.59□□□□□ -1.03
CCDC146-209ENST00000488998 MFRPQ9BY79 579 aa8.59□□□□□ -1.03
CCDC146-209ENST00000488998 MS4A4AQ96JQ5 239 aa8.58□□□□□ -1.04
CCDC146-209ENST00000488998 NLRP6P59044 892 aa8.57□□□□□ -1.04
CCDC146-209ENST00000488998 NKX1-1Q15270 411 aaPredicted RBP8.57□□□□□ -1.04
CCDC146-209ENST00000488998 FBXO22Q8NEZ5 403 aa8.56□□□□□ -1.04
CCDC146-209ENST00000488998 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
CCDC146-209ENST00000488998 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
CCDC146-209ENST00000488998 MAMSTRQ6ZN01 415 aa8.52□□□□□ -1.05
CCDC146-209ENST00000488998 BOLA1Q9Y3E2 137 aa8.52□□□□□ -1.05
CCDC146-209ENST00000488998 G3V3G9 751 aa8.51□□□□□ -1.05
CCDC146-209ENST00000488998 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
CCDC146-209ENST00000488998 SCUBE2Q9NQ36 999 aa8.51□□□□□ -1.05
CCDC146-209ENST00000488998 PPP1R37O75864 691 aa8.5□□□□□ -1.05
CCDC146-209ENST00000488998 C3orf67Q6ZVT6 689 aa8.48□□□□□ -1.05
CCDC146-209ENST00000488998 MICALL2Q8IY33 904 aa8.47□□□□□ -1.05
CCDC146-209ENST00000488998 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
CCDC146-209ENST00000488998 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.47□□□□□ -1.05
CCDC146-209ENST00000488998 GTPBP6O43824 516 aaPredicted RBP8.46□□□□□ -1.06
CCDC146-209ENST00000488998 SLAIN1Q8ND83 568 aa8.46□□□□□ -1.06
CCDC146-209ENST00000488998 TMEM121BQ9BXQ6 578 aaPredicted RBP8.45□□□□□ -1.06
CCDC146-209ENST00000488998 RYDENQ9NUL5 291 aaKnown RBP8.42□□□□□ -1.06
CCDC146-209ENST00000488998 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
CCDC146-209ENST00000488998 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
CCDC146-209ENST00000488998 TMEM92Q6UXU6 159 aa8.39□□□□□ -1.07
CCDC146-209ENST00000488998 SPRYD3Q8NCJ5 442 aa8.39□□□□□ -1.07
CCDC146-209ENST00000488998 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
CCDC146-209ENST00000488998 FAM163AQ96GL9 167 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms