RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
PRPF4-203ENST00000488937 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
PRPF4-203ENST00000488937 SPNS2Q8IVW8 549 aa10.89□□□□□ -0.67
PRPF4-203ENST00000488937 CREBZFQ9NS37 354 aa10.89□□□□□ -0.67
PRPF4-203ENST00000488937 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
PRPF4-203ENST00000488937 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
PRPF4-203ENST00000488937 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
PRPF4-203ENST00000488937 ST18O60284 1047 aa10.75□□□□□ -0.69
PRPF4-203ENST00000488937 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
PRPF4-203ENST00000488937 ZBTB22O15209 634 aa10.71□□□□□ -0.69
PRPF4-203ENST00000488937 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
PRPF4-203ENST00000488937 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
PRPF4-203ENST00000488937 TMEM121BQ9BXQ6 578 aaPredicted RBP10.61□□□□□ -0.71
PRPF4-203ENST00000488937 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
PRPF4-203ENST00000488937 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
PRPF4-203ENST00000488937 BMP2KQ9NSY1 1161 aaPredicted RBP10.58□□□□□ -0.72
PRPF4-203ENST00000488937 COLQQ9Y215 455 aaPredicted RBP10.57□□□□□ -0.72
PRPF4-203ENST00000488937 SEC24BO95487 1268 aa10.56□□□□□ -0.72
PRPF4-203ENST00000488937 TIE1P35590 1138 aa10.51□□□□□ -0.73
PRPF4-203ENST00000488937 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
PRPF4-203ENST00000488937 IER5LQ5T953 404 aa10.45□□□□□ -0.74
PRPF4-203ENST00000488937 TRPC6Q9Y210 931 aa10.45□□□□□ -0.74
PRPF4-203ENST00000488937 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
PRPF4-203ENST00000488937 MARVELD3Q96A59 401 aa10.43□□□□□ -0.74
PRPF4-203ENST00000488937 SNPHO15079 494 aa10.42□□□□□ -0.74
PRPF4-203ENST00000488937 TTLL13PA6NNM8 815 aa10.4□□□□□ -0.74
PRPF4-203ENST00000488937 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
PRPF4-203ENST00000488937 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
PRPF4-203ENST00000488937 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
PRPF4-203ENST00000488937 MAP3K13O43283 966 aa10.32□□□□□ -0.76
PRPF4-203ENST00000488937 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
PRPF4-203ENST00000488937 EMP3P54852 163 aa10.28□□□□□ -0.76
PRPF4-203ENST00000488937 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
PRPF4-203ENST00000488937 POTEB3A0JP26 581 aa10.24□□□□□ -0.77
PRPF4-203ENST00000488937 PLCG2P16885 1265 aa10.24□□□□□ -0.77
PRPF4-203ENST00000488937 POTEBQ6S5H4 581 aa10.24□□□□□ -0.77
PRPF4-203ENST00000488937 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
PRPF4-203ENST00000488937 RNF166Q96A37 237 aaPredicted RBP10.19□□□□□ -0.78
PRPF4-203ENST00000488937 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
PRPF4-203ENST00000488937 SGIP1Q9BQI5 828 aa10.17□□□□□ -0.78
PRPF4-203ENST00000488937 IRX5P78411 483 aaPredicted RBP10.16□□□□□ -0.78
PRPF4-203ENST00000488937 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
PRPF4-203ENST00000488937 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
PRPF4-203ENST00000488937 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
PRPF4-203ENST00000488937 TMEM106CQ9BVX2 250 aa10.06□□□□□ -0.8
PRPF4-203ENST00000488937 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
PRPF4-203ENST00000488937 RASEFQ8IZ41 740 aa10.03□□□□□ -0.8
PRPF4-203ENST00000488937 IFNL1Q8IU54 200 aa9.99□□□□□ -0.81
PRPF4-203ENST00000488937 C3orf67Q6ZVT6 689 aa9.96□□□□□ -0.82
PRPF4-203ENST00000488937 PTGER2P43116 358 aa9.9□□□□□ -0.82
PRPF4-203ENST00000488937 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
PRPF4-203ENST00000488937 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
PRPF4-203ENST00000488937 ERBB3P21860 1342 aa9.85□□□□□ -0.83
PRPF4-203ENST00000488937 HOXB1P14653 301 aaPredicted RBP9.85□□□□□ -0.83
PRPF4-203ENST00000488937 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
PRPF4-203ENST00000488937 HOXB3P14651 431 aaPredicted RBP9.81□□□□□ -0.84
PRPF4-203ENST00000488937 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
PRPF4-203ENST00000488937 MIER1Q8N108 512 aa9.76□□□□□ -0.85
PRPF4-203ENST00000488937 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
PRPF4-203ENST00000488937 VARS2Q5ST30 1063 aaKnown RBP9.75□□□□□ -0.85
PRPF4-203ENST00000488937 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
PRPF4-203ENST00000488937 PROM2Q8N271 834 aa9.73□□□□□ -0.85
PRPF4-203ENST00000488937 NUBP1P53384 320 aa9.7□□□□□ -0.86
PRPF4-203ENST00000488937 DOK7Q18PE1 504 aa9.7□□□□□ -0.86
PRPF4-203ENST00000488937 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
PRPF4-203ENST00000488937 MKRN3Q13064 507 aaKnown RBP9.64□□□□□ -0.87
PRPF4-203ENST00000488937 RIMBP2O15034 1052 aa9.63□□□□□ -0.87
PRPF4-203ENST00000488937 ANKRD13DQ6ZTN6 518 aa9.62□□□□□ -0.87
PRPF4-203ENST00000488937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.61□□□□□ -0.87
PRPF4-203ENST00000488937 HCSTQ9UBK5 93 aa9.61□□□□□ -0.87
PRPF4-203ENST00000488937 ZBTB47Q9UFB7 747 aaPredicted RBP9.61□□□□□ -0.87
PRPF4-203ENST00000488937 GOLGA2Q08379 1002 aa9.6□□□□□ -0.87
PRPF4-203ENST00000488937 ILDR1Q86SU0 546 aaPredicted RBP9.57□□□□□ -0.88
PRPF4-203ENST00000488937 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
PRPF4-203ENST00000488937 PCDHB8Q9UN66 801 aa9.57□□□□□ -0.88
PRPF4-203ENST00000488937 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
PRPF4-203ENST00000488937 IRX2Q9BZI1 471 aaPredicted RBP9.54□□□□□ -0.88
PRPF4-203ENST00000488937 RGS20O76081 388 aa9.52□□□□□ -0.89
PRPF4-203ENST00000488937 PYGBP11216 843 aa9.52□□□□□ -0.89
PRPF4-203ENST00000488937 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.89
PRPF4-203ENST00000488937 BOLA1Q9Y3E2 137 aa9.52□□□□□ -0.89
PRPF4-203ENST00000488937 G3V3G9 751 aa9.51□□□□□ -0.89
PRPF4-203ENST00000488937 DCAF8Q5TAQ9 597 aa9.51□□□□□ -0.89
PRPF4-203ENST00000488937 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
PRPF4-203ENST00000488937 GPR153Q6NV75 609 aa9.47□□□□□ -0.89
PRPF4-203ENST00000488937 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
PRPF4-203ENST00000488937 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
PRPF4-203ENST00000488937 PBX2P40425 430 aa9.37□□□□□ -0.91
PRPF4-203ENST00000488937 ZNF316A6NFI3 1004 aaPredicted RBP9.36□□□□□ -0.91
PRPF4-203ENST00000488937 PSEN1P49768 467 aa9.33□□□□□ -0.92
PRPF4-203ENST00000488937 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
PRPF4-203ENST00000488937 IFFO2Q5TF58 517 aa9.3□□□□□ -0.92
PRPF4-203ENST00000488937 Q6ZNB5 142 aa9.26□□□□□ -0.93
PRPF4-203ENST00000488937 POTEEQ6S8J3 1075 aa9.25□□□□□ -0.93
PRPF4-203ENST00000488937 TMEM92Q6UXU6 159 aa9.25□□□□□ -0.93
PRPF4-203ENST00000488937 ADGRD1Q6QNK2 874 aa9.24□□□□□ -0.93
PRPF4-203ENST00000488937 A0A0G2JS52 829 aa9.21□□□□□ -0.94
PRPF4-203ENST00000488937 CHRM1P11229 460 aaPredicted RBP9.21□□□□□ -0.94
PRPF4-203ENST00000488937 CABP2Q9NPB3 220 aa9.21□□□□□ -0.94
PRPF4-203ENST00000488937 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms