RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
CCDC93-209ENST00000488908 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
CCDC93-209ENST00000488908 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
CCDC93-209ENST00000488908 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
CCDC93-209ENST00000488908 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
CCDC93-209ENST00000488908 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
CCDC93-209ENST00000488908 C7P10643 843 aa11.37□□□□□ -0.59
CCDC93-209ENST00000488908 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
CCDC93-209ENST00000488908 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
CCDC93-209ENST00000488908 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
CCDC93-209ENST00000488908 MAP3K13O43283 966 aa11.3□□□□□ -0.6
CCDC93-209ENST00000488908 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
CCDC93-209ENST00000488908 FKBP8Q14318 412 aa11.29□□□□□ -0.6
CCDC93-209ENST00000488908 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
CCDC93-209ENST00000488908 TIE1P35590 1138 aa11.26□□□□□ -0.61
CCDC93-209ENST00000488908 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
CCDC93-209ENST00000488908 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
CCDC93-209ENST00000488908 NUBP1P53384 320 aa11.22□□□□□ -0.61
CCDC93-209ENST00000488908 SGIP1Q9BQI5 828 aa11.22□□□□□ -0.61
CCDC93-209ENST00000488908 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
CCDC93-209ENST00000488908 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
CCDC93-209ENST00000488908 FAM212AQ96EL1 285 aa11.19□□□□□ -0.62
CCDC93-209ENST00000488908 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
CCDC93-209ENST00000488908 TTLL13PA6NNM8 815 aa11.18□□□□□ -0.62
CCDC93-209ENST00000488908 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
CCDC93-209ENST00000488908 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
CCDC93-209ENST00000488908 POTEMA6NI47 508 aa11.14□□□□□ -0.63
CCDC93-209ENST00000488908 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
CCDC93-209ENST00000488908 SEC24BO95487 1268 aa11.13□□□□□ -0.63
CCDC93-209ENST00000488908 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
CCDC93-209ENST00000488908 IER5LQ5T953 404 aa11.11□□□□□ -0.63
CCDC93-209ENST00000488908 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
CCDC93-209ENST00000488908 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
CCDC93-209ENST00000488908 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
CCDC93-209ENST00000488908 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
CCDC93-209ENST00000488908 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
CCDC93-209ENST00000488908 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
CCDC93-209ENST00000488908 PYGBP11216 843 aa11.01□□□□□ -0.65
CCDC93-209ENST00000488908 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
CCDC93-209ENST00000488908 PLCG2P16885 1265 aa10.98□□□□□ -0.65
CCDC93-209ENST00000488908 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
CCDC93-209ENST00000488908 VASPP50552 380 aaPredicted RBP10.97□□□□□ -0.65
CCDC93-209ENST00000488908 LCE2DQ5TA82 110 aaPredicted RBP10.97□□□□□ -0.65
CCDC93-209ENST00000488908 GSE1Q14687 1217 aa10.94□□□□□ -0.66
CCDC93-209ENST00000488908 IRX5P78411 483 aaPredicted RBP10.93□□□□□ -0.66
CCDC93-209ENST00000488908 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
CCDC93-209ENST00000488908 SLAIN1Q8ND83 568 aa10.91□□□□□ -0.66
CCDC93-209ENST00000488908 OCEL1Q9H607 264 aa10.91□□□□□ -0.66
CCDC93-209ENST00000488908 ZNF467Q7Z7K2 595 aaPredicted RBP10.89□□□□□ -0.67
CCDC93-209ENST00000488908 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
CCDC93-209ENST00000488908 GOLGA2Q08379 1002 aa10.83□□□□□ -0.68
CCDC93-209ENST00000488908 MKRN3Q13064 507 aaKnown RBP10.8□□□□□ -0.68
CCDC93-209ENST00000488908 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.8□□□□□ -0.68
CCDC93-209ENST00000488908 ST18O60284 1047 aa10.78□□□□□ -0.68
CCDC93-209ENST00000488908 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
CCDC93-209ENST00000488908 PSEN1P49768 467 aa10.76□□□□□ -0.69
CCDC93-209ENST00000488908 SNPHO15079 494 aa10.75□□□□□ -0.69
CCDC93-209ENST00000488908 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
CCDC93-209ENST00000488908 PDCD7Q8N8D1 485 aaKnown RBP10.75□□□□□ -0.69
CCDC93-209ENST00000488908 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
CCDC93-209ENST00000488908 L3MBTL3Q96JM7 780 aaPredicted RBP10.73□□□□□ -0.69
CCDC93-209ENST00000488908 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
CCDC93-209ENST00000488908 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
CCDC93-209ENST00000488908 C3orf67Q6ZVT6 689 aa10.72□□□□□ -0.69
CCDC93-209ENST00000488908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.72□□□□□ -0.694e-8■■□□□ 13.1
CCDC93-209ENST00000488908 TMEM121BQ9BXQ6 578 aaPredicted RBP10.71□□□□□ -0.69
CCDC93-209ENST00000488908 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
CCDC93-209ENST00000488908 CABP2Q9NPB3 220 aa10.64□□□□□ -0.71
CCDC93-209ENST00000488908 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
CCDC93-209ENST00000488908 G3V3G9 751 aa10.6□□□□□ -0.71
CCDC93-209ENST00000488908 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
CCDC93-209ENST00000488908 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
CCDC93-209ENST00000488908 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
CCDC93-209ENST00000488908 EMP3P54852 163 aa10.54□□□□□ -0.72
CCDC93-209ENST00000488908 EFCAB3Q8N7B9 438 aa10.49□□□□□ -0.73
CCDC93-209ENST00000488908 SPNS2Q8IVW8 549 aa10.48□□□□□ -0.73
CCDC93-209ENST00000488908 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
CCDC93-209ENST00000488908 HS3ST6Q96QI5 342 aa10.46□□□□□ -0.73
CCDC93-209ENST00000488908 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
CCDC93-209ENST00000488908 RIOK3O14730 519 aaKnown RBP10.45□□□□□ -0.74
CCDC93-209ENST00000488908 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
CCDC93-209ENST00000488908 HOXB3P14651 431 aaPredicted RBP10.42□□□□□ -0.74
CCDC93-209ENST00000488908 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
CCDC93-209ENST00000488908 VGFO15240 615 aaPredicted RBP10.41□□□□□ -0.74
CCDC93-209ENST00000488908 SOX12O15370 315 aa10.41□□□□□ -0.74
CCDC93-209ENST00000488908 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
CCDC93-209ENST00000488908 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
CCDC93-209ENST00000488908 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
CCDC93-209ENST00000488908 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.39□□□□□ -0.75
CCDC93-209ENST00000488908 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
CCDC93-209ENST00000488908 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
CCDC93-209ENST00000488908 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
CCDC93-209ENST00000488908 MICALL2Q8IY33 904 aa10.38□□□□□ -0.75
CCDC93-209ENST00000488908 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
CCDC93-209ENST00000488908 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
CCDC93-209ENST00000488908 MS4A4AQ96JQ5 239 aa10.33□□□□□ -0.76
CCDC93-209ENST00000488908 TAOK2Q9UL54 1235 aa10.33□□□□□ -0.76
CCDC93-209ENST00000488908 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
CCDC93-209ENST00000488908 ERBB3P21860 1342 aa10.33□□□□□ -0.76
CCDC93-209ENST00000488908 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms