RNA–Protein interactions for RNA: ENST00000488729.5

KIDINS220-208, Transcript of kinase D interacting substrate 220, humanhuman

TSL 1 (best)

Gene KIDINS220, Length 5,988 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIDINS220-208ENST00000488729 PATL2C9JE40 543 aaKnown RBP8.15□□□□□ -1.1
KIDINS220-208ENST00000488729 USP35Q9P2H5 1018 aa8.14□□□□□ -1.11
KIDINS220-208ENST00000488729 LAS1LQ9Y4W2 734 aaKnown RBP8.12□□□□□ -1.11
KIDINS220-208ENST00000488729 TAF7LQ5H9L4 462 aa8.11□□□□□ -1.11
KIDINS220-208ENST00000488729 ZNF526Q8TF50 670 aaPredicted RBP8.09□□□□□ -1.11
KIDINS220-208ENST00000488729 ANP32CO43423 234 aa8.09□□□□□ -1.11
KIDINS220-208ENST00000488729 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
KIDINS220-208ENST00000488729 RBM19Q9Y4C8 960 aaKnown RBP8.08□□□□□ -1.12
KIDINS220-208ENST00000488729 PTMAP06454 111 aaKnown RBP8.06□□□□□ -1.12
KIDINS220-208ENST00000488729 PAXIP1Q6ZW49 1069 aaPredicted RBP8.06□□□□□ -1.12
KIDINS220-208ENST00000488729 SCRIBQ14160 1630 aa8.06□□□□□ -1.12
KIDINS220-208ENST00000488729 L1TD1Q5T7N2 865 aaKnown RBP8.05□□□□□ -1.12
KIDINS220-208ENST00000488729 UPF2Q9HAU5 1272 aaKnown RBP8.05□□□□□ -1.12
KIDINS220-208ENST00000488729 SUPT16HQ9Y5B9 1047 aaKnown RBP8.04□□□□□ -1.12
KIDINS220-208ENST00000488729 MSNP26038 577 aaKnown RBP8.04□□□□□ -1.12
KIDINS220-208ENST00000488729 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
KIDINS220-208ENST00000488729 NCBP3Q53F19 620 aaKnown RBP8.02□□□□□ -1.13
KIDINS220-208ENST00000488729 PABPN1Q86U42 306 aaKnown RBP eCLIP8□□□□□ -1.13
KIDINS220-208ENST00000488729 ZMYND15Q9H091 742 aa8□□□□□ -1.13
KIDINS220-208ENST00000488729 BCL11BQ9C0K0 894 aaPredicted RBP8□□□□□ -1.13
KIDINS220-208ENST00000488729 HNRNPUL2Q1KMD3 747 aaKnown RBP8□□□□□ -1.13
KIDINS220-208ENST00000488729 IRX6P78412 446 aaPredicted RBP7.99□□□□□ -1.13
KIDINS220-208ENST00000488729 CHAF1AQ13111 956 aaPredicted RBP7.98□□□□□ -1.13
KIDINS220-208ENST00000488729 ZNF771Q7L3S4 317 aaPredicted RBP7.98□□□□□ -1.13
KIDINS220-208ENST00000488729 CCDC9Q9Y3X0 531 aaKnown RBP7.98□□□□□ -1.13
KIDINS220-208ENST00000488729 HMGB1P09429 215 aaKnown RBP7.97□□□□□ -1.13
KIDINS220-208ENST00000488729 BBXQ8WY36 941 aaPredicted RBP7.97□□□□□ -1.13
KIDINS220-208ENST00000488729 KLHL34Q8N239 644 aa7.97□□□□□ -1.13
KIDINS220-208ENST00000488729 BECN1Q14457 450 aa7.96□□□□□ -1.13
KIDINS220-208ENST00000488729 CHIC1Q5VXU3 224 aa7.96□□□□□ -1.13
KIDINS220-208ENST00000488729 LOC105371045A0A1W2PR82 267 aa7.95□□□□□ -1.14
KIDINS220-208ENST00000488729 GOLGA6L22H0YM25 854 aa7.95□□□□□ -1.14
KIDINS220-208ENST00000488729 RBM10P98175 930 aaKnown RBP7.95□□□□□ -1.14
KIDINS220-208ENST00000488729 TRIM41Q8WV44 630 aa7.95□□□□□ -1.14
KIDINS220-208ENST00000488729 MIER1Q8N108 512 aa7.95□□□□□ -1.14
KIDINS220-208ENST00000488729 BRD2P25440 801 aaKnown RBP7.94□□□□□ -1.14
KIDINS220-208ENST00000488729 TPRNQ4KMQ1 711 aa7.94□□□□□ -1.14
KIDINS220-208ENST00000488729 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
KIDINS220-208ENST00000488729 HNRNPUQ00839 825 aaKnown RBP eCLIP7.93□□□□□ -1.14
KIDINS220-208ENST00000488729 SETQ01105 290 aaPredicted RBP7.92□□□□□ -1.14
KIDINS220-208ENST00000488729 AEBP1Q8IUX7 1158 aa7.92□□□□□ -1.14
KIDINS220-208ENST00000488729 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
KIDINS220-208ENST00000488729 TRIM52Q96A61 297 aa7.92□□□□□ -1.14
KIDINS220-208ENST00000488729 GOLGA6L6A8MZA4 724 aa7.91□□□□□ -1.14
KIDINS220-208ENST00000488729 IL27Q8NEV9 243 aa7.91□□□□□ -1.14
KIDINS220-208ENST00000488729 MEX3CQ5U5Q3 659 aaKnown RBP7.91□□□□□ -1.14
KIDINS220-208ENST00000488729 GOLGA6L3A6NEY3 463 aa7.9□□□□□ -1.14
KIDINS220-208ENST00000488729 PLPPR3Q6T4P5 718 aa7.9□□□□□ -1.14
KIDINS220-208ENST00000488729 DHX37Q8IY37 1157 aaKnown RBP7.9□□□□□ -1.14
KIDINS220-208ENST00000488729 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.14
KIDINS220-208ENST00000488729 FAM13BQ9NYF5 915 aa7.9□□□□□ -1.15
KIDINS220-208ENST00000488729 ZBTB7CA1YPR0 619 aa7.9□□□□□ -1.15
KIDINS220-208ENST00000488729 WWC1Q8IX03 1113 aa7.89□□□□□ -1.15
KIDINS220-208ENST00000488729 STK11IPQ8N1F8 1099 aa7.88□□□□□ -1.15
KIDINS220-208ENST00000488729 RRP9O43818 475 aaKnown RBP7.88□□□□□ -1.15
KIDINS220-208ENST00000488729 UBTFP17480 764 aaKnown RBP7.87□□□□□ -1.15
KIDINS220-208ENST00000488729 NAP1L2Q9ULW6 460 aaPredicted RBP7.87□□□□□ -1.15
KIDINS220-208ENST00000488729 CC2D1BQ5T0F9 858 aaKnown RBP7.86□□□□□ -1.15
KIDINS220-208ENST00000488729 IRX3P78415 501 aaPredicted RBP7.85□□□□□ -1.15
KIDINS220-208ENST00000488729 OS9Q13438 667 aaPredicted RBP7.85□□□□□ -1.15
KIDINS220-208ENST00000488729 PLCD3Q8N3E9 789 aa7.84□□□□□ -1.15
KIDINS220-208ENST00000488729 MAP7D2Q96T17 732 aa7.84□□□□□ -1.15
KIDINS220-208ENST00000488729 PLCB2Q00722 1185 aa7.84□□□□□ -1.15
KIDINS220-208ENST00000488729 GSE1Q14687 1217 aa7.84□□□□□ -1.15
KIDINS220-208ENST00000488729 NEFHP12036 1026 aa7.84□□□□□ -1.16
KIDINS220-208ENST00000488729 TAF3Q5VWG9 929 aa7.84□□□□□ -1.16
KIDINS220-208ENST00000488729 CCDC66A2RUB6 948 aa7.82□□□□□ -1.16
KIDINS220-208ENST00000488729 UNC13AQ9UPW8 1703 aa7.82□□□□□ -1.16
KIDINS220-208ENST00000488729 E9PSI1 815 aa7.82□□□□□ -1.16
KIDINS220-208ENST00000488729 CHMP4AQ9BY43 222 aa7.82□□□□□ -1.16
KIDINS220-208ENST00000488729 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
KIDINS220-208ENST00000488729 KIAA2012Q0VF49 1180 aa7.81□□□□□ -1.16
KIDINS220-208ENST00000488729 CHMP4BQ9H444 224 aaKnown RBP7.81□□□□□ -1.16
KIDINS220-208ENST00000488729 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
KIDINS220-208ENST00000488729 FGD1P98174 961 aa7.81□□□□□ -1.16
KIDINS220-208ENST00000488729 MTERF4Q7Z6M4 381 aaKnown RBP7.8□□□□□ -1.16
KIDINS220-208ENST00000488729 NOM1Q5C9Z4 860 aaKnown RBP7.8□□□□□ -1.16
KIDINS220-208ENST00000488729 CFAP44Q96MT7 982 aa7.8□□□□□ -1.16
KIDINS220-208ENST00000488729 IPO9Q96P70 1041 aaKnown RBP7.8□□□□□ -1.16
KIDINS220-208ENST00000488729 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
KIDINS220-208ENST00000488729 MYH16Q9H6N6 1097 aa7.79□□□□□ -1.16
KIDINS220-208ENST00000488729 TPM2P07951 284 aa7.78□□□□□ -1.16
KIDINS220-208ENST00000488729 FAM9BQ8IZU0 186 aa7.77□□□□□ -1.17
KIDINS220-208ENST00000488729 PLCD4Q9BRC7 762 aa7.77□□□□□ -1.17
KIDINS220-208ENST00000488729 PSMD1Q99460 953 aa7.76□□□□□ -1.17
KIDINS220-208ENST00000488729 BICRAQ9NZM4 1560 aa7.76□□□□□ -1.17
KIDINS220-208ENST00000488729 BRPF3Q9ULD4 1205 aa7.76□□□□□ -1.17
KIDINS220-208ENST00000488729 FAM43AQ8N2R8 423 aa7.76□□□□□ -1.17
KIDINS220-208ENST00000488729 FAM193AP78312 1265 aa7.75□□□□□ -1.17
KIDINS220-208ENST00000488729 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.75□□□□□ -1.17
KIDINS220-208ENST00000488729 FANCIQ9NVI1 1328 aa7.75□□□□□ -1.17
KIDINS220-208ENST00000488729 BAZ1AQ9NRL2 1556 aaPredicted RBP7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 TNNT1P13805 278 aa7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 B4GALNT3Q6L9W6 998 aa7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 ZHX1Q9UKY1 873 aaPredicted RBP7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 NRDCO43847 1150 aa7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 SSR1P43307 286 aaKnown RBP7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 RBM25P49756 843 aaKnown RBP7.74□□□□□ -1.17
KIDINS220-208ENST00000488729 DDX10Q13206 875 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms