RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 ATMINO43313 823 aaPredicted RBP5.58□□□□□ -1.52
LBR-208ENST00000488632 RASEFQ8IZ41 740 aa5.58□□□□□ -1.52
LBR-208ENST00000488632 KIF12Q96FN5 646 aa5.58□□□□□ -1.52
LBR-208ENST00000488632 POTEB2H3BUK9 544 aa5.57□□□□□ -1.52
LBR-208ENST00000488632 FKBP8Q14318 412 aa5.57□□□□□ -1.52
LBR-208ENST00000488632 SLC39A7Q92504 469 aa5.57□□□□□ -1.52
LBR-208ENST00000488632 METRNQ9UJH8 293 aa5.57□□□□□ -1.52
LBR-208ENST00000488632 PLCD3Q8N3E9 789 aa5.56□□□□□ -1.52
LBR-208ENST00000488632 OTUD5Q96G74 571 aa5.56□□□□□ -1.52
LBR-208ENST00000488632 ZBTB47Q9UFB7 747 aaPredicted RBP5.56□□□□□ -1.52
LBR-208ENST00000488632 C7P10643 843 aa5.54□□□□□ -1.52
LBR-208ENST00000488632 ATN1P54259 1190 aaPredicted RBP5.54□□□□□ -1.52
LBR-208ENST00000488632 BMP2KQ9NSY1 1161 aaPredicted RBP5.54□□□□□ -1.52
LBR-208ENST00000488632 MAP3K13O43283 966 aa5.53□□□□□ -1.52
LBR-208ENST00000488632 TIE1P35590 1138 aa5.52□□□□□ -1.53
LBR-208ENST00000488632 NUBP1P53384 320 aa5.52□□□□□ -1.53
LBR-208ENST00000488632 TRPC6Q9Y210 931 aa5.52□□□□□ -1.53
LBR-208ENST00000488632 FAM212AQ96EL1 285 aa5.5□□□□□ -1.53
LBR-208ENST00000488632 SGIP1Q9BQI5 828 aa5.5□□□□□ -1.53
LBR-208ENST00000488632 POTEJP0CG39 1038 aa5.49□□□□□ -1.53
LBR-208ENST00000488632 TTLL13PA6NNM8 815 aa5.48□□□□□ -1.53
LBR-208ENST00000488632 MAMSTRQ6ZN01 415 aa5.48□□□□□ -1.53
LBR-208ENST00000488632 PCDHB13Q9Y5F0 798 aa5.48□□□□□ -1.53
LBR-208ENST00000488632 POTEFA5A3E0 1075 aa5.47□□□□□ -1.53
LBR-208ENST00000488632 FBXO3Q9UK99 471 aa5.47□□□□□ -1.53
LBR-208ENST00000488632 SCUBE2Q9NQ36 999 aa5.46□□□□□ -1.54
LBR-208ENST00000488632 IER5LQ5T953 404 aa5.45□□□□□ -1.54
LBR-208ENST00000488632 IFNL1Q8IU54 200 aa5.45□□□□□ -1.54
LBR-208ENST00000488632 TRIM35Q9UPQ4 493 aa5.44□□□□□ -1.54
LBR-208ENST00000488632 POTEMA6NI47 508 aa5.43□□□□□ -1.54
LBR-208ENST00000488632 COLQQ9Y215 455 aaPredicted RBP5.43□□□□□ -1.54
LBR-208ENST00000488632 SEC24BO95487 1268 aa5.42□□□□□ -1.54
LBR-208ENST00000488632 VASPP50552 380 aaPredicted RBP5.42□□□□□ -1.54
LBR-208ENST00000488632 TMEM106CQ9BVX2 250 aa5.42□□□□□ -1.54
LBR-208ENST00000488632 POTEGQ6S5H5 508 aa5.41□□□□□ -1.54
LBR-208ENST00000488632 PYGBP11216 843 aa5.4□□□□□ -1.54
LBR-208ENST00000488632 DCAF8Q5TAQ9 597 aa5.4□□□□□ -1.54
LBR-208ENST00000488632 LCE2DQ5TA82 110 aaPredicted RBP5.39□□□□□ -1.55
LBR-208ENST00000488632 PLSCR2Q9NRY7 297 aa5.38□□□□□ -1.55
LBR-208ENST00000488632 PLCG2P16885 1265 aa5.37□□□□□ -1.55
LBR-208ENST00000488632 IRX5P78411 483 aaPredicted RBP5.37□□□□□ -1.55
LBR-208ENST00000488632 GSE1Q14687 1217 aa5.37□□□□□ -1.55
LBR-208ENST00000488632 KLHL34Q8N239 644 aa5.36□□□□□ -1.55
LBR-208ENST00000488632 ZNF467Q7Z7K2 595 aaPredicted RBP5.35□□□□□ -1.55
LBR-208ENST00000488632 PCDHB8Q9UN66 801 aa5.35□□□□□ -1.55
LBR-208ENST00000488632 NISCHQ9Y2I1 1504 aa5.34□□□□□ -1.55
LBR-208ENST00000488632 PCDH10Q9P2E7 1040 aa5.34□□□□□ -1.55
LBR-208ENST00000488632 CHRM1P11229 460 aaPredicted RBP5.33□□□□□ -1.56
LBR-208ENST00000488632 FAM163AQ96GL9 167 aaPredicted RBP5.33□□□□□ -1.56
LBR-208ENST00000488632 OCEL1Q9H607 264 aa5.33□□□□□ -1.56
LBR-208ENST00000488632 SLAIN1Q8ND83 568 aa5.32□□□□□ -1.56
LBR-208ENST00000488632 IFNLR1Q8IU57 520 aaPredicted RBP5.3□□□□□ -1.56
LBR-208ENST00000488632 PDCD7Q8N8D1 485 aaKnown RBP5.3□□□□□ -1.56
LBR-208ENST00000488632 SPOCK2Q92563 424 aa5.3□□□□□ -1.56
LBR-208ENST00000488632 PSEN1P49768 467 aa5.29□□□□□ -1.56
LBR-208ENST00000488632 GOLGA2Q08379 1002 aa5.28□□□□□ -1.56
LBR-208ENST00000488632 MKRN3Q13064 507 aaKnown RBP5.27□□□□□ -1.57
LBR-208ENST00000488632 PDAP1Q13442 181 aaKnown RBP5.27□□□□□ -1.57
LBR-208ENST00000488632 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.27□□□□□ -1.57
LBR-208ENST00000488632 ST18O60284 1047 aa5.26□□□□□ -1.57
LBR-208ENST00000488632 C3orf67Q6ZVT6 689 aa5.25□□□□□ -1.57
LBR-208ENST00000488632 ILDR1Q86SU0 546 aaPredicted RBP5.25□□□□□ -1.57
LBR-208ENST00000488632 CIZ1Q9ULV3 898 aaPredicted RBP5.25□□□□□ -1.57
LBR-208ENST00000488632 TMEM121BQ9BXQ6 578 aaPredicted RBP5.24□□□□□ -1.57
LBR-208ENST00000488632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.24□□□□□ -1.57
LBR-208ENST00000488632 SNPHO15079 494 aa5.23□□□□□ -1.57
LBR-208ENST00000488632 TRIM41Q8WV44 630 aa5.23□□□□□ -1.57
LBR-208ENST00000488632 L3MBTL3Q96JM7 780 aaPredicted RBP5.23□□□□□ -1.57
LBR-208ENST00000488632 CDAN1Q8IWY9 1227 aa5.22□□□□□ -1.57
LBR-208ENST00000488632 CABP2Q9NPB3 220 aa5.22□□□□□ -1.57
LBR-208ENST00000488632 DPY19L2Q6NUT2 758 aa5.18□□□□□ -1.58
LBR-208ENST00000488632 BOLA1Q9Y3E2 137 aa5.18□□□□□ -1.58
LBR-208ENST00000488632 G3V3G9 751 aa5.17□□□□□ -1.58
LBR-208ENST00000488632 AMER1Q5JTC6 1135 aaPredicted RBP5.17□□□□□ -1.58
LBR-208ENST00000488632 MARVELD3Q96A59 401 aa5.17□□□□□ -1.58
LBR-208ENST00000488632 RNF25Q96BH1 459 aaPredicted RBP5.16□□□□□ -1.58
LBR-208ENST00000488632 RIOK3O14730 519 aaKnown RBP5.15□□□□□ -1.59
LBR-208ENST00000488632 EMP3P54852 163 aa5.15□□□□□ -1.59
LBR-208ENST00000488632 EFCAB3Q8N7B9 438 aa5.15□□□□□ -1.59
LBR-208ENST00000488632 VGFO15240 615 aaPredicted RBP5.13□□□□□ -1.59
LBR-208ENST00000488632 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.12□□□□□ -1.59
LBR-208ENST00000488632 HOXB3P14651 431 aaPredicted RBP5.12□□□□□ -1.59
LBR-208ENST00000488632 ZFP91Q96JP5 570 aaPredicted RBP5.12□□□□□ -1.59
LBR-208ENST00000488632 SPNS2Q8IVW8 549 aa5.11□□□□□ -1.59
LBR-208ENST00000488632 MICALL2Q8IY33 904 aa5.11□□□□□ -1.59
LBR-208ENST00000488632 HS3ST6Q96QI5 342 aa5.11□□□□□ -1.59
LBR-208ENST00000488632 POTEB3A0JP26 581 aa5.1□□□□□ -1.59
LBR-208ENST00000488632 SOX12O15370 315 aa5.1□□□□□ -1.59
LBR-208ENST00000488632 MMRN1Q13201 1228 aa5.1□□□□□ -1.59
LBR-208ENST00000488632 DOK7Q18PE1 504 aa5.1□□□□□ -1.59
LBR-208ENST00000488632 POTEBQ6S5H4 581 aa5.1□□□□□ -1.59
LBR-208ENST00000488632 MS4A4AQ96JQ5 239 aa5.1□□□□□ -1.59
LBR-208ENST00000488632 FAM205CA6NFA0 338 aa5.09□□□□□ -1.59
LBR-208ENST00000488632 KRTAP3-3Q9BYR6 98 aa5.09□□□□□ -1.59
LBR-208ENST00000488632 KRTAP3-2Q9BYR7 98 aa5.09□□□□□ -1.59
LBR-208ENST00000488632 RTN4Q9NQC3 1192 aaKnown RBP5.09□□□□□ -1.59
LBR-208ENST00000488632 HOXB1P14653 301 aaPredicted RBP5.08□□□□□ -1.6
LBR-208ENST00000488632 TMEM92Q6UXU6 159 aa5.08□□□□□ -1.6
LBR-208ENST00000488632 ZNF710Q8N1W2 664 aa5.08□□□□□ -1.6
LBR-208ENST00000488632 PHF8Q9UPP1 1060 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms