RNA–Protein interactions for RNA: ENST00000488352.2

DMTF1-223, Transcript of cyclin D binding myb like transcription factor 1, human

TSL 1 (best)

Gene DMTF1, Length 2,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMTF1-223	ENST00000488352	BCAN	Q96GW7	911 aa		11.19	□□□□□ -0.62
DMTF1-223	ENST00000488352	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.18	□□□□□ -0.62
DMTF1-223	ENST00000488352	SPRYD3	Q8NCJ5	442 aa		11.17	□□□□□ -0.62
DMTF1-223	ENST00000488352	CLEC11A	Q9Y240	323 aa		11.16	□□□□□ -0.62
DMTF1-223	ENST00000488352	NUBP1	P53384	320 aa		11.11	□□□□□ -0.63
DMTF1-223	ENST00000488352	TAOK2	Q9UL54	1235 aa		11.1	□□□□□ -0.63
DMTF1-223	ENST00000488352	BICRA	Q9NZM4	1560 aa		11.1	□□□□□ -0.63
DMTF1-223	ENST00000488352	DCAF8	Q5TAQ9	597 aa		11.08	□□□□□ -0.64
DMTF1-223	ENST00000488352	UNC13A	Q9UPW8	1703 aa		11.07	□□□□□ -0.64
DMTF1-223	ENST00000488352	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.06	□□□□□ -0.64
DMTF1-223	ENST00000488352	CREBZF	Q9NS37	354 aa		11.05	□□□□□ -0.64
DMTF1-223	ENST00000488352	HS6ST3	Q8IZP7	471 aa		11.04	□□□□□ -0.64
DMTF1-223	ENST00000488352	PRR29	P0C7W0	189 aa		11.04	□□□□□ -0.64
DMTF1-223	ENST00000488352	MNX1	P50219	401 aa	Predicted RBP	11.03	□□□□□ -0.64
DMTF1-223	ENST00000488352	NKX1-1	Q15270	411 aa	Predicted RBP	11.03	□□□□□ -0.64
DMTF1-223	ENST00000488352	GSE1	Q14687	1217 aa		11.03	□□□□□ -0.64
DMTF1-223	ENST00000488352	REM2	Q8IYK8	340 aa	Predicted RBP	11.02	□□□□□ -0.65
DMTF1-223	ENST00000488352	RASEF	Q8IZ41	740 aa		11.01	□□□□□ -0.65
DMTF1-223	ENST00000488352	AKT1S1	Q96B36	256 aa		11.01	□□□□□ -0.65
DMTF1-223	ENST00000488352	TPRN	Q4KMQ1	711 aa		11	□□□□□ -0.65
DMTF1-223	ENST00000488352	TRIM41	Q8WV44	630 aa		11	□□□□□ -0.65
DMTF1-223	ENST00000488352	SCRIB	Q14160	1630 aa		10.99	□□□□□ -0.65
DMTF1-223	ENST00000488352	RIOK3	O14730	519 aa	Known RBP	10.98	□□□□□ -0.65
DMTF1-223	ENST00000488352	RBM42	Q9BTD8	480 aa	Known RBP	10.98	□□□□□ -0.65
DMTF1-223	ENST00000488352	STK25	O00506	426 aa		10.97	□□□□□ -0.65
DMTF1-223	ENST00000488352	FAM212A	Q96EL1	285 aa		10.97	□□□□□ -0.65
DMTF1-223	ENST00000488352	PYGB	P11216	843 aa		10.95	□□□□□ -0.66
DMTF1-223	ENST00000488352	PITPNM1	O00562	1244 aa		10.92	□□□□□ -0.66
DMTF1-223	ENST00000488352	GTPBP6	O43824	516 aa	Predicted RBP	10.91	□□□□□ -0.66
DMTF1-223	ENST00000488352	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.89	□□□□□ -0.67
DMTF1-223	ENST00000488352	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.88	□□□□□ -0.67
DMTF1-223	ENST00000488352	CHADL	Q6NUI6	762 aa		10.88	□□□□□ -0.67
DMTF1-223	ENST00000488352	ZFP91	Q96JP5	570 aa	Predicted RBP	10.88	□□□□□ -0.67
DMTF1-223	ENST00000488352	STK24	Q9Y6E0	443 aa		10.87	□□□□□ -0.67
DMTF1-223	ENST00000488352	VGF	O15240	615 aa	Predicted RBP	10.86	□□□□□ -0.67
DMTF1-223	ENST00000488352	DNAJC5	Q9H3Z4	198 aa		10.85	□□□□□ -0.67
DMTF1-223	ENST00000488352	EIF4G1	Q04637	1599 aa	Known RBP	10.84	□□□□□ -0.67
DMTF1-223	ENST00000488352	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.82	□□□□□ -0.68
DMTF1-223	ENST00000488352	NBR1	Q14596	966 aa		10.81	□□□□□ -0.68
DMTF1-223	ENST00000488352	CHRM1	P11229	460 aa	Predicted RBP	10.79	□□□□□ -0.68
DMTF1-223	ENST00000488352	CC2D2A	Q9P2K1	1620 aa		10.74	□□□□□ -0.69
DMTF1-223	ENST00000488352	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.73	□□□□□ -0.69
DMTF1-223	ENST00000488352	PCDHB8	Q9UN66	801 aa		10.73	□□□□□ -0.69
DMTF1-223	ENST00000488352	PCDHB13	Q9Y5F0	798 aa		10.73	□□□□□ -0.69
DMTF1-223	ENST00000488352	NCAPD3	P42695	1498 aa		10.72	□□□□□ -0.69
DMTF1-223	ENST00000488352	SMARCA2	P51531	1590 aa		10.71	□□□□□ -0.7
DMTF1-223	ENST00000488352	CECR2	Q9BXF3	1484 aa		10.7	□□□□□ -0.7
DMTF1-223	ENST00000488352	PEG3	Q9GZU2	1588 aa		10.7	□□□□□ -0.7
DMTF1-223	ENST00000488352	SGIP1	Q9BQI5	828 aa		10.69	□□□□□ -0.7
DMTF1-223	ENST00000488352	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.69	□□□□□ -0.7
DMTF1-223	ENST00000488352	CADPS2	Q86UW7	1296 aa		10.67	□□□□□ -0.7
DMTF1-223	ENST00000488352	HMGXB3	Q12766	1538 aa		10.67	□□□□□ -0.7
DMTF1-223	ENST00000488352	SMARCA4	P51532	1647 aa		10.65	□□□□□ -0.7
DMTF1-223	ENST00000488352	PRKAR2A	P13861	404 aa	Known RBP	10.64	□□□□□ -0.71
DMTF1-223	ENST00000488352	ATAD2B	Q9ULI0	1458 aa		10.63	□□□□□ -0.71
DMTF1-223	ENST00000488352	CCDC61	Q9Y6R9	512 aa		10.62	□□□□□ -0.71
DMTF1-223	ENST00000488352	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.61	□□□□□ -0.71
DMTF1-223	ENST00000488352	PDAP1	Q13442	181 aa	Known RBP	10.6	□□□□□ -0.71
DMTF1-223	ENST00000488352	MFRP	Q9BY79	579 aa		10.59	□□□□□ -0.71
DMTF1-223	ENST00000488352	RYDEN	Q9NUL5	291 aa	Known RBP	10.59	□□□□□ -0.71
DMTF1-223	ENST00000488352	PSEN1	P49768	467 aa		10.57	□□□□□ -0.72
DMTF1-223	ENST00000488352	IFNL1	Q8IU54	200 aa		10.56	□□□□□ -0.72
DMTF1-223	ENST00000488352	KCNV2	Q8TDN2	545 aa		10.56	□□□□□ -0.72
DMTF1-223	ENST00000488352	PPP1R37	O75864	691 aa		10.55	□□□□□ -0.72
DMTF1-223	ENST00000488352	MAP3K13	O43283	966 aa		10.53	□□□□□ -0.72
DMTF1-223	ENST00000488352	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.52	□□□□□ -0.72
DMTF1-223	ENST00000488352	EFCAB3	Q8N7B9	438 aa		10.51	□□□□□ -0.73
DMTF1-223	ENST00000488352	CABP2	Q9NPB3	220 aa		10.51	□□□□□ -0.73
DMTF1-223	ENST00000488352	MROH2B	Q7Z745	1585 aa		10.51	□□□□□ -0.73
DMTF1-223	ENST00000488352	FXR2	P51116	673 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
DMTF1-223	ENST00000488352	ZNF579	Q8NAF0	562 aa	Known RBP	10.5	□□□□□ -0.73
DMTF1-223	ENST00000488352	WDR70	Q9NW82	654 aa		10.49	□□□□□ -0.73
DMTF1-223	ENST00000488352	PHF8	Q9UPP1	1060 aa		10.48	□□□□□ -0.73
DMTF1-223	ENST00000488352	P3H3	Q8IVL6	736 aa		10.47	□□□□□ -0.73
DMTF1-223	ENST00000488352	RSF1	Q96T23	1441 aa	Predicted RBP	10.46	□□□□□ -0.73
DMTF1-223	ENST00000488352	PIP4P2	Q8N4L2	257 aa		10.46	□□□□□ -0.73
DMTF1-223	ENST00000488352	KIF12	Q96FN5	646 aa		10.46	□□□□□ -0.73
DMTF1-223	ENST00000488352	FBXO22	Q8NEZ5	403 aa		10.45	□□□□□ -0.74
DMTF1-223	ENST00000488352	CHRDL2	Q6WN34	429 aa		10.44	□□□□□ -0.74
DMTF1-223	ENST00000488352	PAK3	O75914	559 aa	Predicted RBP	10.43	□□□□□ -0.74
DMTF1-223	ENST00000488352	PHF12	Q96QT6	1004 aa		10.42	□□□□□ -0.74
DMTF1-223	ENST00000488352	LAMC3	Q9Y6N6	1575 aa		10.42	□□□□□ -0.74
DMTF1-223	ENST00000488352	TOP2A	P11388	1531 aa	Known RBP	10.42	□□□□□ -0.74
DMTF1-223	ENST00000488352	LMOD2	Q6P5Q4	547 aa		10.4	□□□□□ -0.74
DMTF1-223	ENST00000488352	ZRANB1	Q9UGI0	708 aa		10.4	□□□□□ -0.75
DMTF1-223	ENST00000488352	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
DMTF1-223	ENST00000488352	TRPC6	Q9Y210	931 aa		10.38	□□□□□ -0.75
DMTF1-223	ENST00000488352	NLRP6	P59044	892 aa		10.37	□□□□□ -0.75
DMTF1-223	ENST00000488352	MS4A4A	Q96JQ5	239 aa		10.37	□□□□□ -0.75
DMTF1-223	ENST00000488352	CD44	P16070	742 aa	Known RBP	10.36	□□□□□ -0.75
DMTF1-223	ENST00000488352	SEMA3E	O15041	775 aa		10.36	□□□□□ -0.75
DMTF1-223	ENST00000488352	PDS5B	Q9NTI5	1447 aa		10.36	□□□□□ -0.75
DMTF1-223	ENST00000488352	NCKAP5L	Q9HCH0	1330 aa		10.35	□□□□□ -0.75
DMTF1-223	ENST00000488352	CADPS	Q9ULU8	1353 aa		10.35	□□□□□ -0.75
DMTF1-223	ENST00000488352	WIZ	O95785	1651 aa		10.33	□□□□□ -0.76
DMTF1-223	ENST00000488352	E2F4	Q16254	413 aa		10.33	□□□□□ -0.76
DMTF1-223	ENST00000488352	CUX2	O14529	1486 aa		10.33	□□□□□ -0.76
DMTF1-223	ENST00000488352	SOX12	O15370	315 aa		10.33	□□□□□ -0.76
DMTF1-223	ENST00000488352	LARP6	Q9BRS8	491 aa	Known RBP	10.32	□□□□□ -0.76
DMTF1-223	ENST00000488352	TULP1	O00294	542 aa	Predicted RBP	10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms