RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
VPS8-224ENST00000488255 GSE1Q14687 1217 aa13.9□□□□□ -0.18
VPS8-224ENST00000488255 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
VPS8-224ENST00000488255 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
VPS8-224ENST00000488255 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
VPS8-224ENST00000488255 PYGBP11216 843 aa13.85□□□□□ -0.19
VPS8-224ENST00000488255 GABBR2O75899 941 aa13.77□□□□□ -0.21
VPS8-224ENST00000488255 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
VPS8-224ENST00000488255 MAP3K13O43283 966 aa13.76□□□□□ -0.21
VPS8-224ENST00000488255 GALR2O43603 387 aaPredicted RBP13.73□□□□□ -0.21
VPS8-224ENST00000488255 PKD2Q13563 968 aa13.72□□□□□ -0.21
VPS8-224ENST00000488255 MS4A3Q96HJ5 214 aa13.72□□□□□ -0.21
VPS8-224ENST00000488255 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
VPS8-224ENST00000488255 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
VPS8-224ENST00000488255 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
VPS8-224ENST00000488255 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
VPS8-224ENST00000488255 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
VPS8-224ENST00000488255 CLCN6P51797 869 aa13.65□□□□□ -0.22
VPS8-224ENST00000488255 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
VPS8-224ENST00000488255 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
VPS8-224ENST00000488255 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
VPS8-224ENST00000488255 TRPC6Q9Y210 931 aa13.61□□□□□ -0.23
VPS8-224ENST00000488255 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
VPS8-224ENST00000488255 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
VPS8-224ENST00000488255 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
VPS8-224ENST00000488255 RGL2O15211 777 aa13.56□□□□□ -0.24
VPS8-224ENST00000488255 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
VPS8-224ENST00000488255 RIOK3O14730 519 aaKnown RBP13.52□□□□□ -0.25
VPS8-224ENST00000488255 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
VPS8-224ENST00000488255 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
VPS8-224ENST00000488255 BMP2KQ9NSY1 1161 aaPredicted RBP13.49□□□□□ -0.25
VPS8-224ENST00000488255 PSEN1P49768 467 aa13.48□□□□□ -0.25
VPS8-224ENST00000488255 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
VPS8-224ENST00000488255 TIE1P35590 1138 aa13.46□□□□□ -0.25
VPS8-224ENST00000488255 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.25
VPS8-224ENST00000488255 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
VPS8-224ENST00000488255 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
VPS8-224ENST00000488255 VGFO15240 615 aaPredicted RBP13.43□□□□□ -0.26
VPS8-224ENST00000488255 ATN1P54259 1190 aaPredicted RBP13.43□□□□□ -0.26
VPS8-224ENST00000488255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.41□□□□□ -0.26
VPS8-224ENST00000488255 ZFP91Q96JP5 570 aaPredicted RBP13.41□□□□□ -0.26
VPS8-224ENST00000488255 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
VPS8-224ENST00000488255 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
VPS8-224ENST00000488255 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
VPS8-224ENST00000488255 TRIM35Q9UPQ4 493 aa13.38□□□□□ -0.27
VPS8-224ENST00000488255 STK25O00506 426 aa13.35□□□□□ -0.27
VPS8-224ENST00000488255 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
VPS8-224ENST00000488255 CABP2Q9NPB3 220 aa13.35□□□□□ -0.27
VPS8-224ENST00000488255 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
VPS8-224ENST00000488255 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
VPS8-224ENST00000488255 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
VPS8-224ENST00000488255 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
VPS8-224ENST00000488255 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
VPS8-224ENST00000488255 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
VPS8-224ENST00000488255 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
VPS8-224ENST00000488255 C7P10643 843 aa13.23□□□□□ -0.29
VPS8-224ENST00000488255 SEC24BO95487 1268 aa13.22□□□□□ -0.29
VPS8-224ENST00000488255 HS6ST3Q8IZP7 471 aa13.2□□□□□ -0.3
VPS8-224ENST00000488255 IER5LQ5T953 404 aa13.19□□□□□ -0.3
VPS8-224ENST00000488255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
VPS8-224ENST00000488255 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
VPS8-224ENST00000488255 PLCG2P16885 1265 aa13.16□□□□□ -0.3
VPS8-224ENST00000488255 POTEFA5A3E0 1075 aa13.14□□□□□ -0.31
VPS8-224ENST00000488255 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
VPS8-224ENST00000488255 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
VPS8-224ENST00000488255 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
VPS8-224ENST00000488255 SOX12O15370 315 aa13.1□□□□□ -0.31
VPS8-224ENST00000488255 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
VPS8-224ENST00000488255 MFRPQ9BY79 579 aa13.07□□□□□ -0.32
VPS8-224ENST00000488255 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
VPS8-224ENST00000488255 NLRP6P59044 892 aa13.06□□□□□ -0.32
VPS8-224ENST00000488255 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
VPS8-224ENST00000488255 PDCD7Q8N8D1 485 aaKnown RBP13.06□□□□□ -0.32
VPS8-224ENST00000488255 LHX8Q68G74 356 aa13.04□□□□□ -0.32
VPS8-224ENST00000488255 MS4A4AQ96JQ5 239 aa13.02□□□□□ -0.33
VPS8-224ENST00000488255 FBXO22Q8NEZ5 403 aa13.01□□□□□ -0.33
VPS8-224ENST00000488255 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
VPS8-224ENST00000488255 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
VPS8-224ENST00000488255 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
VPS8-224ENST00000488255 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
VPS8-224ENST00000488255 G3V3G9 751 aa12.97□□□□□ -0.33
VPS8-224ENST00000488255 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
VPS8-224ENST00000488255 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
VPS8-224ENST00000488255 PPP1R37O75864 691 aa12.93□□□□□ -0.34
VPS8-224ENST00000488255 GTPBP6O43824 516 aaPredicted RBP12.92□□□□□ -0.34
VPS8-224ENST00000488255 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
VPS8-224ENST00000488255 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
VPS8-224ENST00000488255 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
VPS8-224ENST00000488255 RYDENQ9NUL5 291 aaKnown RBP12.89□□□□□ -0.35
VPS8-224ENST00000488255 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
VPS8-224ENST00000488255 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
VPS8-224ENST00000488255 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
VPS8-224ENST00000488255 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
VPS8-224ENST00000488255 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
VPS8-224ENST00000488255 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
VPS8-224ENST00000488255 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
VPS8-224ENST00000488255 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
VPS8-224ENST00000488255 TMEM121BQ9BXQ6 578 aaPredicted RBP12.79□□□□□ -0.36
VPS8-224ENST00000488255 TMEM92Q6UXU6 159 aa12.71□□□□□ -0.37
VPS8-224ENST00000488255 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms