RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
HFM1-208ENST00000488023 ATMINO43313 823 aaPredicted RBP10.43□□□□□ -0.74
HFM1-208ENST00000488023 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
HFM1-208ENST00000488023 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
HFM1-208ENST00000488023 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
HFM1-208ENST00000488023 MNX1P50219 401 aaPredicted RBP10.37□□□□□ -0.75
HFM1-208ENST00000488023 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
HFM1-208ENST00000488023 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
HFM1-208ENST00000488023 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
HFM1-208ENST00000488023 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
HFM1-208ENST00000488023 CDAN1Q8IWY9 1227 aa10.25□□□□□ -0.77
HFM1-208ENST00000488023 EHMT2Q96KQ7 1210 aa10.22□□□□□ -0.77
HFM1-208ENST00000488023 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
HFM1-208ENST00000488023 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
HFM1-208ENST00000488023 TSPYL2Q9H2G4 693 aaPredicted RBP10.18□□□□□ -0.78
HFM1-208ENST00000488023 CCDC61Q9Y6R9 512 aa10.17□□□□□ -0.78
HFM1-208ENST00000488023 KIF12Q96FN5 646 aa10.16□□□□□ -0.78
HFM1-208ENST00000488023 TRPC6Q9Y210 931 aa10.15□□□□□ -0.78
HFM1-208ENST00000488023 COLQQ9Y215 455 aaPredicted RBP10.12□□□□□ -0.79
HFM1-208ENST00000488023 TIE1P35590 1138 aa10.09□□□□□ -0.79
HFM1-208ENST00000488023 ST18O60284 1047 aa10.06□□□□□ -0.8
HFM1-208ENST00000488023 SEC24BO95487 1268 aa10.06□□□□□ -0.8
HFM1-208ENST00000488023 MAP3K13O43283 966 aa10.06□□□□□ -0.8
HFM1-208ENST00000488023 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
HFM1-208ENST00000488023 TTLL13PA6NNM8 815 aa10.04□□□□□ -0.8
HFM1-208ENST00000488023 SPNS2Q8IVW8 549 aa10.02□□□□□ -0.8
HFM1-208ENST00000488023 SLAIN1Q8ND83 568 aa10.01□□□□□ -0.81
HFM1-208ENST00000488023 IER5LQ5T953 404 aa9.99□□□□□ -0.81
HFM1-208ENST00000488023 TRIM35Q9UPQ4 493 aa9.96□□□□□ -0.81
HFM1-208ENST00000488023 RASEFQ8IZ41 740 aa9.93□□□□□ -0.82
HFM1-208ENST00000488023 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
HFM1-208ENST00000488023 PROM2Q8N271 834 aa9.88□□□□□ -0.83
HFM1-208ENST00000488023 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
HFM1-208ENST00000488023 PCDHB13Q9Y5F0 798 aa9.85□□□□□ -0.83
HFM1-208ENST00000488023 PLCG2P16885 1265 aa9.84□□□□□ -0.83
HFM1-208ENST00000488023 MARVELD3Q96A59 401 aa9.83□□□□□ -0.84
HFM1-208ENST00000488023 IRX5P78411 483 aaPredicted RBP9.81□□□□□ -0.84
HFM1-208ENST00000488023 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
HFM1-208ENST00000488023 SNPHO15079 494 aa9.8□□□□□ -0.84
HFM1-208ENST00000488023 IFNL1Q8IU54 200 aa9.8□□□□□ -0.84
HFM1-208ENST00000488023 MIER1Q8N108 512 aa9.8□□□□□ -0.84
HFM1-208ENST00000488023 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
HFM1-208ENST00000488023 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.74□□□□□ -0.85
HFM1-208ENST00000488023 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
HFM1-208ENST00000488023 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
HFM1-208ENST00000488023 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
HFM1-208ENST00000488023 POTEB3A0JP26 581 aa9.71□□□□□ -0.86
HFM1-208ENST00000488023 NUBP1P53384 320 aa9.71□□□□□ -0.86
HFM1-208ENST00000488023 POTEBQ6S5H4 581 aa9.71□□□□□ -0.86
HFM1-208ENST00000488023 EMP3P54852 163 aa9.69□□□□□ -0.86
HFM1-208ENST00000488023 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
HFM1-208ENST00000488023 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
HFM1-208ENST00000488023 PLCD3Q8N3E9 789 aa9.63□□□□□ -0.87
HFM1-208ENST00000488023 FAM212AQ96EL1 285 aa9.6□□□□□ -0.87
HFM1-208ENST00000488023 ZBTB47Q9UFB7 747 aaPredicted RBP9.58□□□□□ -0.88
HFM1-208ENST00000488023 PDCD7Q8N8D1 485 aaKnown RBP9.57□□□□□ -0.88
HFM1-208ENST00000488023 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
HFM1-208ENST00000488023 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
HFM1-208ENST00000488023 L3MBTL3Q96JM7 780 aaPredicted RBP9.51□□□□□ -0.89
HFM1-208ENST00000488023 PYGBP11216 843 aa9.51□□□□□ -0.89
HFM1-208ENST00000488023 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
HFM1-208ENST00000488023 FKBP8Q14318 412 aa9.47□□□□□ -0.89
HFM1-208ENST00000488023 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.89
HFM1-208ENST00000488023 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
HFM1-208ENST00000488023 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
HFM1-208ENST00000488023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.9
HFM1-208ENST00000488023 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
HFM1-208ENST00000488023 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
HFM1-208ENST00000488023 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
HFM1-208ENST00000488023 ERBB3P21860 1342 aa9.38□□□□□ -0.91
HFM1-208ENST00000488023 ILDR1Q86SU0 546 aaPredicted RBP9.37□□□□□ -0.91
HFM1-208ENST00000488023 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
HFM1-208ENST00000488023 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
HFM1-208ENST00000488023 ZNF467Q7Z7K2 595 aaPredicted RBP9.34□□□□□ -0.91
HFM1-208ENST00000488023 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
HFM1-208ENST00000488023 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
HFM1-208ENST00000488023 PSEN1P49768 467 aa9.3□□□□□ -0.92
HFM1-208ENST00000488023 DOK7Q18PE1 504 aa9.3□□□□□ -0.92
HFM1-208ENST00000488023 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
HFM1-208ENST00000488023 ZNF687Q8N1G0 1237 aa9.26□□□□□ -0.93
HFM1-208ENST00000488023 G3V3G9 751 aa9.26□□□□□ -0.93
HFM1-208ENST00000488023 CHRM1P11229 460 aaPredicted RBP9.24□□□□□ -0.93
HFM1-208ENST00000488023 PTGER2P43116 358 aa9.24□□□□□ -0.93
HFM1-208ENST00000488023 GSE1Q14687 1217 aa9.23□□□□□ -0.93
HFM1-208ENST00000488023 RIMBP2O15034 1052 aa9.22□□□□□ -0.93
HFM1-208ENST00000488023 KLHL34Q8N239 644 aa9.21□□□□□ -0.93
HFM1-208ENST00000488023 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
HFM1-208ENST00000488023 PDAP1Q13442 181 aaKnown RBP9.19□□□□□ -0.94
HFM1-208ENST00000488023 CABP2Q9NPB3 220 aa9.19□□□□□ -0.94
HFM1-208ENST00000488023 ZSWIM6Q9HCJ5 1215 aa9.17□□□□□ -0.94
HFM1-208ENST00000488023 GPR153Q6NV75 609 aa9.16□□□□□ -0.94
HFM1-208ENST00000488023 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
HFM1-208ENST00000488023 TMEM92Q6UXU6 159 aa9.13□□□□□ -0.95
HFM1-208ENST00000488023 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
HFM1-208ENST00000488023 LSM11P83369 360 aaKnown RBP eCLIP9.08□□□□□ -0.96
HFM1-208ENST00000488023 ARSIQ5FYB1 569 aa9.06□□□□□ -0.96
HFM1-208ENST00000488023 MICALL2Q8IY33 904 aa9.05□□□□□ -0.96
HFM1-208ENST00000488023 ZNF316A6NFI3 1004 aaPredicted RBP9.04□□□□□ -0.96
HFM1-208ENST00000488023 IFNLR1Q8IU57 520 aaPredicted RBP9.04□□□□□ -0.96
HFM1-208ENST00000488023 SPOCK2Q92563 424 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms