RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PKD2Q13563 968 aa11.26□□□□□ -0.61
TTC3-220ENST00000487711 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
TTC3-220ENST00000487711 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
TTC3-220ENST00000487711 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
TTC3-220ENST00000487711 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
TTC3-220ENST00000487711 PYGBP11216 843 aa11.18□□□□□ -0.62
TTC3-220ENST00000487711 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
TTC3-220ENST00000487711 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
TTC3-220ENST00000487711 EVX2Q03828 476 aa11.12□□□□□ -0.63
TTC3-220ENST00000487711 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
TTC3-220ENST00000487711 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
TTC3-220ENST00000487711 RGL2O15211 777 aa11.09□□□□□ -0.63
TTC3-220ENST00000487711 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
TTC3-220ENST00000487711 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
TTC3-220ENST00000487711 MAP3K13O43283 966 aa11.06□□□□□ -0.64
TTC3-220ENST00000487711 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
TTC3-220ENST00000487711 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
TTC3-220ENST00000487711 RNF25Q96BH1 459 aaPredicted RBP11.04□□□□□ -0.64
TTC3-220ENST00000487711 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
TTC3-220ENST00000487711 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
TTC3-220ENST00000487711 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
TTC3-220ENST00000487711 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
TTC3-220ENST00000487711 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
TTC3-220ENST00000487711 CLCN6P51797 869 aa10.98□□□□□ -0.65
TTC3-220ENST00000487711 MS4A3Q96HJ5 214 aa10.98□□□□□ -0.65
TTC3-220ENST00000487711 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
TTC3-220ENST00000487711 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
TTC3-220ENST00000487711 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
TTC3-220ENST00000487711 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
TTC3-220ENST00000487711 GABBR2O75899 941 aa10.92□□□□□ -0.66
TTC3-220ENST00000487711 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
TTC3-220ENST00000487711 PSEN1P49768 467 aa10.91□□□□□ -0.66
TTC3-220ENST00000487711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
TTC3-220ENST00000487711 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
TTC3-220ENST00000487711 STK25O00506 426 aa10.89□□□□□ -0.67
TTC3-220ENST00000487711 TRPC6Q9Y210 931 aa10.88□□□□□ -0.67
TTC3-220ENST00000487711 BCL11BQ9C0K0 894 aaPredicted RBP10.86□□□□□ -0.67
TTC3-220ENST00000487711 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
TTC3-220ENST00000487711 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
TTC3-220ENST00000487711 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
TTC3-220ENST00000487711 TIE1P35590 1138 aa10.83□□□□□ -0.68
TTC3-220ENST00000487711 DCBLD2Q96PD2 775 aa10.81□□□□□ -0.68
TTC3-220ENST00000487711 BMP2KQ9NSY1 1161 aaPredicted RBP10.81□□□□□ -0.68
TTC3-220ENST00000487711 TTLL13PA6NNM8 815 aa10.79□□□□□ -0.68
TTC3-220ENST00000487711 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
TTC3-220ENST00000487711 CABP2Q9NPB3 220 aa10.78□□□□□ -0.68
TTC3-220ENST00000487711 BBXQ8WY36 941 aaPredicted RBP10.77□□□□□ -0.69
TTC3-220ENST00000487711 ATMINO43313 823 aaPredicted RBP10.75□□□□□ -0.69
TTC3-220ENST00000487711 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
TTC3-220ENST00000487711 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
TTC3-220ENST00000487711 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
TTC3-220ENST00000487711 TRIM35Q9UPQ4 493 aa10.73□□□□□ -0.69
TTC3-220ENST00000487711 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
TTC3-220ENST00000487711 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
TTC3-220ENST00000487711 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.69
TTC3-220ENST00000487711 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
TTC3-220ENST00000487711 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
TTC3-220ENST00000487711 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
TTC3-220ENST00000487711 SOX12O15370 315 aa10.65□□□□□ -0.7
TTC3-220ENST00000487711 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
TTC3-220ENST00000487711 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
TTC3-220ENST00000487711 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
TTC3-220ENST00000487711 IER5LQ5T953 404 aa10.63□□□□□ -0.71
TTC3-220ENST00000487711 MFRPQ9BY79 579 aa10.63□□□□□ -0.71
TTC3-220ENST00000487711 NLRP6P59044 892 aa10.62□□□□□ -0.71
TTC3-220ENST00000487711 RYDENQ9NUL5 291 aaKnown RBP10.62□□□□□ -0.71
TTC3-220ENST00000487711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.712e-9■■■□□ 16.7
TTC3-220ENST00000487711 PHF8Q9UPP1 1060 aa10.62□□□□□ -0.71
TTC3-220ENST00000487711 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
TTC3-220ENST00000487711 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
TTC3-220ENST00000487711 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
TTC3-220ENST00000487711 C7P10643 843 aa10.59□□□□□ -0.71
TTC3-220ENST00000487711 SEC24BO95487 1268 aa10.58□□□□□ -0.72
TTC3-220ENST00000487711 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
TTC3-220ENST00000487711 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
TTC3-220ENST00000487711 PLCG2P16885 1265 aa10.56□□□□□ -0.72
TTC3-220ENST00000487711 IRX5P78411 483 aaPredicted RBP10.56□□□□□ -0.72
TTC3-220ENST00000487711 OCEL1Q9H607 264 aa10.56□□□□□ -0.72
TTC3-220ENST00000487711 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
TTC3-220ENST00000487711 ILDR1Q86SU0 546 aaPredicted RBP10.53□□□□□ -0.72
TTC3-220ENST00000487711 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
TTC3-220ENST00000487711 PDCD7Q8N8D1 485 aaKnown RBP10.52□□□□□ -0.73
TTC3-220ENST00000487711 DPY19L2Q6NUT2 758 aa10.5□□□□□ -0.73
TTC3-220ENST00000487711 PPP1R37O75864 691 aa10.49□□□□□ -0.73
TTC3-220ENST00000487711 POTEFA5A3E0 1075 aa10.48□□□□□ -0.73
TTC3-220ENST00000487711 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
TTC3-220ENST00000487711 G3V3G9 751 aa10.46□□□□□ -0.73
TTC3-220ENST00000487711 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
TTC3-220ENST00000487711 TSHZ2Q9NRE2 1034 aa10.42□□□□□ -0.74
TTC3-220ENST00000487711 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
TTC3-220ENST00000487711 MICALL2Q8IY33 904 aa10.4□□□□□ -0.74
TTC3-220ENST00000487711 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
TTC3-220ENST00000487711 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
TTC3-220ENST00000487711 POTEB2H3BUK9 544 aa10.34□□□□□ -0.75
TTC3-220ENST00000487711 C3orf67Q6ZVT6 689 aa10.34□□□□□ -0.75
TTC3-220ENST00000487711 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
TTC3-220ENST00000487711 POTEJP0CG39 1038 aa10.3□□□□□ -0.76
TTC3-220ENST00000487711 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
TTC3-220ENST00000487711 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
TTC3-220ENST00000487711 VSIG10Q8N0Z9 540 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms