RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
SEC22C-215ENST00000487701 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
SEC22C-215ENST00000487701 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
SEC22C-215ENST00000487701 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
SEC22C-215ENST00000487701 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.32
SEC22C-215ENST00000487701 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
SEC22C-215ENST00000487701 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
SEC22C-215ENST00000487701 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
SEC22C-215ENST00000487701 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
SEC22C-215ENST00000487701 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
SEC22C-215ENST00000487701 LHX8Q68G74 356 aa12.93□□□□□ -0.34
SEC22C-215ENST00000487701 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
SEC22C-215ENST00000487701 RASEFQ8IZ41 740 aa12.87□□□□□ -0.35
SEC22C-215ENST00000487701 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
SEC22C-215ENST00000487701 NUBP1P53384 320 aa12.84□□□□□ -0.35
SEC22C-215ENST00000487701 BICRAQ9NZM4 1560 aa12.82□□□□□ -0.36
SEC22C-215ENST00000487701 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
SEC22C-215ENST00000487701 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
SEC22C-215ENST00000487701 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
SEC22C-215ENST00000487701 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
SEC22C-215ENST00000487701 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
SEC22C-215ENST00000487701 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
SEC22C-215ENST00000487701 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
SEC22C-215ENST00000487701 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
SEC22C-215ENST00000487701 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
SEC22C-215ENST00000487701 GSE1Q14687 1217 aa12.67□□□□□ -0.38
SEC22C-215ENST00000487701 ATMINO43313 823 aaPredicted RBP12.66□□□□□ -0.38
SEC22C-215ENST00000487701 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
SEC22C-215ENST00000487701 MAP3K13O43283 966 aa12.64□□□□□ -0.39
SEC22C-215ENST00000487701 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
SEC22C-215ENST00000487701 PYGBP11216 843 aa12.62□□□□□ -0.39
SEC22C-215ENST00000487701 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
SEC22C-215ENST00000487701 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
SEC22C-215ENST00000487701 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
SEC22C-215ENST00000487701 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
SEC22C-215ENST00000487701 C7P10643 843 aa12.57□□□□□ -0.4
SEC22C-215ENST00000487701 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
SEC22C-215ENST00000487701 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
SEC22C-215ENST00000487701 METRNQ9UJH8 293 aa12.56□□□□□ -0.4
SEC22C-215ENST00000487701 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
SEC22C-215ENST00000487701 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
SEC22C-215ENST00000487701 TIE1P35590 1138 aa12.53□□□□□ -0.4
SEC22C-215ENST00000487701 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
SEC22C-215ENST00000487701 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
SEC22C-215ENST00000487701 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
SEC22C-215ENST00000487701 EIF4G1Q04637 1599 aaKnown RBP12.45□□□□□ -0.42
SEC22C-215ENST00000487701 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
SEC22C-215ENST00000487701 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
SEC22C-215ENST00000487701 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
SEC22C-215ENST00000487701 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
SEC22C-215ENST00000487701 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
SEC22C-215ENST00000487701 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
SEC22C-215ENST00000487701 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
SEC22C-215ENST00000487701 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
SEC22C-215ENST00000487701 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
SEC22C-215ENST00000487701 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
SEC22C-215ENST00000487701 IER5LQ5T953 404 aa12.34□□□□□ -0.43
SEC22C-215ENST00000487701 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
SEC22C-215ENST00000487701 SEC24BO95487 1268 aa12.32□□□□□ -0.44
SEC22C-215ENST00000487701 PSEN1P49768 467 aa12.31□□□□□ -0.44
SEC22C-215ENST00000487701 PKD2Q13563 968 aa12.31□□□□□ -0.44
SEC22C-215ENST00000487701 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
SEC22C-215ENST00000487701 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
SEC22C-215ENST00000487701 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
SEC22C-215ENST00000487701 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
SEC22C-215ENST00000487701 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.44
SEC22C-215ENST00000487701 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
SEC22C-215ENST00000487701 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
SEC22C-215ENST00000487701 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
SEC22C-215ENST00000487701 RGL2O15211 777 aa12.2□□□□□ -0.46
SEC22C-215ENST00000487701 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
SEC22C-215ENST00000487701 BAZ1AQ9NRL2 1556 aaPredicted RBP12.2□□□□□ -0.46
SEC22C-215ENST00000487701 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
SEC22C-215ENST00000487701 PLCG2P16885 1265 aa12.18□□□□□ -0.46
SEC22C-215ENST00000487701 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
SEC22C-215ENST00000487701 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
SEC22C-215ENST00000487701 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
SEC22C-215ENST00000487701 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
SEC22C-215ENST00000487701 MROH2BQ7Z745 1585 aa12.15□□□□□ -0.46
SEC22C-215ENST00000487701 POTEMA6NI47 508 aa12.15□□□□□ -0.46
SEC22C-215ENST00000487701 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
SEC22C-215ENST00000487701 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
SEC22C-215ENST00000487701 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
SEC22C-215ENST00000487701 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
SEC22C-215ENST00000487701 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
SEC22C-215ENST00000487701 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
SEC22C-215ENST00000487701 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
SEC22C-215ENST00000487701 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
SEC22C-215ENST00000487701 STK25O00506 426 aa12.1□□□□□ -0.47
SEC22C-215ENST00000487701 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
SEC22C-215ENST00000487701 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
SEC22C-215ENST00000487701 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
SEC22C-215ENST00000487701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
SEC22C-215ENST00000487701 EFCAB3Q8N7B9 438 aa12.07□□□□□ -0.48
SEC22C-215ENST00000487701 WIZO95785 1651 aa12.06□□□□□ -0.48
SEC22C-215ENST00000487701 SLAIN1Q8ND83 568 aa12.06□□□□□ -0.48
SEC22C-215ENST00000487701 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
SEC22C-215ENST00000487701 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
SEC22C-215ENST00000487701 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
SEC22C-215ENST00000487701 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms