RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
SENP6-210ENST00000487548 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
SENP6-210ENST00000487548 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
SENP6-210ENST00000487548 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
SENP6-210ENST00000487548 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
SENP6-210ENST00000487548 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
SENP6-210ENST00000487548 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
SENP6-210ENST00000487548 ATN1P54259 1190 aaPredicted RBP11.74□□□□□ -0.53
SENP6-210ENST00000487548 FKBP8Q14318 412 aa11.74□□□□□ -0.53
SENP6-210ENST00000487548 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
SENP6-210ENST00000487548 MAP3K13O43283 966 aa11.73□□□□□ -0.53
SENP6-210ENST00000487548 TRPC6Q9Y210 931 aa11.73□□□□□ -0.53
SENP6-210ENST00000487548 C7P10643 843 aa11.71□□□□□ -0.53
SENP6-210ENST00000487548 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
SENP6-210ENST00000487548 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
SENP6-210ENST00000487548 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
SENP6-210ENST00000487548 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
SENP6-210ENST00000487548 PCDHB13Q9Y5F0 798 aa11.61□□□□□ -0.55
SENP6-210ENST00000487548 TIE1P35590 1138 aa11.59□□□□□ -0.55
SENP6-210ENST00000487548 NUBP1P53384 320 aa11.59□□□□□ -0.55
SENP6-210ENST00000487548 POTEMA6NI47 508 aa11.58□□□□□ -0.56
SENP6-210ENST00000487548 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
SENP6-210ENST00000487548 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
SENP6-210ENST00000487548 SEC24BO95487 1268 aa11.57□□□□□ -0.56
SENP6-210ENST00000487548 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
SENP6-210ENST00000487548 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
SENP6-210ENST00000487548 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
SENP6-210ENST00000487548 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
SENP6-210ENST00000487548 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
SENP6-210ENST00000487548 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
SENP6-210ENST00000487548 COLQQ9Y215 455 aaPredicted RBP11.53□□□□□ -0.56
SENP6-210ENST00000487548 FAM163AQ96GL9 167 aaPredicted RBP11.51□□□□□ -0.57
SENP6-210ENST00000487548 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
SENP6-210ENST00000487548 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
SENP6-210ENST00000487548 PYGBP11216 843 aa11.47□□□□□ -0.57
SENP6-210ENST00000487548 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
SENP6-210ENST00000487548 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
SENP6-210ENST00000487548 KLHL34Q8N239 644 aa11.42□□□□□ -0.58
SENP6-210ENST00000487548 IER5LQ5T953 404 aa11.41□□□□□ -0.58
SENP6-210ENST00000487548 LCE2DQ5TA82 110 aaPredicted RBP11.39□□□□□ -0.59
SENP6-210ENST00000487548 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
SENP6-210ENST00000487548 PLCG2P16885 1265 aa11.38□□□□□ -0.59
SENP6-210ENST00000487548 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
SENP6-210ENST00000487548 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
SENP6-210ENST00000487548 IRX5P78411 483 aaPredicted RBP11.29□□□□□ -0.6
SENP6-210ENST00000487548 OCEL1Q9H607 264 aa11.26□□□□□ -0.61
SENP6-210ENST00000487548 GSE1Q14687 1217 aa11.25□□□□□ -0.61
SENP6-210ENST00000487548 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
SENP6-210ENST00000487548 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
SENP6-210ENST00000487548 ST18O60284 1047 aa11.2□□□□□ -0.62
SENP6-210ENST00000487548 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
SENP6-210ENST00000487548 MKRN3Q13064 507 aaKnown RBP11.18□□□□□ -0.62
SENP6-210ENST00000487548 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
SENP6-210ENST00000487548 CDAN1Q8IWY9 1227 aa11.17□□□□□ -0.62
SENP6-210ENST00000487548 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
SENP6-210ENST00000487548 PSEN1P49768 467 aa11.16□□□□□ -0.62
SENP6-210ENST00000487548 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
SENP6-210ENST00000487548 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
SENP6-210ENST00000487548 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
SENP6-210ENST00000487548 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
SENP6-210ENST00000487548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.633e-12■■□□□ 12.6
SENP6-210ENST00000487548 CHRM1P11229 460 aaPredicted RBP11.1□□□□□ -0.63
SENP6-210ENST00000487548 MARVELD3Q96A59 401 aa11.09□□□□□ -0.63
SENP6-210ENST00000487548 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
SENP6-210ENST00000487548 SNPHO15079 494 aa11.06□□□□□ -0.64
SENP6-210ENST00000487548 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
SENP6-210ENST00000487548 L3MBTL3Q96JM7 780 aaPredicted RBP11.05□□□□□ -0.64
SENP6-210ENST00000487548 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
SENP6-210ENST00000487548 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
SENP6-210ENST00000487548 G3V3G9 751 aa10.99□□□□□ -0.65
SENP6-210ENST00000487548 EMP3P54852 163 aa10.96□□□□□ -0.65
SENP6-210ENST00000487548 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
SENP6-210ENST00000487548 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
SENP6-210ENST00000487548 EFCAB3Q8N7B9 438 aa10.9□□□□□ -0.66
SENP6-210ENST00000487548 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
SENP6-210ENST00000487548 SPNS2Q8IVW8 549 aa10.88□□□□□ -0.67
SENP6-210ENST00000487548 MMRN1Q13201 1228 aa10.86□□□□□ -0.67
SENP6-210ENST00000487548 HS3ST6Q96QI5 342 aa10.85□□□□□ -0.67
SENP6-210ENST00000487548 POTEB3A0JP26 581 aa10.84□□□□□ -0.67
SENP6-210ENST00000487548 POTEBQ6S5H4 581 aa10.84□□□□□ -0.67
SENP6-210ENST00000487548 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
SENP6-210ENST00000487548 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
SENP6-210ENST00000487548 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
SENP6-210ENST00000487548 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
SENP6-210ENST00000487548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
SENP6-210ENST00000487548 RNF25Q96BH1 459 aaPredicted RBP10.78□□□□□ -0.68
SENP6-210ENST00000487548 ZFP91Q96JP5 570 aaPredicted RBP10.78□□□□□ -0.68
SENP6-210ENST00000487548 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
SENP6-210ENST00000487548 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
SENP6-210ENST00000487548 DOK7Q18PE1 504 aa10.75□□□□□ -0.69
SENP6-210ENST00000487548 MICALL2Q8IY33 904 aa10.75□□□□□ -0.69
SENP6-210ENST00000487548 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
SENP6-210ENST00000487548 ERBB3P21860 1342 aa10.73□□□□□ -0.69
SENP6-210ENST00000487548 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
SENP6-210ENST00000487548 HOXB1P14653 301 aaPredicted RBP10.71□□□□□ -0.69
SENP6-210ENST00000487548 TMEM92Q6UXU6 159 aa10.71□□□□□ -0.69
SENP6-210ENST00000487548 MS4A4AQ96JQ5 239 aa10.71□□□□□ -0.69
SENP6-210ENST00000487548 RIMBP2O15034 1052 aa10.7□□□□□ -0.7
SENP6-210ENST00000487548 SOX12O15370 315 aa10.69□□□□□ -0.7
SENP6-210ENST00000487548 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms