RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
LINC00888-204ENST00000487386 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
LINC00888-204ENST00000487386 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
LINC00888-204ENST00000487386 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
LINC00888-204ENST00000487386 PKD2Q13563 968 aa12.12□□□□□ -0.47
LINC00888-204ENST00000487386 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
LINC00888-204ENST00000487386 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
LINC00888-204ENST00000487386 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
LINC00888-204ENST00000487386 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
LINC00888-204ENST00000487386 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
LINC00888-204ENST00000487386 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
LINC00888-204ENST00000487386 PYGBP11216 843 aa12.04□□□□□ -0.48
LINC00888-204ENST00000487386 CLCN6P51797 869 aa12.01□□□□□ -0.49
LINC00888-204ENST00000487386 MAP3K13O43283 966 aa12□□□□□ -0.49
LINC00888-204ENST00000487386 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
LINC00888-204ENST00000487386 SGIP1Q9BQI5 828 aa11.99□□□□□ -0.49
LINC00888-204ENST00000487386 GABBR2O75899 941 aa11.97□□□□□ -0.49
LINC00888-204ENST00000487386 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
LINC00888-204ENST00000487386 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
LINC00888-204ENST00000487386 RNF25Q96BH1 459 aaPredicted RBP11.93□□□□□ -0.5
LINC00888-204ENST00000487386 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
LINC00888-204ENST00000487386 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
LINC00888-204ENST00000487386 RGL2O15211 777 aa11.9□□□□□ -0.5
LINC00888-204ENST00000487386 ZNF467Q7Z7K2 595 aaPredicted RBP11.89□□□□□ -0.51
LINC00888-204ENST00000487386 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
LINC00888-204ENST00000487386 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
LINC00888-204ENST00000487386 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
LINC00888-204ENST00000487386 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
LINC00888-204ENST00000487386 TIE1P35590 1138 aa11.79□□□□□ -0.52
LINC00888-204ENST00000487386 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
LINC00888-204ENST00000487386 PSEN1P49768 467 aa11.77□□□□□ -0.53
LINC00888-204ENST00000487386 BMP2KQ9NSY1 1161 aaPredicted RBP11.77□□□□□ -0.53
LINC00888-204ENST00000487386 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
LINC00888-204ENST00000487386 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
LINC00888-204ENST00000487386 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
LINC00888-204ENST00000487386 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
LINC00888-204ENST00000487386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
LINC00888-204ENST00000487386 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
LINC00888-204ENST00000487386 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
LINC00888-204ENST00000487386 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
LINC00888-204ENST00000487386 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
LINC00888-204ENST00000487386 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
LINC00888-204ENST00000487386 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
LINC00888-204ENST00000487386 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
LINC00888-204ENST00000487386 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
LINC00888-204ENST00000487386 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.54
LINC00888-204ENST00000487386 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-204ENST00000487386 STK25O00506 426 aa11.64□□□□□ -0.55
LINC00888-204ENST00000487386 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
LINC00888-204ENST00000487386 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
LINC00888-204ENST00000487386 STK24Q9Y6E0 443 aa11.62□□□□□ -0.55
LINC00888-204ENST00000487386 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
LINC00888-204ENST00000487386 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
LINC00888-204ENST00000487386 IER5LQ5T953 404 aa11.57□□□□□ -0.56
LINC00888-204ENST00000487386 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
LINC00888-204ENST00000487386 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
LINC00888-204ENST00000487386 C7P10643 843 aa11.54□□□□□ -0.56
LINC00888-204ENST00000487386 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
LINC00888-204ENST00000487386 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
LINC00888-204ENST00000487386 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
LINC00888-204ENST00000487386 SOX12O15370 315 aa11.52□□□□□ -0.57
LINC00888-204ENST00000487386 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
LINC00888-204ENST00000487386 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
LINC00888-204ENST00000487386 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
LINC00888-204ENST00000487386 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
LINC00888-204ENST00000487386 METRNQ9UJH8 293 aa11.5□□□□□ -0.57
LINC00888-204ENST00000487386 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
LINC00888-204ENST00000487386 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
LINC00888-204ENST00000487386 FBXO22Q8NEZ5 403 aa11.46□□□□□ -0.57
LINC00888-204ENST00000487386 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
LINC00888-204ENST00000487386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00888-204ENST00000487386 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
LINC00888-204ENST00000487386 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
LINC00888-204ENST00000487386 LHX8Q68G74 356 aa11.44□□□□□ -0.58
LINC00888-204ENST00000487386 SEC24BO95487 1268 aa11.43□□□□□ -0.58
LINC00888-204ENST00000487386 NLRP6P59044 892 aa11.43□□□□□ -0.58
LINC00888-204ENST00000487386 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
LINC00888-204ENST00000487386 PLCG2P16885 1265 aa11.42□□□□□ -0.58
LINC00888-204ENST00000487386 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
LINC00888-204ENST00000487386 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
LINC00888-204ENST00000487386 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
LINC00888-204ENST00000487386 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
LINC00888-204ENST00000487386 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
LINC00888-204ENST00000487386 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
LINC00888-204ENST00000487386 PPP1R37O75864 691 aa11.32□□□□□ -0.6
LINC00888-204ENST00000487386 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
LINC00888-204ENST00000487386 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
LINC00888-204ENST00000487386 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
LINC00888-204ENST00000487386 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
LINC00888-204ENST00000487386 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
LINC00888-204ENST00000487386 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
LINC00888-204ENST00000487386 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
LINC00888-204ENST00000487386 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
LINC00888-204ENST00000487386 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
LINC00888-204ENST00000487386 G3V3G9 751 aa11.19□□□□□ -0.62
LINC00888-204ENST00000487386 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
LINC00888-204ENST00000487386 SCUBE2Q9NQ36 999 aa11.15□□□□□ -0.62
LINC00888-204ENST00000487386 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
LINC00888-204ENST00000487386 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
LINC00888-204ENST00000487386 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms