RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
R3HDM1-218ENST00000487294 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
R3HDM1-218ENST00000487294 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
R3HDM1-218ENST00000487294 MIER1Q8N108 512 aa11.5□□□□□ -0.57
R3HDM1-218ENST00000487294 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
R3HDM1-218ENST00000487294 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
R3HDM1-218ENST00000487294 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
R3HDM1-218ENST00000487294 KIF12Q96FN5 646 aa11.44□□□□□ -0.58
R3HDM1-218ENST00000487294 POTEB2H3BUK9 544 aa11.43□□□□□ -0.58
R3HDM1-218ENST00000487294 C7P10643 843 aa11.43□□□□□ -0.58
R3HDM1-218ENST00000487294 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
R3HDM1-218ENST00000487294 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
R3HDM1-218ENST00000487294 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
R3HDM1-218ENST00000487294 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
R3HDM1-218ENST00000487294 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
R3HDM1-218ENST00000487294 VASPP50552 380 aaPredicted RBP11.38□□□□□ -0.59
R3HDM1-218ENST00000487294 MAP3K13O43283 966 aa11.35□□□□□ -0.59
R3HDM1-218ENST00000487294 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
R3HDM1-218ENST00000487294 TIE1P35590 1138 aa11.34□□□□□ -0.59
R3HDM1-218ENST00000487294 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
R3HDM1-218ENST00000487294 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
R3HDM1-218ENST00000487294 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
R3HDM1-218ENST00000487294 NUBP1P53384 320 aa11.3□□□□□ -0.6
R3HDM1-218ENST00000487294 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
R3HDM1-218ENST00000487294 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
R3HDM1-218ENST00000487294 TTLL13PA6NNM8 815 aa11.25□□□□□ -0.61
R3HDM1-218ENST00000487294 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
R3HDM1-218ENST00000487294 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-218ENST00000487294 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
R3HDM1-218ENST00000487294 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
R3HDM1-218ENST00000487294 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.61
R3HDM1-218ENST00000487294 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
R3HDM1-218ENST00000487294 POTEFA5A3E0 1075 aa11.2□□□□□ -0.62
R3HDM1-218ENST00000487294 IER5LQ5T953 404 aa11.2□□□□□ -0.62
R3HDM1-218ENST00000487294 POTEMA6NI47 508 aa11.17□□□□□ -0.62
R3HDM1-218ENST00000487294 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
R3HDM1-218ENST00000487294 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
R3HDM1-218ENST00000487294 SEC24BO95487 1268 aa11.16□□□□□ -0.62
R3HDM1-218ENST00000487294 POTEGQ6S5H5 508 aa11.14□□□□□ -0.63
R3HDM1-218ENST00000487294 NACADO15069 1562 aa11.14□□□□□ -0.63
R3HDM1-218ENST00000487294 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
R3HDM1-218ENST00000487294 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
R3HDM1-218ENST00000487294 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
R3HDM1-218ENST00000487294 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
R3HDM1-218ENST00000487294 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
R3HDM1-218ENST00000487294 PCDH10Q9P2E7 1040 aa11.07□□□□□ -0.64
R3HDM1-218ENST00000487294 PYGBP11216 843 aa11.05□□□□□ -0.64
R3HDM1-218ENST00000487294 PLCG2P16885 1265 aa11.04□□□□□ -0.64
R3HDM1-218ENST00000487294 LCE2DQ5TA82 110 aaPredicted RBP11.04□□□□□ -0.64
R3HDM1-218ENST00000487294 GSE1Q14687 1217 aa11.02□□□□□ -0.65
R3HDM1-218ENST00000487294 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
R3HDM1-218ENST00000487294 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
R3HDM1-218ENST00000487294 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
R3HDM1-218ENST00000487294 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
R3HDM1-218ENST00000487294 PCDHB8Q9UN66 801 aa10.97□□□□□ -0.65
R3HDM1-218ENST00000487294 OCEL1Q9H607 264 aa10.96□□□□□ -0.65
R3HDM1-218ENST00000487294 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
R3HDM1-218ENST00000487294 SLAIN1Q8ND83 568 aa10.95□□□□□ -0.66
R3HDM1-218ENST00000487294 CHRM1P11229 460 aaPredicted RBP10.94□□□□□ -0.66
R3HDM1-218ENST00000487294 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
R3HDM1-218ENST00000487294 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
R3HDM1-218ENST00000487294 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
R3HDM1-218ENST00000487294 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
R3HDM1-218ENST00000487294 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.85□□□□□ -0.67
R3HDM1-218ENST00000487294 PSEN1P49768 467 aa10.84□□□□□ -0.67
R3HDM1-218ENST00000487294 MKRN3Q13064 507 aaKnown RBP10.84□□□□□ -0.67
R3HDM1-218ENST00000487294 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
R3HDM1-218ENST00000487294 SHROOM4Q9ULL8 1493 aa10.82□□□□□ -0.68
R3HDM1-218ENST00000487294 ST18O60284 1047 aa10.82□□□□□ -0.68
R3HDM1-218ENST00000487294 SNPHO15079 494 aa10.81□□□□□ -0.68
R3HDM1-218ENST00000487294 PDAP1Q13442 181 aaKnown RBP10.81□□□□□ -0.68
R3HDM1-218ENST00000487294 PKD2Q13563 968 aa10.81□□□□□ -0.68
R3HDM1-218ENST00000487294 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
R3HDM1-218ENST00000487294 L3MBTL3Q96JM7 780 aaPredicted RBP10.8□□□□□ -0.68
R3HDM1-218ENST00000487294 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
R3HDM1-218ENST00000487294 TMEM121BQ9BXQ6 578 aaPredicted RBP10.79□□□□□ -0.68
R3HDM1-218ENST00000487294 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
R3HDM1-218ENST00000487294 CDAN1Q8IWY9 1227 aa10.78□□□□□ -0.68
R3HDM1-218ENST00000487294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.69
R3HDM1-218ENST00000487294 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
R3HDM1-218ENST00000487294 ZCCHC6Q5VYS8 1495 aaKnown RBP10.74□□□□□ -0.69
R3HDM1-218ENST00000487294 ECM2O94769 699 aaPredicted RBP10.74□□□□□ -0.69
R3HDM1-218ENST00000487294 RNF25Q96BH1 459 aaPredicted RBP10.73□□□□□ -0.69
R3HDM1-218ENST00000487294 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
R3HDM1-218ENST00000487294 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
R3HDM1-218ENST00000487294 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
R3HDM1-218ENST00000487294 RGL2O15211 777 aa10.66□□□□□ -0.7
R3HDM1-218ENST00000487294 CECR2Q9BXF3 1484 aa10.66□□□□□ -0.7
R3HDM1-218ENST00000487294 G3V3G9 751 aa10.64□□□□□ -0.71
R3HDM1-218ENST00000487294 EIF4G1Q04637 1599 aaKnown RBP10.63□□□□□ -0.71
R3HDM1-218ENST00000487294 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
R3HDM1-218ENST00000487294 DPY19L2Q6NUT2 758 aa10.61□□□□□ -0.71
R3HDM1-218ENST00000487294 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
R3HDM1-218ENST00000487294 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
R3HDM1-218ENST00000487294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-218ENST00000487294 EMP3P54852 163 aa10.58□□□□□ -0.72
R3HDM1-218ENST00000487294 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-218ENST00000487294 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
R3HDM1-218ENST00000487294 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
R3HDM1-218ENST00000487294 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms