RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.734e-6■□□□□ 11.1
EPHB4-206ENST00000487222 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
EPHB4-206ENST00000487222 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
EPHB4-206ENST00000487222 CEP162Q5TB80 1403 aa19.61■□□□□ 0.73
EPHB4-206ENST00000487222 KDM2AQ9Y2K7 1162 aa19.6■□□□□ 0.73
EPHB4-206ENST00000487222 IRX6P78412 446 aaPredicted RBP19.6■□□□□ 0.73
EPHB4-206ENST00000487222 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.73
EPHB4-206ENST00000487222 KIF27Q86VH2 1401 aa19.52■□□□□ 0.71
EPHB4-206ENST00000487222 RRP7BPQ9NSQ0 103 aa19.52■□□□□ 0.71
EPHB4-206ENST00000487222 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
EPHB4-206ENST00000487222 GLIPR1L2Q4G1C9 344 aa19.5■□□□□ 0.71
EPHB4-206ENST00000487222 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
EPHB4-206ENST00000487222 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
EPHB4-206ENST00000487222 DDRGK1Q96HY6 314 aa19.45■□□□□ 0.7
EPHB4-206ENST00000487222 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
EPHB4-206ENST00000487222 ARXQ96QS3 562 aa19.41■□□□□ 0.7
EPHB4-206ENST00000487222 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
EPHB4-206ENST00000487222 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
EPHB4-206ENST00000487222 BECN1Q14457 450 aa19.4■□□□□ 0.7
EPHB4-206ENST00000487222 KCNH8Q96L42 1107 aa19.38■□□□□ 0.69
EPHB4-206ENST00000487222 SUPT16HQ9Y5B9 1047 aaKnown RBP19.37■□□□□ 0.69
EPHB4-206ENST00000487222 ANP32EQ9BTT0 268 aa19.36■□□□□ 0.69
EPHB4-206ENST00000487222 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
EPHB4-206ENST00000487222 CFDP1Q9UEE9 299 aaPredicted RBP19.35■□□□□ 0.69
EPHB4-206ENST00000487222 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
EPHB4-206ENST00000487222 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
EPHB4-206ENST00000487222 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
EPHB4-206ENST00000487222 KNSTRNQ9Y448 316 aa19.27■□□□□ 0.68
EPHB4-206ENST00000487222 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.67
EPHB4-206ENST00000487222 CFAP53Q96M91 514 aa19.26■□□□□ 0.67
EPHB4-206ENST00000487222 PPM1GO15355 546 aaPredicted RBP19.26■□□□□ 0.67
EPHB4-206ENST00000487222 SIN3AQ96ST3 1273 aa19.25■□□□□ 0.67
EPHB4-206ENST00000487222 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
EPHB4-206ENST00000487222 TRIM44Q96DX7 344 aaPredicted RBP19.23■□□□□ 0.67
EPHB4-206ENST00000487222 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
EPHB4-206ENST00000487222 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
EPHB4-206ENST00000487222 NCLP19338 710 aaKnown RBP19.2■□□□□ 0.66
EPHB4-206ENST00000487222 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
EPHB4-206ENST00000487222 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
EPHB4-206ENST00000487222 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
EPHB4-206ENST00000487222 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
EPHB4-206ENST00000487222 SOGA1O94964 1423 aa19.17■□□□□ 0.66
EPHB4-206ENST00000487222 CUX2O14529 1486 aa19.16■□□□□ 0.66
EPHB4-206ENST00000487222 ERCC6Q03468 1493 aa19.15■□□□□ 0.66
EPHB4-206ENST00000487222 FTSJ3Q8IY81 847 aaKnown RBP19.14■□□□□ 0.65
EPHB4-206ENST00000487222 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
EPHB4-206ENST00000487222 CCER2I3L3R5 266 aa19.12■□□□□ 0.65
EPHB4-206ENST00000487222 ERICH6BQ5W0A0 696 aa19.1■□□□□ 0.65
EPHB4-206ENST00000487222 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
EPHB4-206ENST00000487222 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
EPHB4-206ENST00000487222 CASC1Q6TDU7 716 aa19.08■□□□□ 0.64
EPHB4-206ENST00000487222 RGS3P49796 1198 aa19.08■□□□□ 0.64
EPHB4-206ENST00000487222 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
EPHB4-206ENST00000487222 NEUROD2Q15784 382 aa19.07■□□□□ 0.64
EPHB4-206ENST00000487222 B4GALNT3Q6L9W6 998 aa19.07■□□□□ 0.64
EPHB4-206ENST00000487222 NUDCQ9Y266 331 aa19.07■□□□□ 0.64
EPHB4-206ENST00000487222 MAPK8IP3Q9UPT6 1336 aa19.07■□□□□ 0.64
EPHB4-206ENST00000487222 LAS1LQ9Y4W2 734 aaKnown RBP19.07■□□□□ 0.64
EPHB4-206ENST00000487222 VPS8Q8N3P4 1428 aa19.04■□□□□ 0.64
EPHB4-206ENST00000487222 MS4A1P11836 297 aa19.03■□□□□ 0.64
EPHB4-206ENST00000487222 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
EPHB4-206ENST00000487222 FRAT1Q92837 279 aaPredicted RBP19.02■□□□□ 0.64
EPHB4-206ENST00000487222 CHMP4BQ9H444 224 aaKnown RBP19.02■□□□□ 0.64
EPHB4-206ENST00000487222 PTMAP06454 111 aaKnown RBP19.01■□□□□ 0.63
EPHB4-206ENST00000487222 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
EPHB4-206ENST00000487222 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
EPHB4-206ENST00000487222 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
EPHB4-206ENST00000487222 ZBTB7CA1YPR0 619 aa19■□□□□ 0.63
EPHB4-206ENST00000487222 ARID4BQ4LE39 1312 aaPredicted RBP18.99■□□□□ 0.63
EPHB4-206ENST00000487222 SMARCA2P51531 1590 aa18.99■□□□□ 0.63
EPHB4-206ENST00000487222 TMF1P82094 1093 aa18.99■□□□□ 0.63
EPHB4-206ENST00000487222 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
EPHB4-206ENST00000487222 ABCC8Q09428 1581 aa18.96■□□□□ 0.63
EPHB4-206ENST00000487222 ZRSR1Q15695 479 aaKnown RBP18.95■□□□□ 0.62
EPHB4-206ENST00000487222 RBM19Q9Y4C8 960 aaKnown RBP18.95■□□□□ 0.62
EPHB4-206ENST00000487222 HSPA5P11021 654 aaKnown RBP18.94■□□□□ 0.62
EPHB4-206ENST00000487222 CDK11BP21127 795 aaKnown RBP18.94■□□□□ 0.62
EPHB4-206ENST00000487222 POGKQ9P215 609 aa18.93■□□□□ 0.62
EPHB4-206ENST00000487222 ARHGAP35Q9NRY4 1499 aa18.92■□□□□ 0.62
EPHB4-206ENST00000487222 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
EPHB4-206ENST00000487222 DNTTIP2Q5QJE6 756 aaKnown RBP18.92■□□□□ 0.62
EPHB4-206ENST00000487222 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
EPHB4-206ENST00000487222 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
EPHB4-206ENST00000487222 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
EPHB4-206ENST00000487222 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
EPHB4-206ENST00000487222 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
EPHB4-206ENST00000487222 U2SURPO15042 1029 aaKnown RBP18.9■□□□□ 0.62
EPHB4-206ENST00000487222 A0A0G2JS52 829 aa18.89■□□□□ 0.61
EPHB4-206ENST00000487222 NAP1L5Q96NT1 182 aaPredicted RBP18.88■□□□□ 0.61
EPHB4-206ENST00000487222 KANK1Q14678 1352 aa18.88■□□□□ 0.61
EPHB4-206ENST00000487222 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
EPHB4-206ENST00000487222 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
EPHB4-206ENST00000487222 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
EPHB4-206ENST00000487222 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
EPHB4-206ENST00000487222 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
EPHB4-206ENST00000487222 HSCBQ8IWL3 235 aa18.84■□□□□ 0.61
EPHB4-206ENST00000487222 DEKP35659 375 aaKnown RBP18.83■□□□□ 0.6
EPHB4-206ENST00000487222 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.6
EPHB4-206ENST00000487222 KTN1Q86UP2 1357 aaKnown RBP18.82■□□□□ 0.6
EPHB4-206ENST00000487222 TPRNQ4KMQ1 711 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms