RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
PRPF38A-203ENST00000487160 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
PRPF38A-203ENST00000487160 FAM212AQ96EL1 285 aa11.83□□□□□ -0.52
PRPF38A-203ENST00000487160 CHADLQ6NUI6 762 aa11.77□□□□□ -0.53
PRPF38A-203ENST00000487160 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
PRPF38A-203ENST00000487160 SPRYD3Q8NCJ5 442 aa11.77□□□□□ -0.53
PRPF38A-203ENST00000487160 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
PRPF38A-203ENST00000487160 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
PRPF38A-203ENST00000487160 CHRM1P11229 460 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-203ENST00000487160 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
PRPF38A-203ENST00000487160 PYGBP11216 843 aa11.7□□□□□ -0.54
PRPF38A-203ENST00000487160 KDM2AQ9Y2K7 1162 aa11.69□□□□□ -0.54
PRPF38A-203ENST00000487160 FARP1Q9Y4F1 1045 aaPredicted RBP11.68□□□□□ -0.54
PRPF38A-203ENST00000487160 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
PRPF38A-203ENST00000487160 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
PRPF38A-203ENST00000487160 DNAJC5Q9H3Z4 198 aa11.66□□□□□ -0.54
PRPF38A-203ENST00000487160 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
PRPF38A-203ENST00000487160 STK25O00506 426 aa11.64□□□□□ -0.55
PRPF38A-203ENST00000487160 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-203ENST00000487160 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-203ENST00000487160 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
PRPF38A-203ENST00000487160 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-203ENST00000487160 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-203ENST00000487160 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
PRPF38A-203ENST00000487160 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
PRPF38A-203ENST00000487160 STK24Q9Y6E0 443 aa11.57□□□□□ -0.56
PRPF38A-203ENST00000487160 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
PRPF38A-203ENST00000487160 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
PRPF38A-203ENST00000487160 BCANQ96GW7 911 aa11.55□□□□□ -0.56
PRPF38A-203ENST00000487160 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
PRPF38A-203ENST00000487160 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
PRPF38A-203ENST00000487160 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
PRPF38A-203ENST00000487160 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
PRPF38A-203ENST00000487160 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
PRPF38A-203ENST00000487160 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
PRPF38A-203ENST00000487160 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-203ENST00000487160 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
PRPF38A-203ENST00000487160 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
PRPF38A-203ENST00000487160 PSEN1P49768 467 aa11.4□□□□□ -0.58
PRPF38A-203ENST00000487160 MAP3K13O43283 966 aa11.38□□□□□ -0.59
PRPF38A-203ENST00000487160 IFNL1Q8IU54 200 aa11.38□□□□□ -0.59
PRPF38A-203ENST00000487160 KIF12Q96FN5 646 aa11.38□□□□□ -0.59
PRPF38A-203ENST00000487160 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
PRPF38A-203ENST00000487160 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
PRPF38A-203ENST00000487160 PRKCSHP14314 528 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-203ENST00000487160 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
PRPF38A-203ENST00000487160 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
PRPF38A-203ENST00000487160 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
PRPF38A-203ENST00000487160 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
PRPF38A-203ENST00000487160 NBR1Q14596 966 aa11.25□□□□□ -0.61
PRPF38A-203ENST00000487160 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
PRPF38A-203ENST00000487160 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
PRPF38A-203ENST00000487160 SOX12O15370 315 aa11.21□□□□□ -0.61
PRPF38A-203ENST00000487160 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
PRPF38A-203ENST00000487160 PPP1R37O75864 691 aa11.2□□□□□ -0.62
PRPF38A-203ENST00000487160 NLRP6P59044 892 aa11.2□□□□□ -0.62
PRPF38A-203ENST00000487160 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
PRPF38A-203ENST00000487160 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
PRPF38A-203ENST00000487160 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
PRPF38A-203ENST00000487160 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
PRPF38A-203ENST00000487160 TMEM106CQ9BVX2 250 aa11.15□□□□□ -0.62
PRPF38A-203ENST00000487160 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
PRPF38A-203ENST00000487160 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
PRPF38A-203ENST00000487160 P3H3Q8IVL6 736 aa11.09□□□□□ -0.63
PRPF38A-203ENST00000487160 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
PRPF38A-203ENST00000487160 KCNV2Q8TDN2 545 aa11.06□□□□□ -0.64
PRPF38A-203ENST00000487160 TIE1P35590 1138 aa11.05□□□□□ -0.64
PRPF38A-203ENST00000487160 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-203ENST00000487160 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
PRPF38A-203ENST00000487160 HAX1O00165 279 aa11.03□□□□□ -0.64
PRPF38A-203ENST00000487160 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
PRPF38A-203ENST00000487160 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
PRPF38A-203ENST00000487160 EVX2Q03828 476 aa11□□□□□ -0.65
PRPF38A-203ENST00000487160 NCKAP5LQ9HCH0 1330 aa10.99□□□□□ -0.65
PRPF38A-203ENST00000487160 E2F4Q16254 413 aa10.97□□□□□ -0.65
PRPF38A-203ENST00000487160 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
PRPF38A-203ENST00000487160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.652e-8■■□□□ 11.8
PRPF38A-203ENST00000487160 PDE4AP27815 886 aa10.96□□□□□ -0.65
PRPF38A-203ENST00000487160 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
PRPF38A-203ENST00000487160 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
PRPF38A-203ENST00000487160 ARHGEF1Q92888 912 aaKnown RBP10.94□□□□□ -0.66
PRPF38A-203ENST00000487160 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
PRPF38A-203ENST00000487160 CLCN6P51797 869 aa10.92□□□□□ -0.66
PRPF38A-203ENST00000487160 MFSD10Q14728 455 aa10.91□□□□□ -0.66
PRPF38A-203ENST00000487160 DDX27Q96GQ7 796 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-203ENST00000487160 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
PRPF38A-203ENST00000487160 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
PRPF38A-203ENST00000487160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
PRPF38A-203ENST00000487160 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-203ENST00000487160 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
PRPF38A-203ENST00000487160 SEMA3EO15041 775 aa10.83□□□□□ -0.68
PRPF38A-203ENST00000487160 ASTLQ6HA08 431 aaPredicted RBP10.83□□□□□ -0.68
PRPF38A-203ENST00000487160 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
PRPF38A-203ENST00000487160 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
PRPF38A-203ENST00000487160 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-203ENST00000487160 IRX5P78411 483 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-203ENST00000487160 CAMK2BQ13554 666 aa10.81□□□□□ -0.68
PRPF38A-203ENST00000487160 MICALL2Q8IY33 904 aa10.81□□□□□ -0.68
PRPF38A-203ENST00000487160 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
PRPF38A-203ENST00000487160 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms