RNA–Protein interactions for RNA: ENST00000487036.1

FAM208A-208, Transcript of family with sequence similarity 208 member A, humanhuman

TSL 3

Gene FAM208A, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-208ENST00000487036 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
FAM208A-208ENST00000487036 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
FAM208A-208ENST00000487036 C7P10643 843 aa11.64□□□□□ -0.55
FAM208A-208ENST00000487036 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
FAM208A-208ENST00000487036 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
FAM208A-208ENST00000487036 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
FAM208A-208ENST00000487036 KIF12Q96FN5 646 aa11.63□□□□□ -0.55
FAM208A-208ENST00000487036 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
FAM208A-208ENST00000487036 POTEMA6NI47 508 aa11.59□□□□□ -0.55
FAM208A-208ENST00000487036 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
FAM208A-208ENST00000487036 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
FAM208A-208ENST00000487036 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
FAM208A-208ENST00000487036 RASEFQ8IZ41 740 aa11.54□□□□□ -0.56
FAM208A-208ENST00000487036 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
FAM208A-208ENST00000487036 MAP3K13O43283 966 aa11.53□□□□□ -0.56
FAM208A-208ENST00000487036 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
FAM208A-208ENST00000487036 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
FAM208A-208ENST00000487036 MIER1Q8N108 512 aa11.5□□□□□ -0.57
FAM208A-208ENST00000487036 TIE1P35590 1138 aa11.47□□□□□ -0.57
FAM208A-208ENST00000487036 TTLL13PA6NNM8 815 aa11.42□□□□□ -0.58
FAM208A-208ENST00000487036 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
FAM208A-208ENST00000487036 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
FAM208A-208ENST00000487036 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
FAM208A-208ENST00000487036 NUBP1P53384 320 aa11.4□□□□□ -0.58
FAM208A-208ENST00000487036 SCUBE2Q9NQ36 999 aa11.4□□□□□ -0.58
FAM208A-208ENST00000487036 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
FAM208A-208ENST00000487036 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
FAM208A-208ENST00000487036 PLCD3Q8N3E9 789 aa11.33□□□□□ -0.6
FAM208A-208ENST00000487036 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
FAM208A-208ENST00000487036 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
FAM208A-208ENST00000487036 IER5LQ5T953 404 aa11.31□□□□□ -0.6
FAM208A-208ENST00000487036 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
FAM208A-208ENST00000487036 SEC24BO95487 1268 aa11.29□□□□□ -0.6
FAM208A-208ENST00000487036 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
FAM208A-208ENST00000487036 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
FAM208A-208ENST00000487036 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
FAM208A-208ENST00000487036 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
FAM208A-208ENST00000487036 FKBP8Q14318 412 aa11.17□□□□□ -0.62
FAM208A-208ENST00000487036 SLAIN1Q8ND83 568 aa11.15□□□□□ -0.62
FAM208A-208ENST00000487036 ST18O60284 1047 aa11.14□□□□□ -0.63
FAM208A-208ENST00000487036 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
FAM208A-208ENST00000487036 PYGBP11216 843 aa11.11□□□□□ -0.63
FAM208A-208ENST00000487036 PLCG2P16885 1265 aa11.11□□□□□ -0.63
FAM208A-208ENST00000487036 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
FAM208A-208ENST00000487036 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
FAM208A-208ENST00000487036 PCDHB8Q9UN66 801 aa11.08□□□□□ -0.64
FAM208A-208ENST00000487036 PDCD7Q8N8D1 485 aaKnown RBP11□□□□□ -0.65
FAM208A-208ENST00000487036 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
FAM208A-208ENST00000487036 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
FAM208A-208ENST00000487036 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
FAM208A-208ENST00000487036 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.96□□□□□ -0.65
FAM208A-208ENST00000487036 SNPHO15079 494 aa10.92□□□□□ -0.66
FAM208A-208ENST00000487036 GSE1Q14687 1217 aa10.92□□□□□ -0.66
FAM208A-208ENST00000487036 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
FAM208A-208ENST00000487036 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
FAM208A-208ENST00000487036 SPNS2Q8IVW8 549 aa10.91□□□□□ -0.66
FAM208A-208ENST00000487036 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
FAM208A-208ENST00000487036 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
FAM208A-208ENST00000487036 MMRN1Q13201 1228 aa10.88□□□□□ -0.67
FAM208A-208ENST00000487036 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
FAM208A-208ENST00000487036 PSEN1P49768 467 aa10.85□□□□□ -0.67
FAM208A-208ENST00000487036 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
FAM208A-208ENST00000487036 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
FAM208A-208ENST00000487036 POTEB3A0JP26 581 aa10.83□□□□□ -0.68
FAM208A-208ENST00000487036 POTEBQ6S5H4 581 aa10.83□□□□□ -0.68
FAM208A-208ENST00000487036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.83□□□□□ -0.687e-7■■■■□ 25.9
FAM208A-208ENST00000487036 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
FAM208A-208ENST00000487036 C3orf67Q6ZVT6 689 aa10.8□□□□□ -0.68
FAM208A-208ENST00000487036 GOLGA2Q08379 1002 aa10.79□□□□□ -0.68
FAM208A-208ENST00000487036 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
FAM208A-208ENST00000487036 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
FAM208A-208ENST00000487036 PDAP1Q13442 181 aaKnown RBP10.76□□□□□ -0.69
FAM208A-208ENST00000487036 IFNLR1Q8IU57 520 aaPredicted RBP10.76□□□□□ -0.69
FAM208A-208ENST00000487036 EMP3P54852 163 aa10.75□□□□□ -0.69
FAM208A-208ENST00000487036 HS3ST6Q96QI5 342 aa10.74□□□□□ -0.69
FAM208A-208ENST00000487036 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
FAM208A-208ENST00000487036 SPOCK2Q92563 424 aa10.71□□□□□ -0.69
FAM208A-208ENST00000487036 CABP2Q9NPB3 220 aa10.71□□□□□ -0.69
FAM208A-208ENST00000487036 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
FAM208A-208ENST00000487036 BOLA1Q9Y3E2 137 aa10.7□□□□□ -0.7
FAM208A-208ENST00000487036 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
FAM208A-208ENST00000487036 HOXB1P14653 301 aaPredicted RBP10.62□□□□□ -0.71
FAM208A-208ENST00000487036 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
FAM208A-208ENST00000487036 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
FAM208A-208ENST00000487036 G3V3G9 751 aa10.55□□□□□ -0.72
FAM208A-208ENST00000487036 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
FAM208A-208ENST00000487036 ZNF710Q8N1W2 664 aa10.53□□□□□ -0.72
FAM208A-208ENST00000487036 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
FAM208A-208ENST00000487036 MICALL2Q8IY33 904 aa10.5□□□□□ -0.73
FAM208A-208ENST00000487036 MS4A4AQ96JQ5 239 aa10.5□□□□□ -0.73
FAM208A-208ENST00000487036 ERBB3P21860 1342 aa10.5□□□□□ -0.73
FAM208A-208ENST00000487036 RNF25Q96BH1 459 aaPredicted RBP10.49□□□□□ -0.73
FAM208A-208ENST00000487036 GPR153Q6NV75 609 aa10.47□□□□□ -0.73
FAM208A-208ENST00000487036 SOX12O15370 315 aa10.46□□□□□ -0.73
FAM208A-208ENST00000487036 VARS2Q5ST30 1063 aaKnown RBP10.46□□□□□ -0.73
FAM208A-208ENST00000487036 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
FAM208A-208ENST00000487036 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
FAM208A-208ENST00000487036 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
FAM208A-208ENST00000487036 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.42□□□□□ -0.74
FAM208A-208ENST00000487036 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms