RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CCDC61Q9Y6R9 512 aa12.74□□□□□ -0.37
SNRNP27-204ENST00000487029 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
SNRNP27-204ENST00000487029 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
SNRNP27-204ENST00000487029 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
SNRNP27-204ENST00000487029 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
SNRNP27-204ENST00000487029 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
SNRNP27-204ENST00000487029 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
SNRNP27-204ENST00000487029 MIER1Q8N108 512 aa12.65□□□□□ -0.38
SNRNP27-204ENST00000487029 C7P10643 843 aa12.64□□□□□ -0.39
SNRNP27-204ENST00000487029 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
SNRNP27-204ENST00000487029 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
SNRNP27-204ENST00000487029 MAP3K13O43283 966 aa12.6□□□□□ -0.39
SNRNP27-204ENST00000487029 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
SNRNP27-204ENST00000487029 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
SNRNP27-204ENST00000487029 POTEMA6NI47 508 aa12.55□□□□□ -0.4
SNRNP27-204ENST00000487029 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
SNRNP27-204ENST00000487029 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
SNRNP27-204ENST00000487029 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
SNRNP27-204ENST00000487029 TIE1P35590 1138 aa12.49□□□□□ -0.41
SNRNP27-204ENST00000487029 NUBP1P53384 320 aa12.47□□□□□ -0.41
SNRNP27-204ENST00000487029 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
SNRNP27-204ENST00000487029 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
SNRNP27-204ENST00000487029 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
SNRNP27-204ENST00000487029 COLQQ9Y215 455 aaPredicted RBP12.46□□□□□ -0.41
SNRNP27-204ENST00000487029 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.42
SNRNP27-204ENST00000487029 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
SNRNP27-204ENST00000487029 FKBP8Q14318 412 aa12.39□□□□□ -0.43
SNRNP27-204ENST00000487029 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
SNRNP27-204ENST00000487029 IFNL1Q8IU54 200 aa12.37□□□□□ -0.43
SNRNP27-204ENST00000487029 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
SNRNP27-204ENST00000487029 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
SNRNP27-204ENST00000487029 SEC24BO95487 1268 aa12.34□□□□□ -0.43
SNRNP27-204ENST00000487029 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
SNRNP27-204ENST00000487029 IER5LQ5T953 404 aa12.29□□□□□ -0.44
SNRNP27-204ENST00000487029 FAM212AQ96EL1 285 aa12.29□□□□□ -0.44
SNRNP27-204ENST00000487029 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
SNRNP27-204ENST00000487029 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
SNRNP27-204ENST00000487029 PYGBP11216 843 aa12.22□□□□□ -0.45
SNRNP27-204ENST00000487029 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
SNRNP27-204ENST00000487029 IRX5P78411 483 aaPredicted RBP12.19□□□□□ -0.46
SNRNP27-204ENST00000487029 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
SNRNP27-204ENST00000487029 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
SNRNP27-204ENST00000487029 PLCG2P16885 1265 aa12.15□□□□□ -0.46
SNRNP27-204ENST00000487029 ST18O60284 1047 aa12.11□□□□□ -0.47
SNRNP27-204ENST00000487029 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
SNRNP27-204ENST00000487029 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
SNRNP27-204ENST00000487029 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
SNRNP27-204ENST00000487029 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
SNRNP27-204ENST00000487029 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
SNRNP27-204ENST00000487029 PDCD7Q8N8D1 485 aaKnown RBP12□□□□□ -0.49
SNRNP27-204ENST00000487029 GSE1Q14687 1217 aa11.97□□□□□ -0.49
SNRNP27-204ENST00000487029 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
SNRNP27-204ENST00000487029 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
SNRNP27-204ENST00000487029 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
SNRNP27-204ENST00000487029 PSEN1P49768 467 aa11.91□□□□□ -0.5
SNRNP27-204ENST00000487029 MARVELD3Q96A59 401 aa11.9□□□□□ -0.5
SNRNP27-204ENST00000487029 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
SNRNP27-204ENST00000487029 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
SNRNP27-204ENST00000487029 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
SNRNP27-204ENST00000487029 TMEM121BQ9BXQ6 578 aaPredicted RBP11.87□□□□□ -0.51
SNRNP27-204ENST00000487029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■□□□□ 8.4
SNRNP27-204ENST00000487029 SNPHO15079 494 aa11.86□□□□□ -0.51
SNRNP27-204ENST00000487029 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
SNRNP27-204ENST00000487029 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
SNRNP27-204ENST00000487029 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
SNRNP27-204ENST00000487029 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
SNRNP27-204ENST00000487029 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
SNRNP27-204ENST00000487029 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
SNRNP27-204ENST00000487029 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
SNRNP27-204ENST00000487029 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
SNRNP27-204ENST00000487029 POTEB3A0JP26 581 aa11.78□□□□□ -0.52
SNRNP27-204ENST00000487029 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
SNRNP27-204ENST00000487029 POTEBQ6S5H4 581 aa11.78□□□□□ -0.52
SNRNP27-204ENST00000487029 CABP2Q9NPB3 220 aa11.78□□□□□ -0.52
SNRNP27-204ENST00000487029 EMP3P54852 163 aa11.73□□□□□ -0.53
SNRNP27-204ENST00000487029 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
SNRNP27-204ENST00000487029 KRTAP3-3Q9BYR6 98 aa11.69□□□□□ -0.54
SNRNP27-204ENST00000487029 KRTAP3-2Q9BYR7 98 aa11.69□□□□□ -0.54
SNRNP27-204ENST00000487029 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
SNRNP27-204ENST00000487029 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
SNRNP27-204ENST00000487029 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
SNRNP27-204ENST00000487029 EFCAB3Q8N7B9 438 aa11.64□□□□□ -0.55
SNRNP27-204ENST00000487029 G3V3G9 751 aa11.6□□□□□ -0.55
SNRNP27-204ENST00000487029 HOXB1P14653 301 aaPredicted RBP11.55□□□□□ -0.56
SNRNP27-204ENST00000487029 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
SNRNP27-204ENST00000487029 RNF25Q96BH1 459 aaPredicted RBP11.55□□□□□ -0.56
SNRNP27-204ENST00000487029 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
SNRNP27-204ENST00000487029 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
SNRNP27-204ENST00000487029 MICALL2Q8IY33 904 aa11.51□□□□□ -0.57
SNRNP27-204ENST00000487029 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
SNRNP27-204ENST00000487029 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
SNRNP27-204ENST00000487029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
SNRNP27-204ENST00000487029 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
SNRNP27-204ENST00000487029 ERBB3P21860 1342 aa11.48□□□□□ -0.57
SNRNP27-204ENST00000487029 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
SNRNP27-204ENST00000487029 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
SNRNP27-204ENST00000487029 SOX12O15370 315 aa11.44□□□□□ -0.58
SNRNP27-204ENST00000487029 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
SNRNP27-204ENST00000487029 GPR153Q6NV75 609 aa11.41□□□□□ -0.58
SNRNP27-204ENST00000487029 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms