RNA–Protein interactions for RNA: ENST00000486883.5

ITCH-206, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene ITCH, Length 703 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-206ENST00000486883 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
ITCH-206ENST00000486883 NISCHQ9Y2I1 1504 aa14.31□□□□□ -0.12
ITCH-206ENST00000486883 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
ITCH-206ENST00000486883 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
ITCH-206ENST00000486883 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
ITCH-206ENST00000486883 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
ITCH-206ENST00000486883 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
ITCH-206ENST00000486883 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
ITCH-206ENST00000486883 MAP3K13O43283 966 aa14.21□□□□□ -0.13
ITCH-206ENST00000486883 SLC39A7Q92504 469 aa14.18□□□□□ -0.14
ITCH-206ENST00000486883 METRNQ9UJH8 293 aa14.18□□□□□ -0.14
ITCH-206ENST00000486883 NUBP1P53384 320 aa14.17□□□□□ -0.14
ITCH-206ENST00000486883 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
ITCH-206ENST00000486883 C7P10643 843 aa14.16□□□□□ -0.14
ITCH-206ENST00000486883 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
ITCH-206ENST00000486883 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
ITCH-206ENST00000486883 PCDHB13Q9Y5F0 798 aa14.12□□□□□ -0.15
ITCH-206ENST00000486883 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
ITCH-206ENST00000486883 BMP2KQ9NSY1 1161 aaPredicted RBP14.1□□□□□ -0.15
ITCH-206ENST00000486883 KLHL34Q8N239 644 aa14.09□□□□□ -0.15
ITCH-206ENST00000486883 TIE1P35590 1138 aa14.08□□□□□ -0.16
ITCH-206ENST00000486883 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
ITCH-206ENST00000486883 OTUD5Q96G74 571 aa14.08□□□□□ -0.16
ITCH-206ENST00000486883 SGIP1Q9BQI5 828 aa14.06□□□□□ -0.16
ITCH-206ENST00000486883 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
ITCH-206ENST00000486883 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
ITCH-206ENST00000486883 IFNL1Q8IU54 200 aa13.99□□□□□ -0.17
ITCH-206ENST00000486883 SEC24BO95487 1268 aa13.98□□□□□ -0.17
ITCH-206ENST00000486883 MAMSTRQ6ZN01 415 aa13.98□□□□□ -0.17
ITCH-206ENST00000486883 PYGBP11216 843 aa13.96□□□□□ -0.17
ITCH-206ENST00000486883 TRIM35Q9UPQ4 493 aa13.95□□□□□ -0.18
ITCH-206ENST00000486883 TMEM106CQ9BVX2 250 aa13.93□□□□□ -0.18
ITCH-206ENST00000486883 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
ITCH-206ENST00000486883 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
ITCH-206ENST00000486883 GSE1Q14687 1217 aa13.89□□□□□ -0.19
ITCH-206ENST00000486883 POTEFA5A3E0 1075 aa13.88□□□□□ -0.19
ITCH-206ENST00000486883 IER5LQ5T953 404 aa13.87□□□□□ -0.19
ITCH-206ENST00000486883 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
ITCH-206ENST00000486883 PCDHB8Q9UN66 801 aa13.85□□□□□ -0.19
ITCH-206ENST00000486883 PLCG2P16885 1265 aa13.79□□□□□ -0.2
ITCH-206ENST00000486883 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
ITCH-206ENST00000486883 ZNF467Q7Z7K2 595 aaPredicted RBP13.76□□□□□ -0.21
ITCH-206ENST00000486883 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
ITCH-206ENST00000486883 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
ITCH-206ENST00000486883 POTEMA6NI47 508 aa13.73□□□□□ -0.21
ITCH-206ENST00000486883 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
ITCH-206ENST00000486883 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
ITCH-206ENST00000486883 POTEGQ6S5H5 508 aa13.71□□□□□ -0.21
ITCH-206ENST00000486883 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
ITCH-206ENST00000486883 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
ITCH-206ENST00000486883 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
ITCH-206ENST00000486883 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
ITCH-206ENST00000486883 MKRN3Q13064 507 aaKnown RBP13.64□□□□□ -0.23
ITCH-206ENST00000486883 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
ITCH-206ENST00000486883 PSEN1P49768 467 aa13.63□□□□□ -0.23
ITCH-206ENST00000486883 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
ITCH-206ENST00000486883 ABCC9O60706 1549 aa13.55□□□□□ -0.24
ITCH-206ENST00000486883 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.54□□□□□ -0.24
ITCH-206ENST00000486883 LCE2DQ5TA82 110 aaPredicted RBP13.53□□□□□ -0.24
ITCH-206ENST00000486883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.53□□□□□ -0.244e-12■■■□□ 17.2
ITCH-206ENST00000486883 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
ITCH-206ENST00000486883 L3MBTL3Q96JM7 780 aaPredicted RBP13.49□□□□□ -0.25
ITCH-206ENST00000486883 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
ITCH-206ENST00000486883 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
ITCH-206ENST00000486883 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
ITCH-206ENST00000486883 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
ITCH-206ENST00000486883 G3V3G9 751 aa13.42□□□□□ -0.26
ITCH-206ENST00000486883 SNPHO15079 494 aa13.41□□□□□ -0.26
ITCH-206ENST00000486883 ST18O60284 1047 aa13.41□□□□□ -0.26
ITCH-206ENST00000486883 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
ITCH-206ENST00000486883 CDAN1Q8IWY9 1227 aa13.32□□□□□ -0.28
ITCH-206ENST00000486883 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
ITCH-206ENST00000486883 EFCAB3Q8N7B9 438 aa13.31□□□□□ -0.28
ITCH-206ENST00000486883 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
ITCH-206ENST00000486883 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
ITCH-206ENST00000486883 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
ITCH-206ENST00000486883 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
ITCH-206ENST00000486883 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
ITCH-206ENST00000486883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
ITCH-206ENST00000486883 RNF25Q96BH1 459 aaPredicted RBP13.23□□□□□ -0.29
ITCH-206ENST00000486883 ZFP91Q96JP5 570 aaPredicted RBP13.23□□□□□ -0.29
ITCH-206ENST00000486883 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
ITCH-206ENST00000486883 SOX12O15370 315 aa13.18□□□□□ -0.3
ITCH-206ENST00000486883 EMP3P54852 163 aa13.17□□□□□ -0.3
ITCH-206ENST00000486883 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
ITCH-206ENST00000486883 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
ITCH-206ENST00000486883 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
ITCH-206ENST00000486883 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
ITCH-206ENST00000486883 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
ITCH-206ENST00000486883 STK24Q9Y6E0 443 aa13.1□□□□□ -0.31
ITCH-206ENST00000486883 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
ITCH-206ENST00000486883 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
ITCH-206ENST00000486883 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
ITCH-206ENST00000486883 NLRP6P59044 892 aa13.06□□□□□ -0.32
ITCH-206ENST00000486883 STK25O00506 426 aa13.05□□□□□ -0.32
ITCH-206ENST00000486883 MS4A4AQ96JQ5 239 aa13.05□□□□□ -0.32
ITCH-206ENST00000486883 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
ITCH-206ENST00000486883 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
ITCH-206ENST00000486883 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
ITCH-206ENST00000486883 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms