RNA–Protein interactions for RNA: ENST00000486539.1

CACNA2D1-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 5

Gene CACNA2D1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-211ENST00000486539 ATMINO43313 823 aaPredicted RBP15.89■□□□□ 0.13
CACNA2D1-211ENST00000486539 SCUBE2Q9NQ36 999 aa15.88■□□□□ 0.13
CACNA2D1-211ENST00000486539 MS4A3Q96HJ5 214 aa15.85■□□□□ 0.13
CACNA2D1-211ENST00000486539 POTEJP0CG39 1038 aa15.84■□□□□ 0.13
CACNA2D1-211ENST00000486539 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
CACNA2D1-211ENST00000486539 FAM163AQ96GL9 167 aaPredicted RBP15.8■□□□□ 0.12
CACNA2D1-211ENST00000486539 LCE2DQ5TA82 110 aaPredicted RBP15.78■□□□□ 0.12
CACNA2D1-211ENST00000486539 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
CACNA2D1-211ENST00000486539 ATN1P54259 1190 aaPredicted RBP15.66■□□□□ 0.1
CACNA2D1-211ENST00000486539 CCDC61Q9Y6R9 512 aa15.59■□□□□ 0.09
CACNA2D1-211ENST00000486539 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
CACNA2D1-211ENST00000486539 CDAN1Q8IWY9 1227 aa15.56■□□□□ 0.08
CACNA2D1-211ENST00000486539 KIF12Q96FN5 646 aa15.54■□□□□ 0.08
CACNA2D1-211ENST00000486539 BMP2KQ9NSY1 1161 aaPredicted RBP15.53■□□□□ 0.08
CACNA2D1-211ENST00000486539 POTEFA5A3E0 1075 aa15.52■□□□□ 0.08
CACNA2D1-211ENST00000486539 TIE1P35590 1138 aa15.52■□□□□ 0.08
CACNA2D1-211ENST00000486539 SEC24BO95487 1268 aa15.47■□□□□ 0.07
CACNA2D1-211ENST00000486539 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
CACNA2D1-211ENST00000486539 IER5LQ5T953 404 aa15.39■□□□□ 0.05
CACNA2D1-211ENST00000486539 MAP3K13O43283 966 aa15.37■□□□□ 0.05
CACNA2D1-211ENST00000486539 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
CACNA2D1-211ENST00000486539 TRPC6Q9Y210 931 aa15.36■□□□□ 0.05
CACNA2D1-211ENST00000486539 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
CACNA2D1-211ENST00000486539 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
CACNA2D1-211ENST00000486539 ST18O60284 1047 aa15.29■□□□□ 0.04
CACNA2D1-211ENST00000486539 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
CACNA2D1-211ENST00000486539 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
CACNA2D1-211ENST00000486539 PROM2Q8N271 834 aa15.26■□□□□ 0.03
CACNA2D1-211ENST00000486539 TRIM35Q9UPQ4 493 aa15.26■□□□□ 0.03
CACNA2D1-211ENST00000486539 MMRN1Q13201 1228 aa15.23■□□□□ 0.03
CACNA2D1-211ENST00000486539 TMEM121BQ9BXQ6 578 aaPredicted RBP15.22■□□□□ 0.03
CACNA2D1-211ENST00000486539 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
CACNA2D1-211ENST00000486539 SPNS2Q8IVW8 549 aa15.18■□□□□ 0.02
CACNA2D1-211ENST00000486539 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
CACNA2D1-211ENST00000486539 SNPHO15079 494 aa15.14■□□□□ 0.01
CACNA2D1-211ENST00000486539 PLCG2P16885 1265 aa15.14■□□□□ 0.01
CACNA2D1-211ENST00000486539 MIER1Q8N108 512 aa15.14■□□□□ 0.01
CACNA2D1-211ENST00000486539 TMEM106CQ9BVX2 250 aa15.04■□□□□ -0
CACNA2D1-211ENST00000486539 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
CACNA2D1-211ENST00000486539 IRX5P78411 483 aaPredicted RBP15.01□□□□□ -0.01
CACNA2D1-211ENST00000486539 IFNL1Q8IU54 200 aa15□□□□□ -0.01
CACNA2D1-211ENST00000486539 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.98□□□□□ -0.01
CACNA2D1-211ENST00000486539 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
CACNA2D1-211ENST00000486539 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
CACNA2D1-211ENST00000486539 MARVELD3Q96A59 401 aa14.91□□□□□ -0.02
CACNA2D1-211ENST00000486539 FAM212AQ96EL1 285 aa14.91□□□□□ -0.02
CACNA2D1-211ENST00000486539 NUBP1P53384 320 aa14.89□□□□□ -0.03
CACNA2D1-211ENST00000486539 EMP3P54852 163 aa14.84□□□□□ -0.03
CACNA2D1-211ENST00000486539 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
CACNA2D1-211ENST00000486539 C3orf67Q6ZVT6 689 aa14.76□□□□□ -0.05
CACNA2D1-211ENST00000486539 HS3ST6Q96QI5 342 aa14.73□□□□□ -0.05
CACNA2D1-211ENST00000486539 KRTAP3-3Q9BYR6 98 aa14.73□□□□□ -0.05
CACNA2D1-211ENST00000486539 KRTAP3-2Q9BYR7 98 aa14.73□□□□□ -0.05
CACNA2D1-211ENST00000486539 L3MBTL3Q96JM7 780 aaPredicted RBP14.72□□□□□ -0.05
CACNA2D1-211ENST00000486539 FAM205CA6NFA0 338 aa14.67□□□□□ -0.06
CACNA2D1-211ENST00000486539 PDCD7Q8N8D1 485 aaKnown RBP14.63□□□□□ -0.07
CACNA2D1-211ENST00000486539 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
CACNA2D1-211ENST00000486539 POTEB3A0JP26 581 aa14.6□□□□□ -0.07
CACNA2D1-211ENST00000486539 PYGBP11216 843 aa14.6□□□□□ -0.07
CACNA2D1-211ENST00000486539 MKRN3Q13064 507 aaKnown RBP14.6□□□□□ -0.07
CACNA2D1-211ENST00000486539 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
CACNA2D1-211ENST00000486539 POTEBQ6S5H4 581 aa14.6□□□□□ -0.07
CACNA2D1-211ENST00000486539 PCDHB8Q9UN66 801 aa14.57□□□□□ -0.08
CACNA2D1-211ENST00000486539 ZNF467Q7Z7K2 595 aaPredicted RBP14.52□□□□□ -0.09
CACNA2D1-211ENST00000486539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.09
CACNA2D1-211ENST00000486539 RNF166Q96A37 237 aaPredicted RBP14.48□□□□□ -0.09
CACNA2D1-211ENST00000486539 HOXB1P14653 301 aaPredicted RBP14.41□□□□□ -0.1
CACNA2D1-211ENST00000486539 ZNF710Q8N1W2 664 aa14.41□□□□□ -0.1
CACNA2D1-211ENST00000486539 G3V3G9 751 aa14.4□□□□□ -0.1
CACNA2D1-211ENST00000486539 ILDR1Q86SU0 546 aaPredicted RBP14.39□□□□□ -0.11
CACNA2D1-211ENST00000486539 ERBB3P21860 1342 aa14.39□□□□□ -0.11
CACNA2D1-211ENST00000486539 GSE1Q14687 1217 aa14.38□□□□□ -0.11
CACNA2D1-211ENST00000486539 HOXB3P14651 431 aaPredicted RBP14.37□□□□□ -0.11
CACNA2D1-211ENST00000486539 DOK7Q18PE1 504 aa14.36□□□□□ -0.11
CACNA2D1-211ENST00000486539 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
CACNA2D1-211ENST00000486539 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.12
CACNA2D1-211ENST00000486539 PSEN1P49768 467 aa14.33□□□□□ -0.12
CACNA2D1-211ENST00000486539 BOLA1Q9Y3E2 137 aa14.32□□□□□ -0.12
CACNA2D1-211ENST00000486539 RIMBP2O15034 1052 aa14.31□□□□□ -0.12
CACNA2D1-211ENST00000486539 PTGER2P43116 358 aa14.31□□□□□ -0.12
CACNA2D1-211ENST00000486539 PDAP1Q13442 181 aaKnown RBP14.23□□□□□ -0.13
CACNA2D1-211ENST00000486539 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
CACNA2D1-211ENST00000486539 DPY19L2Q6NUT2 758 aa14.23□□□□□ -0.13
CACNA2D1-211ENST00000486539 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
CACNA2D1-211ENST00000486539 ZNF687Q8N1G0 1237 aa14.2□□□□□ -0.14
CACNA2D1-211ENST00000486539 ZSWIM6Q9HCJ5 1215 aa14.2□□□□□ -0.14
CACNA2D1-211ENST00000486539 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
CACNA2D1-211ENST00000486539 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
CACNA2D1-211ENST00000486539 FKBP8Q14318 412 aa14.08□□□□□ -0.16
CACNA2D1-211ENST00000486539 GPR153Q6NV75 609 aa14.01□□□□□ -0.17
CACNA2D1-211ENST00000486539 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
CACNA2D1-211ENST00000486539 VASPP50552 380 aaPredicted RBP13.96□□□□□ -0.17
CACNA2D1-211ENST00000486539 LSM11P83369 360 aaKnown RBP eCLIP13.92□□□□□ -0.18
CACNA2D1-211ENST00000486539 PLA2G2EQ9NZK7 142 aa13.92□□□□□ -0.18
CACNA2D1-211ENST00000486539 MICALL2Q8IY33 904 aa13.91□□□□□ -0.18
CACNA2D1-211ENST00000486539 TMEM92Q6UXU6 159 aa13.88□□□□□ -0.19
CACNA2D1-211ENST00000486539 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
CACNA2D1-211ENST00000486539 PBX2P40425 430 aa13.86□□□□□ -0.19
CACNA2D1-211ENST00000486539 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
CACNA2D1-211ENST00000486539 HCSTQ9UBK5 93 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms