RNA–Protein interactions for RNA: ENST00000486198.1

NCOA1-209, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 2

Gene NCOA1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-209ENST00000486198 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
NCOA1-209ENST00000486198 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
NCOA1-209ENST00000486198 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
NCOA1-209ENST00000486198 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
NCOA1-209ENST00000486198 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
NCOA1-209ENST00000486198 LHX8Q68G74 356 aa12.87□□□□□ -0.35
NCOA1-209ENST00000486198 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
NCOA1-209ENST00000486198 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
NCOA1-209ENST00000486198 NISCHQ9Y2I1 1504 aa12.83□□□□□ -0.36
NCOA1-209ENST00000486198 GSE1Q14687 1217 aa12.82□□□□□ -0.36
NCOA1-209ENST00000486198 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
NCOA1-209ENST00000486198 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
NCOA1-209ENST00000486198 MAP3K13O43283 966 aa12.79□□□□□ -0.36
NCOA1-209ENST00000486198 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
NCOA1-209ENST00000486198 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
NCOA1-209ENST00000486198 PYGBP11216 843 aa12.73□□□□□ -0.37
NCOA1-209ENST00000486198 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
NCOA1-209ENST00000486198 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
NCOA1-209ENST00000486198 CHRM1P11229 460 aaPredicted RBP12.66□□□□□ -0.38
NCOA1-209ENST00000486198 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
NCOA1-209ENST00000486198 ASTLQ6HA08 431 aaPredicted RBP12.65□□□□□ -0.38
NCOA1-209ENST00000486198 TIE1P35590 1138 aa12.64□□□□□ -0.39
NCOA1-209ENST00000486198 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
NCOA1-209ENST00000486198 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
NCOA1-209ENST00000486198 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
NCOA1-209ENST00000486198 BMP2KQ9NSY1 1161 aaPredicted RBP12.61□□□□□ -0.39
NCOA1-209ENST00000486198 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
NCOA1-209ENST00000486198 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
NCOA1-209ENST00000486198 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
NCOA1-209ENST00000486198 PCDHB8Q9UN66 801 aa12.58□□□□□ -0.4
NCOA1-209ENST00000486198 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
NCOA1-209ENST00000486198 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
NCOA1-209ENST00000486198 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
NCOA1-209ENST00000486198 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
NCOA1-209ENST00000486198 C7P10643 843 aa12.51□□□□□ -0.41
NCOA1-209ENST00000486198 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
NCOA1-209ENST00000486198 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
NCOA1-209ENST00000486198 PSEN1P49768 467 aa12.44□□□□□ -0.42
NCOA1-209ENST00000486198 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
NCOA1-209ENST00000486198 IER5LQ5T953 404 aa12.43□□□□□ -0.42
NCOA1-209ENST00000486198 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
NCOA1-209ENST00000486198 ECM2O94769 699 aaPredicted RBP12.39□□□□□ -0.43
NCOA1-209ENST00000486198 PKD2Q13563 968 aa12.39□□□□□ -0.43
NCOA1-209ENST00000486198 SEC24BO95487 1268 aa12.37□□□□□ -0.43
NCOA1-209ENST00000486198 RNF25Q96BH1 459 aaPredicted RBP12.37□□□□□ -0.43
NCOA1-209ENST00000486198 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
NCOA1-209ENST00000486198 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
NCOA1-209ENST00000486198 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
NCOA1-209ENST00000486198 VGFO15240 615 aaPredicted RBP12.33□□□□□ -0.44
NCOA1-209ENST00000486198 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
NCOA1-209ENST00000486198 COLQQ9Y215 455 aaPredicted RBP12.32□□□□□ -0.44
NCOA1-209ENST00000486198 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
NCOA1-209ENST00000486198 PLCG2P16885 1265 aa12.3□□□□□ -0.44
NCOA1-209ENST00000486198 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
NCOA1-209ENST00000486198 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
NCOA1-209ENST00000486198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
NCOA1-209ENST00000486198 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
NCOA1-209ENST00000486198 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
NCOA1-209ENST00000486198 RGL2O15211 777 aa12.25□□□□□ -0.45
NCOA1-209ENST00000486198 MAMSTRQ6ZN01 415 aa12.25□□□□□ -0.45
NCOA1-209ENST00000486198 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
NCOA1-209ENST00000486198 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
NCOA1-209ENST00000486198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.45
NCOA1-209ENST00000486198 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
NCOA1-209ENST00000486198 EFCAB3Q8N7B9 438 aa12.18□□□□□ -0.46
NCOA1-209ENST00000486198 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
NCOA1-209ENST00000486198 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
NCOA1-209ENST00000486198 STK25O00506 426 aa12.16□□□□□ -0.46
NCOA1-209ENST00000486198 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
NCOA1-209ENST00000486198 POTEMA6NI47 508 aa12.15□□□□□ -0.46
NCOA1-209ENST00000486198 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
NCOA1-209ENST00000486198 SOX12O15370 315 aa12.13□□□□□ -0.47
NCOA1-209ENST00000486198 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
NCOA1-209ENST00000486198 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
NCOA1-209ENST00000486198 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
NCOA1-209ENST00000486198 G3V3G9 751 aa12.04□□□□□ -0.48
NCOA1-209ENST00000486198 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
NCOA1-209ENST00000486198 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
NCOA1-209ENST00000486198 NLRP6P59044 892 aa12.03□□□□□ -0.48
NCOA1-209ENST00000486198 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
NCOA1-209ENST00000486198 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
NCOA1-209ENST00000486198 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
NCOA1-209ENST00000486198 SLAIN1Q8ND83 568 aa12.01□□□□□ -0.49
NCOA1-209ENST00000486198 BOLA1Q9Y3E2 137 aa12.01□□□□□ -0.49
NCOA1-209ENST00000486198 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
NCOA1-209ENST00000486198 MS4A4AQ96JQ5 239 aa11.99□□□□□ -0.49
NCOA1-209ENST00000486198 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
NCOA1-209ENST00000486198 FBXO22Q8NEZ5 403 aa11.98□□□□□ -0.49
NCOA1-209ENST00000486198 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
NCOA1-209ENST00000486198 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
NCOA1-209ENST00000486198 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
NCOA1-209ENST00000486198 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
NCOA1-209ENST00000486198 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
NCOA1-209ENST00000486198 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
NCOA1-209ENST00000486198 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
NCOA1-209ENST00000486198 SNPHO15079 494 aa11.85□□□□□ -0.51
NCOA1-209ENST00000486198 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
NCOA1-209ENST00000486198 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
NCOA1-209ENST00000486198 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
NCOA1-209ENST00000486198 PPP1R37O75864 691 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms