RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 PROM2Q8N271 834 aa13.5□□□□□ -0.25
PHC3-211ENST00000486042 SLC39A7Q92504 469 aa13.5□□□□□ -0.25
PHC3-211ENST00000486042 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
PHC3-211ENST00000486042 POTEMA6NI47 508 aa13.45□□□□□ -0.26
PHC3-211ENST00000486042 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
PHC3-211ENST00000486042 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
PHC3-211ENST00000486042 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
PHC3-211ENST00000486042 POTEGQ6S5H5 508 aa13.41□□□□□ -0.26
PHC3-211ENST00000486042 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
PHC3-211ENST00000486042 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
PHC3-211ENST00000486042 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
PHC3-211ENST00000486042 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
PHC3-211ENST00000486042 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
PHC3-211ENST00000486042 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
PHC3-211ENST00000486042 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
PHC3-211ENST00000486042 TIE1P35590 1138 aa13.27□□□□□ -0.29
PHC3-211ENST00000486042 MIER1Q8N108 512 aa13.27□□□□□ -0.29
PHC3-211ENST00000486042 MAP3K13O43283 966 aa13.25□□□□□ -0.29
PHC3-211ENST00000486042 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
PHC3-211ENST00000486042 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
PHC3-211ENST00000486042 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
PHC3-211ENST00000486042 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
PHC3-211ENST00000486042 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
PHC3-211ENST00000486042 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
PHC3-211ENST00000486042 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
PHC3-211ENST00000486042 SEC24BO95487 1268 aa13.13□□□□□ -0.31
PHC3-211ENST00000486042 IER5LQ5T953 404 aa13.11□□□□□ -0.31
PHC3-211ENST00000486042 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
PHC3-211ENST00000486042 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
PHC3-211ENST00000486042 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
PHC3-211ENST00000486042 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
PHC3-211ENST00000486042 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
PHC3-211ENST00000486042 NUBP1P53384 320 aa13.04□□□□□ -0.32
PHC3-211ENST00000486042 IFNL1Q8IU54 200 aa12.98□□□□□ -0.33
PHC3-211ENST00000486042 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
PHC3-211ENST00000486042 TMEM106CQ9BVX2 250 aa12.94□□□□□ -0.34
PHC3-211ENST00000486042 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
PHC3-211ENST00000486042 PLCG2P16885 1265 aa12.91□□□□□ -0.34
PHC3-211ENST00000486042 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
PHC3-211ENST00000486042 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
PHC3-211ENST00000486042 ST18O60284 1047 aa12.85□□□□□ -0.35
PHC3-211ENST00000486042 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
PHC3-211ENST00000486042 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
PHC3-211ENST00000486042 FKBP8Q14318 412 aa12.77□□□□□ -0.37
PHC3-211ENST00000486042 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
PHC3-211ENST00000486042 SNPHO15079 494 aa12.76□□□□□ -0.37
PHC3-211ENST00000486042 PYGBP11216 843 aa12.76□□□□□ -0.37
PHC3-211ENST00000486042 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
PHC3-211ENST00000486042 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
PHC3-211ENST00000486042 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
PHC3-211ENST00000486042 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
PHC3-211ENST00000486042 GSE1Q14687 1217 aa12.63□□□□□ -0.39
PHC3-211ENST00000486042 SPNS2Q8IVW8 549 aa12.61□□□□□ -0.39
PHC3-211ENST00000486042 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
PHC3-211ENST00000486042 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
PHC3-211ENST00000486042 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
PHC3-211ENST00000486042 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
PHC3-211ENST00000486042 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
PHC3-211ENST00000486042 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
PHC3-211ENST00000486042 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
PHC3-211ENST00000486042 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
PHC3-211ENST00000486042 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
PHC3-211ENST00000486042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.412e-7■■■■□ 20.2
PHC3-211ENST00000486042 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
PHC3-211ENST00000486042 PSEN1P49768 467 aa12.5□□□□□ -0.41
PHC3-211ENST00000486042 EMP3P54852 163 aa12.49□□□□□ -0.41
PHC3-211ENST00000486042 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
PHC3-211ENST00000486042 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
PHC3-211ENST00000486042 HS3ST6Q96QI5 342 aa12.41□□□□□ -0.42
PHC3-211ENST00000486042 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
PHC3-211ENST00000486042 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
PHC3-211ENST00000486042 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
PHC3-211ENST00000486042 KRTAP3-3Q9BYR6 98 aa12.38□□□□□ -0.43
PHC3-211ENST00000486042 KRTAP3-2Q9BYR7 98 aa12.38□□□□□ -0.43
PHC3-211ENST00000486042 G3V3G9 751 aa12.35□□□□□ -0.43
PHC3-211ENST00000486042 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
PHC3-211ENST00000486042 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
PHC3-211ENST00000486042 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
PHC3-211ENST00000486042 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
PHC3-211ENST00000486042 HOXB3P14651 431 aaPredicted RBP12.3□□□□□ -0.44
PHC3-211ENST00000486042 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
PHC3-211ENST00000486042 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
PHC3-211ENST00000486042 ZNF710Q8N1W2 664 aa12.26□□□□□ -0.45
PHC3-211ENST00000486042 DOK7Q18PE1 504 aa12.25□□□□□ -0.45
PHC3-211ENST00000486042 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
PHC3-211ENST00000486042 ERBB3P21860 1342 aa12.19□□□□□ -0.46
PHC3-211ENST00000486042 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
PHC3-211ENST00000486042 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
PHC3-211ENST00000486042 EFCAB3Q8N7B9 438 aa12.15□□□□□ -0.46
PHC3-211ENST00000486042 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
PHC3-211ENST00000486042 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
PHC3-211ENST00000486042 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
PHC3-211ENST00000486042 RNF166Q96A37 237 aaPredicted RBP12.08□□□□□ -0.48
PHC3-211ENST00000486042 SOX12O15370 315 aa12.07□□□□□ -0.48
PHC3-211ENST00000486042 ZNF687Q8N1G0 1237 aa12.07□□□□□ -0.48
PHC3-211ENST00000486042 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
PHC3-211ENST00000486042 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
PHC3-211ENST00000486042 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
PHC3-211ENST00000486042 PTGER2P43116 358 aa12□□□□□ -0.49
PHC3-211ENST00000486042 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms