RNA–Protein interactions for RNA: ENST00000486007.1

NDUFA4-205, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 434 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-205ENST00000486007 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
NDUFA4-205ENST00000486007 LHX8Q68G74 356 aa12.65□□□□□ -0.38
NDUFA4-205ENST00000486007 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
NDUFA4-205ENST00000486007 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
NDUFA4-205ENST00000486007 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
NDUFA4-205ENST00000486007 NUBP1P53384 320 aa12.58□□□□□ -0.4
NDUFA4-205ENST00000486007 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
NDUFA4-205ENST00000486007 ABCC9O60706 1549 aa12.56□□□□□ -0.4
NDUFA4-205ENST00000486007 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
NDUFA4-205ENST00000486007 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
NDUFA4-205ENST00000486007 MAP3K13O43283 966 aa12.5□□□□□ -0.41
NDUFA4-205ENST00000486007 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
NDUFA4-205ENST00000486007 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
NDUFA4-205ENST00000486007 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
NDUFA4-205ENST00000486007 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
NDUFA4-205ENST00000486007 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
NDUFA4-205ENST00000486007 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
NDUFA4-205ENST00000486007 TIE1P35590 1138 aa12.44□□□□□ -0.42
NDUFA4-205ENST00000486007 PCDHB13Q9Y5F0 798 aa12.44□□□□□ -0.42
NDUFA4-205ENST00000486007 C7P10643 843 aa12.43□□□□□ -0.42
NDUFA4-205ENST00000486007 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
NDUFA4-205ENST00000486007 METRNQ9UJH8 293 aa12.41□□□□□ -0.42
NDUFA4-205ENST00000486007 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
NDUFA4-205ENST00000486007 ATN1P54259 1190 aaPredicted RBP12.39□□□□□ -0.43
NDUFA4-205ENST00000486007 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
NDUFA4-205ENST00000486007 GSE1Q14687 1217 aa12.36□□□□□ -0.43
NDUFA4-205ENST00000486007 IFNL1Q8IU54 200 aa12.34□□□□□ -0.43
NDUFA4-205ENST00000486007 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
NDUFA4-205ENST00000486007 PYGBP11216 843 aa12.32□□□□□ -0.44
NDUFA4-205ENST00000486007 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
NDUFA4-205ENST00000486007 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
NDUFA4-205ENST00000486007 SPOCK2Q92563 424 aa12.28□□□□□ -0.44
NDUFA4-205ENST00000486007 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
NDUFA4-205ENST00000486007 IER5LQ5T953 404 aa12.26□□□□□ -0.45
NDUFA4-205ENST00000486007 TMEM106CQ9BVX2 250 aa12.26□□□□□ -0.45
NDUFA4-205ENST00000486007 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
NDUFA4-205ENST00000486007 MAMSTRQ6ZN01 415 aa12.25□□□□□ -0.45
NDUFA4-205ENST00000486007 SEC24BO95487 1268 aa12.23□□□□□ -0.45
NDUFA4-205ENST00000486007 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
NDUFA4-205ENST00000486007 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
NDUFA4-205ENST00000486007 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
NDUFA4-205ENST00000486007 PCDHB8Q9UN66 801 aa12.19□□□□□ -0.46
NDUFA4-205ENST00000486007 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
NDUFA4-205ENST00000486007 CIZ1Q9ULV3 898 aaPredicted RBP12.17□□□□□ -0.46
NDUFA4-205ENST00000486007 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
NDUFA4-205ENST00000486007 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
NDUFA4-205ENST00000486007 PLCG2P16885 1265 aa12.11□□□□□ -0.47
NDUFA4-205ENST00000486007 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
NDUFA4-205ENST00000486007 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
NDUFA4-205ENST00000486007 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
NDUFA4-205ENST00000486007 PSEN1P49768 467 aa12.06□□□□□ -0.48
NDUFA4-205ENST00000486007 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
NDUFA4-205ENST00000486007 PDAP1Q13442 181 aaKnown RBP12.05□□□□□ -0.48
NDUFA4-205ENST00000486007 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
NDUFA4-205ENST00000486007 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
NDUFA4-205ENST00000486007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
NDUFA4-205ENST00000486007 PDCD7Q8N8D1 485 aaKnown RBP11.91□□□□□ -0.5
NDUFA4-205ENST00000486007 SLAIN1Q8ND83 568 aa11.91□□□□□ -0.5
NDUFA4-205ENST00000486007 CABP2Q9NPB3 220 aa11.9□□□□□ -0.5
NDUFA4-205ENST00000486007 POTEMA6NI47 508 aa11.89□□□□□ -0.51
NDUFA4-205ENST00000486007 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
NDUFA4-205ENST00000486007 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
NDUFA4-205ENST00000486007 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
NDUFA4-205ENST00000486007 RIOK3O14730 519 aaKnown RBP11.87□□□□□ -0.51
NDUFA4-205ENST00000486007 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
NDUFA4-205ENST00000486007 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
NDUFA4-205ENST00000486007 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
NDUFA4-205ENST00000486007 VGFO15240 615 aaPredicted RBP11.82□□□□□ -0.52
NDUFA4-205ENST00000486007 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
NDUFA4-205ENST00000486007 TAOK2Q9UL54 1235 aa11.81□□□□□ -0.52
NDUFA4-205ENST00000486007 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
NDUFA4-205ENST00000486007 G3V3G9 751 aa11.79□□□□□ -0.52
NDUFA4-205ENST00000486007 NACADO15069 1562 aa11.79□□□□□ -0.52
NDUFA4-205ENST00000486007 SNPHO15079 494 aa11.78□□□□□ -0.52
NDUFA4-205ENST00000486007 PCDH10Q9P2E7 1040 aa11.78□□□□□ -0.52
NDUFA4-205ENST00000486007 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
NDUFA4-205ENST00000486007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
NDUFA4-205ENST00000486007 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
NDUFA4-205ENST00000486007 BOLA1Q9Y3E2 137 aa11.74□□□□□ -0.53
NDUFA4-205ENST00000486007 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
NDUFA4-205ENST00000486007 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
NDUFA4-205ENST00000486007 SOX12O15370 315 aa11.72□□□□□ -0.53
NDUFA4-205ENST00000486007 ST18O60284 1047 aa11.7□□□□□ -0.54
NDUFA4-205ENST00000486007 TMEM121BQ9BXQ6 578 aaPredicted RBP11.69□□□□□ -0.54
NDUFA4-205ENST00000486007 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
NDUFA4-205ENST00000486007 UNC13AQ9UPW8 1703 aa11.66□□□□□ -0.54
NDUFA4-205ENST00000486007 PKD2Q13563 968 aa11.65□□□□□ -0.54
NDUFA4-205ENST00000486007 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
NDUFA4-205ENST00000486007 STK24Q9Y6E0 443 aa11.63□□□□□ -0.55
NDUFA4-205ENST00000486007 STK25O00506 426 aa11.61□□□□□ -0.55
NDUFA4-205ENST00000486007 PHF8Q9UPP1 1060 aa11.61□□□□□ -0.55
NDUFA4-205ENST00000486007 NLRP6P59044 892 aa11.6□□□□□ -0.55
NDUFA4-205ENST00000486007 DCAF8L2P0C7V8 631 aa11.59□□□□□ -0.55
NDUFA4-205ENST00000486007 RGL2O15211 777 aa11.58□□□□□ -0.56
NDUFA4-205ENST00000486007 MICALL2Q8IY33 904 aa11.58□□□□□ -0.56
NDUFA4-205ENST00000486007 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.56
NDUFA4-205ENST00000486007 MYO15BQ96JP2 1530 aa11.57□□□□□ -0.56
NDUFA4-205ENST00000486007 CDAN1Q8IWY9 1227 aa11.56□□□□□ -0.56
NDUFA4-205ENST00000486007 BICRAQ9NZM4 1560 aa11.55□□□□□ -0.56
NDUFA4-205ENST00000486007 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms