RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
SPTLC3-206ENST00000485952 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
SPTLC3-206ENST00000485952 FXR2P51116 673 aaKnown RBP eCLIP10.67□□□□□ -0.7
SPTLC3-206ENST00000485952 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
SPTLC3-206ENST00000485952 CHGAP10645 457 aaKnown RBP10.65□□□□□ -0.7
SPTLC3-206ENST00000485952 CHRM1P11229 460 aaPredicted RBP10.65□□□□□ -0.7
SPTLC3-206ENST00000485952 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
SPTLC3-206ENST00000485952 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
SPTLC3-206ENST00000485952 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
SPTLC3-206ENST00000485952 PYGBP11216 843 aa10.59□□□□□ -0.71
SPTLC3-206ENST00000485952 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
SPTLC3-206ENST00000485952 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
SPTLC3-206ENST00000485952 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
SPTLC3-206ENST00000485952 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-206ENST00000485952 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
SPTLC3-206ENST00000485952 PAXIP1Q6ZW49 1069 aaPredicted RBP10.56□□□□□ -0.72
SPTLC3-206ENST00000485952 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
SPTLC3-206ENST00000485952 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
SPTLC3-206ENST00000485952 STK25O00506 426 aa10.51□□□□□ -0.73
SPTLC3-206ENST00000485952 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
SPTLC3-206ENST00000485952 SGIP1Q9BQI5 828 aa10.49□□□□□ -0.73
SPTLC3-206ENST00000485952 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
SPTLC3-206ENST00000485952 CCDC61Q9Y6R9 512 aa10.49□□□□□ -0.73
SPTLC3-206ENST00000485952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.46□□□□□ -0.73
SPTLC3-206ENST00000485952 ZFP91Q96JP5 570 aaPredicted RBP10.46□□□□□ -0.73
SPTLC3-206ENST00000485952 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
SPTLC3-206ENST00000485952 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
SPTLC3-206ENST00000485952 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
SPTLC3-206ENST00000485952 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
SPTLC3-206ENST00000485952 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
SPTLC3-206ENST00000485952 PDAP1Q13442 181 aaKnown RBP10.4□□□□□ -0.74
SPTLC3-206ENST00000485952 ZRANB1Q9UGI0 708 aa10.4□□□□□ -0.74
SPTLC3-206ENST00000485952 RYDENQ9NUL5 291 aaKnown RBP10.39□□□□□ -0.75
SPTLC3-206ENST00000485952 PCDHB8Q9UN66 801 aa10.39□□□□□ -0.75
SPTLC3-206ENST00000485952 PCDHB13Q9Y5F0 798 aa10.39□□□□□ -0.75
SPTLC3-206ENST00000485952 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
SPTLC3-206ENST00000485952 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
SPTLC3-206ENST00000485952 MAP3K13O43283 966 aa10.35□□□□□ -0.75
SPTLC3-206ENST00000485952 PSEN1P49768 467 aa10.35□□□□□ -0.75
SPTLC3-206ENST00000485952 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
SPTLC3-206ENST00000485952 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
SPTLC3-206ENST00000485952 GTPBP6O43824 516 aaPredicted RBP10.33□□□□□ -0.76
SPTLC3-206ENST00000485952 KDM2AQ9Y2K7 1162 aa10.32□□□□□ -0.76
SPTLC3-206ENST00000485952 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
SPTLC3-206ENST00000485952 BCANQ96GW7 911 aa10.29□□□□□ -0.76
SPTLC3-206ENST00000485952 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
SPTLC3-206ENST00000485952 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
SPTLC3-206ENST00000485952 HAX1O00165 279 aa10.2□□□□□ -0.78
SPTLC3-206ENST00000485952 SOX12O15370 315 aa10.19□□□□□ -0.78
SPTLC3-206ENST00000485952 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
SPTLC3-206ENST00000485952 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
SPTLC3-206ENST00000485952 MS4A3Q96HJ5 214 aa10.18□□□□□ -0.78
SPTLC3-206ENST00000485952 MFRPQ9BY79 579 aa10.18□□□□□ -0.78
SPTLC3-206ENST00000485952 NLRP6P59044 892 aa10.17□□□□□ -0.78
SPTLC3-206ENST00000485952 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
SPTLC3-206ENST00000485952 CLCN6P51797 869 aa10.15□□□□□ -0.78
SPTLC3-206ENST00000485952 PRKCSHP14314 528 aaPredicted RBP10.12□□□□□ -0.79
SPTLC3-206ENST00000485952 TIE1P35590 1138 aa10.12□□□□□ -0.79
SPTLC3-206ENST00000485952 MKRN3Q13064 507 aaKnown RBP10.11□□□□□ -0.79
SPTLC3-206ENST00000485952 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
SPTLC3-206ENST00000485952 FBXO22Q8NEZ5 403 aa10.1□□□□□ -0.79
SPTLC3-206ENST00000485952 TRPC6Q9Y210 931 aa10.1□□□□□ -0.79
SPTLC3-206ENST00000485952 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
SPTLC3-206ENST00000485952 TTLL13PA6NNM8 815 aa10.06□□□□□ -0.8
SPTLC3-206ENST00000485952 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
SPTLC3-206ENST00000485952 PPP1R37O75864 691 aa10.04□□□□□ -0.8
SPTLC3-206ENST00000485952 EVX2Q03828 476 aa10.04□□□□□ -0.8
SPTLC3-206ENST00000485952 NBR1Q14596 966 aa10.04□□□□□ -0.8
SPTLC3-206ENST00000485952 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
SPTLC3-206ENST00000485952 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
SPTLC3-206ENST00000485952 P3H3Q8IVL6 736 aa10.01□□□□□ -0.81
SPTLC3-206ENST00000485952 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
SPTLC3-206ENST00000485952 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
SPTLC3-206ENST00000485952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10□□□□□ -0.812e-6■■□□□ 12.1
SPTLC3-206ENST00000485952 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
SPTLC3-206ENST00000485952 POTEHQ6S545 545 aa9.97□□□□□ -0.81
SPTLC3-206ENST00000485952 ILDR1Q86SU0 546 aaPredicted RBP9.94□□□□□ -0.82
SPTLC3-206ENST00000485952 ATMINO43313 823 aaPredicted RBP9.93□□□□□ -0.82
SPTLC3-206ENST00000485952 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
SPTLC3-206ENST00000485952 ASTLQ6HA08 431 aaPredicted RBP9.93□□□□□ -0.82
SPTLC3-206ENST00000485952 GABBR2O75899 941 aa9.92□□□□□ -0.82
SPTLC3-206ENST00000485952 PDE4AP27815 886 aa9.92□□□□□ -0.82
SPTLC3-206ENST00000485952 IER5LQ5T953 404 aa9.91□□□□□ -0.82
SPTLC3-206ENST00000485952 DCBLD2Q96PD2 775 aa9.9□□□□□ -0.82
SPTLC3-206ENST00000485952 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
SPTLC3-206ENST00000485952 E2F4Q16254 413 aa9.88□□□□□ -0.83
SPTLC3-206ENST00000485952 LARP6Q9BRS8 491 aaKnown RBP9.88□□□□□ -0.83
SPTLC3-206ENST00000485952 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
SPTLC3-206ENST00000485952 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
SPTLC3-206ENST00000485952 G3V3G9 751 aa9.86□□□□□ -0.83
SPTLC3-206ENST00000485952 IRX5P78411 483 aaPredicted RBP9.86□□□□□ -0.83
SPTLC3-206ENST00000485952 PLCG2P16885 1265 aa9.85□□□□□ -0.83
SPTLC3-206ENST00000485952 PDCD7Q8N8D1 485 aaKnown RBP9.85□□□□□ -0.83
SPTLC3-206ENST00000485952 DDX27Q96GQ7 796 aaKnown RBP9.85□□□□□ -0.83
SPTLC3-206ENST00000485952 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
SPTLC3-206ENST00000485952 MFSD10Q14728 455 aa9.84□□□□□ -0.83
SPTLC3-206ENST00000485952 DPY19L2Q6NUT2 758 aa9.84□□□□□ -0.83
SPTLC3-206ENST00000485952 SEC24BO95487 1268 aa9.83□□□□□ -0.84
SPTLC3-206ENST00000485952 ARHGEF1Q92888 912 aaKnown RBP9.83□□□□□ -0.84
SPTLC3-206ENST00000485952 MICALL2Q8IY33 904 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms