RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 POTEMA6NI47 508 aa13.43□□□□□ -0.26
SPTA1-207ENST00000485680 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
SPTA1-207ENST00000485680 C7P10643 843 aa13.43□□□□□ -0.26
SPTA1-207ENST00000485680 PROM2Q8N271 834 aa13.42□□□□□ -0.26
SPTA1-207ENST00000485680 SLC39A7Q92504 469 aa13.42□□□□□ -0.26
SPTA1-207ENST00000485680 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
SPTA1-207ENST00000485680 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
SPTA1-207ENST00000485680 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
SPTA1-207ENST00000485680 ATN1P54259 1190 aaPredicted RBP13.33□□□□□ -0.28
SPTA1-207ENST00000485680 KIF12Q96FN5 646 aa13.33□□□□□ -0.28
SPTA1-207ENST00000485680 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
SPTA1-207ENST00000485680 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
SPTA1-207ENST00000485680 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
SPTA1-207ENST00000485680 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
SPTA1-207ENST00000485680 LCE2DQ5TA82 110 aaPredicted RBP13.24□□□□□ -0.29
SPTA1-207ENST00000485680 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
SPTA1-207ENST00000485680 MAP3K13O43283 966 aa13.21□□□□□ -0.29
SPTA1-207ENST00000485680 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
SPTA1-207ENST00000485680 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
SPTA1-207ENST00000485680 MIER1Q8N108 512 aa13.19□□□□□ -0.3
SPTA1-207ENST00000485680 TIE1P35590 1138 aa13.18□□□□□ -0.3
SPTA1-207ENST00000485680 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
SPTA1-207ENST00000485680 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
SPTA1-207ENST00000485680 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
SPTA1-207ENST00000485680 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
SPTA1-207ENST00000485680 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
SPTA1-207ENST00000485680 SEC24BO95487 1268 aa13.04□□□□□ -0.32
SPTA1-207ENST00000485680 IER5LQ5T953 404 aa13.01□□□□□ -0.33
SPTA1-207ENST00000485680 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
SPTA1-207ENST00000485680 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
SPTA1-207ENST00000485680 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
SPTA1-207ENST00000485680 NUBP1P53384 320 aa13□□□□□ -0.33
SPTA1-207ENST00000485680 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
SPTA1-207ENST00000485680 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
SPTA1-207ENST00000485680 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
SPTA1-207ENST00000485680 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
SPTA1-207ENST00000485680 SLAIN1Q8ND83 568 aa12.87□□□□□ -0.35
SPTA1-207ENST00000485680 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
SPTA1-207ENST00000485680 ST18O60284 1047 aa12.84□□□□□ -0.35
SPTA1-207ENST00000485680 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
SPTA1-207ENST00000485680 PLCG2P16885 1265 aa12.82□□□□□ -0.36
SPTA1-207ENST00000485680 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
SPTA1-207ENST00000485680 DCAF8Q5TAQ9 597 aa12.73□□□□□ -0.37
SPTA1-207ENST00000485680 PYGBP11216 843 aa12.72□□□□□ -0.37
SPTA1-207ENST00000485680 FKBP8Q14318 412 aa12.71□□□□□ -0.37
SPTA1-207ENST00000485680 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
SPTA1-207ENST00000485680 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
SPTA1-207ENST00000485680 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
SPTA1-207ENST00000485680 SNPHO15079 494 aa12.63□□□□□ -0.39
SPTA1-207ENST00000485680 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
SPTA1-207ENST00000485680 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
SPTA1-207ENST00000485680 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
SPTA1-207ENST00000485680 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
SPTA1-207ENST00000485680 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
SPTA1-207ENST00000485680 ZNF467Q7Z7K2 595 aaPredicted RBP12.51□□□□□ -0.41
SPTA1-207ENST00000485680 GSE1Q14687 1217 aa12.5□□□□□ -0.41
SPTA1-207ENST00000485680 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
SPTA1-207ENST00000485680 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
SPTA1-207ENST00000485680 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
SPTA1-207ENST00000485680 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
SPTA1-207ENST00000485680 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
SPTA1-207ENST00000485680 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
SPTA1-207ENST00000485680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.42
SPTA1-207ENST00000485680 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
SPTA1-207ENST00000485680 PSEN1P49768 467 aa12.43□□□□□ -0.42
SPTA1-207ENST00000485680 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
SPTA1-207ENST00000485680 EMP3P54852 163 aa12.43□□□□□ -0.42
SPTA1-207ENST00000485680 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
SPTA1-207ENST00000485680 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
SPTA1-207ENST00000485680 KRTAP3-3Q9BYR6 98 aa12.39□□□□□ -0.43
SPTA1-207ENST00000485680 KRTAP3-2Q9BYR7 98 aa12.39□□□□□ -0.43
SPTA1-207ENST00000485680 HS3ST6Q96QI5 342 aa12.38□□□□□ -0.43
SPTA1-207ENST00000485680 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
SPTA1-207ENST00000485680 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
SPTA1-207ENST00000485680 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
SPTA1-207ENST00000485680 HOXB3P14651 431 aaPredicted RBP12.29□□□□□ -0.44
SPTA1-207ENST00000485680 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
SPTA1-207ENST00000485680 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
SPTA1-207ENST00000485680 G3V3G9 751 aa12.21□□□□□ -0.45
SPTA1-207ENST00000485680 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
SPTA1-207ENST00000485680 SPOCK2Q92563 424 aa12.21□□□□□ -0.45
SPTA1-207ENST00000485680 IFNLR1Q8IU57 520 aaPredicted RBP12.2□□□□□ -0.46
SPTA1-207ENST00000485680 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
SPTA1-207ENST00000485680 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
SPTA1-207ENST00000485680 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
SPTA1-207ENST00000485680 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
SPTA1-207ENST00000485680 ERBB3P21860 1342 aa12.13□□□□□ -0.47
SPTA1-207ENST00000485680 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
SPTA1-207ENST00000485680 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
SPTA1-207ENST00000485680 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
SPTA1-207ENST00000485680 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
SPTA1-207ENST00000485680 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
SPTA1-207ENST00000485680 MICALL2Q8IY33 904 aa12.03□□□□□ -0.48
SPTA1-207ENST00000485680 RNF166Q96A37 237 aaPredicted RBP12.03□□□□□ -0.48
SPTA1-207ENST00000485680 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
SPTA1-207ENST00000485680 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
SPTA1-207ENST00000485680 GPR153Q6NV75 609 aa11.99□□□□□ -0.49
SPTA1-207ENST00000485680 ZNF687Q8N1G0 1237 aa11.99□□□□□ -0.49
SPTA1-207ENST00000485680 SOX12O15370 315 aa11.97□□□□□ -0.49
SPTA1-207ENST00000485680 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms