RNA–Protein interactions for RNA: ENST00000484987.1

COL21A1-210, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-210ENST00000484987 C7P10643 843 aa13.8□□□□□ -0.2
COL21A1-210ENST00000484987 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
COL21A1-210ENST00000484987 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
COL21A1-210ENST00000484987 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.21
COL21A1-210ENST00000484987 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
COL21A1-210ENST00000484987 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
COL21A1-210ENST00000484987 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
COL21A1-210ENST00000484987 FKBP8Q14318 412 aa13.6□□□□□ -0.23
COL21A1-210ENST00000484987 MMRN1Q13201 1228 aa13.59□□□□□ -0.23
COL21A1-210ENST00000484987 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
COL21A1-210ENST00000484987 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
COL21A1-210ENST00000484987 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
COL21A1-210ENST00000484987 SPNS2Q8IVW8 549 aa13.49□□□□□ -0.25
COL21A1-210ENST00000484987 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-210ENST00000484987 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-210ENST00000484987 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-210ENST00000484987 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL21A1-210ENST00000484987 ST18O60284 1047 aa13.4□□□□□ -0.26
COL21A1-210ENST00000484987 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
COL21A1-210ENST00000484987 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
COL21A1-210ENST00000484987 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
COL21A1-210ENST00000484987 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
COL21A1-210ENST00000484987 SEC24BO95487 1268 aa13.23□□□□□ -0.29
COL21A1-210ENST00000484987 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
COL21A1-210ENST00000484987 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
COL21A1-210ENST00000484987 TRPC6Q9Y210 931 aa13.19□□□□□ -0.3
COL21A1-210ENST00000484987 TIE1P35590 1138 aa13.18□□□□□ -0.3
COL21A1-210ENST00000484987 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
COL21A1-210ENST00000484987 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
COL21A1-210ENST00000484987 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
COL21A1-210ENST00000484987 MAP3K13O43283 966 aa13.07□□□□□ -0.32
COL21A1-210ENST00000484987 IER5LQ5T953 404 aa13.07□□□□□ -0.32
COL21A1-210ENST00000484987 PROM2Q8N271 834 aa13.07□□□□□ -0.32
COL21A1-210ENST00000484987 SLC24A1O60721 1099 aa13.06□□□□□ -0.32
COL21A1-210ENST00000484987 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
COL21A1-210ENST00000484987 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
COL21A1-210ENST00000484987 RASEFQ8IZ41 740 aa13□□□□□ -0.33
COL21A1-210ENST00000484987 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
COL21A1-210ENST00000484987 SNPHO15079 494 aa12.98□□□□□ -0.33
COL21A1-210ENST00000484987 KRTAP3-3Q9BYR6 98 aa12.94□□□□□ -0.34
COL21A1-210ENST00000484987 KRTAP3-2Q9BYR7 98 aa12.94□□□□□ -0.34
COL21A1-210ENST00000484987 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
COL21A1-210ENST00000484987 MIER1Q8N108 512 aa12.93□□□□□ -0.34
COL21A1-210ENST00000484987 PLCG2P16885 1265 aa12.86□□□□□ -0.35
COL21A1-210ENST00000484987 EMP3P54852 163 aa12.85□□□□□ -0.35
COL21A1-210ENST00000484987 PCDHB13Q9Y5F0 798 aa12.85□□□□□ -0.35
COL21A1-210ENST00000484987 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
COL21A1-210ENST00000484987 VASPP50552 380 aaPredicted RBP12.81□□□□□ -0.36
COL21A1-210ENST00000484987 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
COL21A1-210ENST00000484987 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
COL21A1-210ENST00000484987 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
COL21A1-210ENST00000484987 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.37
COL21A1-210ENST00000484987 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
COL21A1-210ENST00000484987 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.77□□□□□ -0.37
COL21A1-210ENST00000484987 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
COL21A1-210ENST00000484987 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
COL21A1-210ENST00000484987 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
COL21A1-210ENST00000484987 NUBP1P53384 320 aa12.74□□□□□ -0.37
COL21A1-210ENST00000484987 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
COL21A1-210ENST00000484987 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
COL21A1-210ENST00000484987 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
COL21A1-210ENST00000484987 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
COL21A1-210ENST00000484987 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
COL21A1-210ENST00000484987 PYGBP11216 843 aa12.53□□□□□ -0.4
COL21A1-210ENST00000484987 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
COL21A1-210ENST00000484987 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
COL21A1-210ENST00000484987 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
COL21A1-210ENST00000484987 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
COL21A1-210ENST00000484987 PKD2Q13563 968 aa12.47□□□□□ -0.41
COL21A1-210ENST00000484987 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
COL21A1-210ENST00000484987 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
COL21A1-210ENST00000484987 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
COL21A1-210ENST00000484987 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
COL21A1-210ENST00000484987 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
COL21A1-210ENST00000484987 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
COL21A1-210ENST00000484987 ERBB3P21860 1342 aa12.34□□□□□ -0.43
COL21A1-210ENST00000484987 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
COL21A1-210ENST00000484987 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
COL21A1-210ENST00000484987 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
COL21A1-210ENST00000484987 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
COL21A1-210ENST00000484987 PTGER2P43116 358 aa12.29□□□□□ -0.44
COL21A1-210ENST00000484987 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
COL21A1-210ENST00000484987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL21A1-210ENST00000484987 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
COL21A1-210ENST00000484987 ZNF710Q8N1W2 664 aa12.24□□□□□ -0.45
COL21A1-210ENST00000484987 VARS2Q5ST30 1063 aaKnown RBP12.23□□□□□ -0.45
COL21A1-210ENST00000484987 PSEN1P49768 467 aa12.22□□□□□ -0.45
COL21A1-210ENST00000484987 GSE1Q14687 1217 aa12.22□□□□□ -0.45
COL21A1-210ENST00000484987 DPY19L2Q6NUT2 758 aa12.21□□□□□ -0.45
COL21A1-210ENST00000484987 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
COL21A1-210ENST00000484987 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
COL21A1-210ENST00000484987 PLA2G2EQ9NZK7 142 aa12.18□□□□□ -0.46
COL21A1-210ENST00000484987 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
COL21A1-210ENST00000484987 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
COL21A1-210ENST00000484987 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
COL21A1-210ENST00000484987 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
COL21A1-210ENST00000484987 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
COL21A1-210ENST00000484987 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
COL21A1-210ENST00000484987 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
COL21A1-210ENST00000484987 RGL2O15211 777 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms