RNA–Protein interactions for RNA: ENST00000484879.1

RB1-204, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-204ENST00000484879 SLC39A7Q92504 469 aa15.66■□□□□ 0.1
RB1-204ENST00000484879 ATMINO43313 823 aaPredicted RBP15.65■□□□□ 0.1
RB1-204ENST00000484879 METRNQ9UJH8 293 aa15.65■□□□□ 0.1
RB1-204ENST00000484879 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
RB1-204ENST00000484879 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
RB1-204ENST00000484879 MAMSTRQ6ZN01 415 aa15.57■□□□□ 0.08
RB1-204ENST00000484879 POTEMA6NI47 508 aa15.56■□□□□ 0.08
RB1-204ENST00000484879 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
RB1-204ENST00000484879 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
RB1-204ENST00000484879 POTEGQ6S5H5 508 aa15.5■□□□□ 0.07
RB1-204ENST00000484879 POTEJP0CG39 1038 aa15.48■□□□□ 0.07
RB1-204ENST00000484879 ATN1P54259 1190 aaPredicted RBP15.48■□□□□ 0.07
RB1-204ENST00000484879 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
RB1-204ENST00000484879 MIER1Q8N108 512 aa15.44■□□□□ 0.06
RB1-204ENST00000484879 SCUBE2Q9NQ36 999 aa15.42■□□□□ 0.06
RB1-204ENST00000484879 BMP2KQ9NSY1 1161 aaPredicted RBP15.41■□□□□ 0.06
RB1-204ENST00000484879 TIE1P35590 1138 aa15.4■□□□□ 0.06
RB1-204ENST00000484879 MAP3K13O43283 966 aa15.38■□□□□ 0.05
RB1-204ENST00000484879 RASEFQ8IZ41 740 aa15.36■□□□□ 0.05
RB1-204ENST00000484879 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
RB1-204ENST00000484879 POTEFA5A3E0 1075 aa15.31■□□□□ 0.04
RB1-204ENST00000484879 SGIP1Q9BQI5 828 aa15.3■□□□□ 0.04
RB1-204ENST00000484879 TTLL13PA6NNM8 815 aa15.27■□□□□ 0.04
RB1-204ENST00000484879 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
RB1-204ENST00000484879 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.04
RB1-204ENST00000484879 FAM163AQ96GL9 167 aaPredicted RBP15.26■□□□□ 0.03
RB1-204ENST00000484879 LCE2DQ5TA82 110 aaPredicted RBP15.25■□□□□ 0.03
RB1-204ENST00000484879 SEC24BO95487 1268 aa15.24■□□□□ 0.03
RB1-204ENST00000484879 IER5LQ5T953 404 aa15.22■□□□□ 0.03
RB1-204ENST00000484879 PCDHB13Q9Y5F0 798 aa15.2■□□□□ 0.02
RB1-204ENST00000484879 COLQQ9Y215 455 aaPredicted RBP15.19■□□□□ 0.02
RB1-204ENST00000484879 NUBP1P53384 320 aa15.16■□□□□ 0.02
RB1-204ENST00000484879 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
RB1-204ENST00000484879 FAM212AQ96EL1 285 aa15.1■□□□□ 0.01
RB1-204ENST00000484879 IFNL1Q8IU54 200 aa15.08■□□□□ 0
RB1-204ENST00000484879 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
RB1-204ENST00000484879 PLCG2P16885 1265 aa14.99□□□□□ -0.01
RB1-204ENST00000484879 SLAIN1Q8ND83 568 aa14.98□□□□□ -0.01
RB1-204ENST00000484879 CDAN1Q8IWY9 1227 aa14.95□□□□□ -0.02
RB1-204ENST00000484879 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
RB1-204ENST00000484879 FKBP8Q14318 412 aa14.92□□□□□ -0.02
RB1-204ENST00000484879 ST18O60284 1047 aa14.89□□□□□ -0.03
RB1-204ENST00000484879 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
RB1-204ENST00000484879 OCEL1Q9H607 264 aa14.89□□□□□ -0.03
RB1-204ENST00000484879 PYGBP11216 843 aa14.83□□□□□ -0.04
RB1-204ENST00000484879 FBXO3Q9UK99 471 aa14.83□□□□□ -0.04
RB1-204ENST00000484879 TMEM121BQ9BXQ6 578 aaPredicted RBP14.81□□□□□ -0.04
RB1-204ENST00000484879 SNPHO15079 494 aa14.8□□□□□ -0.04
RB1-204ENST00000484879 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.77□□□□□ -0.05
RB1-204ENST00000484879 PCDHB8Q9UN66 801 aa14.77□□□□□ -0.05
RB1-204ENST00000484879 GSE1Q14687 1217 aa14.71□□□□□ -0.05
RB1-204ENST00000484879 ZNF467Q7Z7K2 595 aaPredicted RBP14.71□□□□□ -0.05
RB1-204ENST00000484879 CHRM1P11229 460 aaPredicted RBP14.65□□□□□ -0.06
RB1-204ENST00000484879 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
RB1-204ENST00000484879 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
RB1-204ENST00000484879 MKRN3Q13064 507 aaKnown RBP14.64□□□□□ -0.07
RB1-204ENST00000484879 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
RB1-204ENST00000484879 KLHL34Q8N239 644 aa14.63□□□□□ -0.07
RB1-204ENST00000484879 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
RB1-204ENST00000484879 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
RB1-204ENST00000484879 SPNS2Q8IVW8 549 aa14.59□□□□□ -0.07
RB1-204ENST00000484879 MMRN1Q13201 1228 aa14.58□□□□□ -0.08
RB1-204ENST00000484879 MARVELD3Q96A59 401 aa14.57□□□□□ -0.08
RB1-204ENST00000484879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.55□□□□□ -0.08
RB1-204ENST00000484879 PSEN1P49768 467 aa14.54□□□□□ -0.08
RB1-204ENST00000484879 EMP3P54852 163 aa14.49□□□□□ -0.09
RB1-204ENST00000484879 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
RB1-204ENST00000484879 PDAP1Q13442 181 aaKnown RBP14.47□□□□□ -0.09
RB1-204ENST00000484879 HS3ST6Q96QI5 342 aa14.39□□□□□ -0.11
RB1-204ENST00000484879 G3V3G9 751 aa14.37□□□□□ -0.11
RB1-204ENST00000484879 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
RB1-204ENST00000484879 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
RB1-204ENST00000484879 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
RB1-204ENST00000484879 BOLA1Q9Y3E2 137 aa14.35□□□□□ -0.11
RB1-204ENST00000484879 DPY19L2Q6NUT2 758 aa14.34□□□□□ -0.11
RB1-204ENST00000484879 KRTAP3-3Q9BYR6 98 aa14.34□□□□□ -0.11
RB1-204ENST00000484879 KRTAP3-2Q9BYR7 98 aa14.34□□□□□ -0.11
RB1-204ENST00000484879 POTEB3A0JP26 581 aa14.33□□□□□ -0.12
RB1-204ENST00000484879 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
RB1-204ENST00000484879 CIZ1Q9ULV3 898 aaPredicted RBP14.31□□□□□ -0.12
RB1-204ENST00000484879 HOXB3P14651 431 aaPredicted RBP14.28□□□□□ -0.12
RB1-204ENST00000484879 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
RB1-204ENST00000484879 HOXB1P14653 301 aaPredicted RBP14.24□□□□□ -0.13
RB1-204ENST00000484879 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
RB1-204ENST00000484879 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
RB1-204ENST00000484879 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
RB1-204ENST00000484879 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
RB1-204ENST00000484879 ERBB3P21860 1342 aa14.15□□□□□ -0.15
RB1-204ENST00000484879 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
RB1-204ENST00000484879 ZSWIM6Q9HCJ5 1215 aa14.09□□□□□ -0.15
RB1-204ENST00000484879 SOX12O15370 315 aa14.05□□□□□ -0.16
RB1-204ENST00000484879 MICALL2Q8IY33 904 aa14.05□□□□□ -0.16
RB1-204ENST00000484879 VARS2Q5ST30 1063 aaKnown RBP14.03□□□□□ -0.16
RB1-204ENST00000484879 TMEM92Q6UXU6 159 aa14□□□□□ -0.17
RB1-204ENST00000484879 RNF166Q96A37 237 aaPredicted RBP14□□□□□ -0.17
RB1-204ENST00000484879 ZNF687Q8N1G0 1237 aa13.99□□□□□ -0.17
RB1-204ENST00000484879 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
RB1-204ENST00000484879 GPR153Q6NV75 609 aa13.96□□□□□ -0.17
RB1-204ENST00000484879 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
RB1-204ENST00000484879 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms