RNA–Protein interactions for RNA: ENST00000484645.1

RAPGEF4-212, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 842 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-212ENST00000484645 DCAF8Q5TAQ9 597 aa14.7□□□□□ -0.06
RAPGEF4-212ENST00000484645 CLCN6P51797 869 aa14.67□□□□□ -0.06
RAPGEF4-212ENST00000484645 GSE1Q14687 1217 aa14.67□□□□□ -0.06
RAPGEF4-212ENST00000484645 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
RAPGEF4-212ENST00000484645 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
RAPGEF4-212ENST00000484645 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF4-212ENST00000484645 GABBR2O75899 941 aa14.6□□□□□ -0.07
RAPGEF4-212ENST00000484645 KIF12Q96FN5 646 aa14.54□□□□□ -0.08
RAPGEF4-212ENST00000484645 PYGBP11216 843 aa14.51□□□□□ -0.09
RAPGEF4-212ENST00000484645 MAP3K13O43283 966 aa14.49□□□□□ -0.09
RAPGEF4-212ENST00000484645 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
RAPGEF4-212ENST00000484645 GALR2O43603 387 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF4-212ENST00000484645 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
RAPGEF4-212ENST00000484645 SGIP1Q9BQI5 828 aa14.47□□□□□ -0.09
RAPGEF4-212ENST00000484645 PCDHB13Q9Y5F0 798 aa14.46□□□□□ -0.09
RAPGEF4-212ENST00000484645 CHRM1P11229 460 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF4-212ENST00000484645 DCBLD2Q96PD2 775 aa14.39□□□□□ -0.11
RAPGEF4-212ENST00000484645 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
RAPGEF4-212ENST00000484645 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF4-212ENST00000484645 ECM2O94769 699 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF4-212ENST00000484645 PKD2Q13563 968 aa14.33□□□□□ -0.12
RAPGEF4-212ENST00000484645 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
RAPGEF4-212ENST00000484645 TIE1P35590 1138 aa14.29□□□□□ -0.12
RAPGEF4-212ENST00000484645 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
RAPGEF4-212ENST00000484645 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
RAPGEF4-212ENST00000484645 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF4-212ENST00000484645 BMP2KQ9NSY1 1161 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF4-212ENST00000484645 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
RAPGEF4-212ENST00000484645 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF4-212ENST00000484645 PDAP1Q13442 181 aaKnown RBP14.2□□□□□ -0.14
RAPGEF4-212ENST00000484645 TMEM106CQ9BVX2 250 aa14.2□□□□□ -0.14
RAPGEF4-212ENST00000484645 TTLL13PA6NNM8 815 aa14.19□□□□□ -0.14
RAPGEF4-212ENST00000484645 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF4-212ENST00000484645 RNF25Q96BH1 459 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF4-212ENST00000484645 PSEN1P49768 467 aa14.18□□□□□ -0.14
RAPGEF4-212ENST00000484645 TAOK2Q9UL54 1235 aa14.18□□□□□ -0.14
RAPGEF4-212ENST00000484645 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
RAPGEF4-212ENST00000484645 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF4-212ENST00000484645 RGL2O15211 777 aa14.14□□□□□ -0.15
RAPGEF4-212ENST00000484645 TRIM35Q9UPQ4 493 aa14.12□□□□□ -0.15
RAPGEF4-212ENST00000484645 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
RAPGEF4-212ENST00000484645 SLC39A7Q92504 469 aa14.09□□□□□ -0.15
RAPGEF4-212ENST00000484645 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
RAPGEF4-212ENST00000484645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF4-212ENST00000484645 C7P10643 843 aa14.06□□□□□ -0.16
RAPGEF4-212ENST00000484645 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF4-212ENST00000484645 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
RAPGEF4-212ENST00000484645 IER5LQ5T953 404 aa14.03□□□□□ -0.16
RAPGEF4-212ENST00000484645 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
RAPGEF4-212ENST00000484645 CABP2Q9NPB3 220 aa14.01□□□□□ -0.17
RAPGEF4-212ENST00000484645 MKRN3Q13064 507 aaKnown RBP14□□□□□ -0.17
RAPGEF4-212ENST00000484645 STK25O00506 426 aa13.98□□□□□ -0.17
RAPGEF4-212ENST00000484645 SEC24BO95487 1268 aa13.97□□□□□ -0.17
RAPGEF4-212ENST00000484645 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF4-212ENST00000484645 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
RAPGEF4-212ENST00000484645 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
RAPGEF4-212ENST00000484645 PLCG2P16885 1265 aa13.91□□□□□ -0.18
RAPGEF4-212ENST00000484645 EFCAB3Q8N7B9 438 aa13.91□□□□□ -0.18
RAPGEF4-212ENST00000484645 IRX5P78411 483 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF4-212ENST00000484645 OCEL1Q9H607 264 aa13.89□□□□□ -0.19
RAPGEF4-212ENST00000484645 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
RAPGEF4-212ENST00000484645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAPGEF4-212ENST00000484645 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF4-212ENST00000484645 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
RAPGEF4-212ENST00000484645 LHX8Q68G74 356 aa13.87□□□□□ -0.19
RAPGEF4-212ENST00000484645 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
RAPGEF4-212ENST00000484645 SOX12O15370 315 aa13.85□□□□□ -0.19
RAPGEF4-212ENST00000484645 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF4-212ENST00000484645 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
RAPGEF4-212ENST00000484645 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
RAPGEF4-212ENST00000484645 NLRP6P59044 892 aa13.76□□□□□ -0.21
RAPGEF4-212ENST00000484645 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
RAPGEF4-212ENST00000484645 MAMSTRQ6ZN01 415 aa13.73□□□□□ -0.21
RAPGEF4-212ENST00000484645 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
RAPGEF4-212ENST00000484645 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF4-212ENST00000484645 MFRPQ9BY79 579 aa13.72□□□□□ -0.21
RAPGEF4-212ENST00000484645 G3V3G9 751 aa13.69□□□□□ -0.22
RAPGEF4-212ENST00000484645 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
RAPGEF4-212ENST00000484645 DPY19L2Q6NUT2 758 aa13.69□□□□□ -0.22
RAPGEF4-212ENST00000484645 FBXO22Q8NEZ5 403 aa13.69□□□□□ -0.22
RAPGEF4-212ENST00000484645 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
RAPGEF4-212ENST00000484645 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
RAPGEF4-212ENST00000484645 RYDENQ9NUL5 291 aaKnown RBP13.65□□□□□ -0.22
RAPGEF4-212ENST00000484645 BOLA1Q9Y3E2 137 aa13.64□□□□□ -0.23
RAPGEF4-212ENST00000484645 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF4-212ENST00000484645 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
RAPGEF4-212ENST00000484645 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
RAPGEF4-212ENST00000484645 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF4-212ENST00000484645 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
RAPGEF4-212ENST00000484645 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
RAPGEF4-212ENST00000484645 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF4-212ENST00000484645 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF4-212ENST00000484645 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF4-212ENST00000484645 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
RAPGEF4-212ENST00000484645 PPP1R37O75864 691 aa13.5□□□□□ -0.25
RAPGEF4-212ENST00000484645 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
RAPGEF4-212ENST00000484645 PAXIP1Q6ZW49 1069 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF4-212ENST00000484645 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
RAPGEF4-212ENST00000484645 TMEM92Q6UXU6 159 aa13.35□□□□□ -0.27
RAPGEF4-212ENST00000484645 SNPHO15079 494 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms