RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
CCDC66-219ENST00000484441 CLCN6P51797 869 aa14.95□□□□□ -0.02
CCDC66-219ENST00000484441 GSE1Q14687 1217 aa14.95□□□□□ -0.02
CCDC66-219ENST00000484441 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
CCDC66-219ENST00000484441 PHF12Q96QT6 1004 aa14.93□□□□□ -0.02
CCDC66-219ENST00000484441 GABBR2O75899 941 aa14.88□□□□□ -0.03
CCDC66-219ENST00000484441 KIF12Q96FN5 646 aa14.87□□□□□ -0.03
CCDC66-219ENST00000484441 CIZ1Q9ULV3 898 aaPredicted RBP14.83□□□□□ -0.04
CCDC66-219ENST00000484441 CHRM1P11229 460 aaPredicted RBP14.82□□□□□ -0.04
CCDC66-219ENST00000484441 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
CCDC66-219ENST00000484441 MAP3K13O43283 966 aa14.8□□□□□ -0.04
CCDC66-219ENST00000484441 PYGBP11216 843 aa14.79□□□□□ -0.04
CCDC66-219ENST00000484441 TRIM41Q8WV44 630 aa14.79□□□□□ -0.04
CCDC66-219ENST00000484441 GALR2O43603 387 aaPredicted RBP14.78□□□□□ -0.04
CCDC66-219ENST00000484441 MS4A3Q96HJ5 214 aa14.78□□□□□ -0.04
CCDC66-219ENST00000484441 PKD2Q13563 968 aa14.74□□□□□ -0.05
CCDC66-219ENST00000484441 PCDHB13Q9Y5F0 798 aa14.72□□□□□ -0.05
CCDC66-219ENST00000484441 IFNL1Q8IU54 200 aa14.69□□□□□ -0.06
CCDC66-219ENST00000484441 ZNF467Q7Z7K2 595 aaPredicted RBP14.64□□□□□ -0.07
CCDC66-219ENST00000484441 TRPC6Q9Y210 931 aa14.63□□□□□ -0.07
CCDC66-219ENST00000484441 RNF25Q96BH1 459 aaPredicted RBP14.62□□□□□ -0.07
CCDC66-219ENST00000484441 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
CCDC66-219ENST00000484441 ECM2O94769 699 aaPredicted RBP14.6□□□□□ -0.07
CCDC66-219ENST00000484441 TIE1P35590 1138 aa14.6□□□□□ -0.07
CCDC66-219ENST00000484441 PCDHB8Q9UN66 801 aa14.6□□□□□ -0.07
CCDC66-219ENST00000484441 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
CCDC66-219ENST00000484441 DCBLD2Q96PD2 775 aa14.57□□□□□ -0.08
CCDC66-219ENST00000484441 BMP2KQ9NSY1 1161 aaPredicted RBP14.56□□□□□ -0.08
CCDC66-219ENST00000484441 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
CCDC66-219ENST00000484441 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
CCDC66-219ENST00000484441 RIOK3O14730 519 aaKnown RBP14.52□□□□□ -0.09
CCDC66-219ENST00000484441 TTLL13PA6NNM8 815 aa14.51□□□□□ -0.09
CCDC66-219ENST00000484441 RGL2O15211 777 aa14.5□□□□□ -0.09
CCDC66-219ENST00000484441 PDAP1Q13442 181 aaKnown RBP14.49□□□□□ -0.09
CCDC66-219ENST00000484441 RTN4Q9NQC3 1192 aaKnown RBP14.48□□□□□ -0.09
CCDC66-219ENST00000484441 ATN1P54259 1190 aaPredicted RBP14.47□□□□□ -0.09
CCDC66-219ENST00000484441 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.09
CCDC66-219ENST00000484441 PSEN1P49768 467 aa14.46□□□□□ -0.09
CCDC66-219ENST00000484441 TMEM106CQ9BVX2 250 aa14.46□□□□□ -0.09
CCDC66-219ENST00000484441 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
CCDC66-219ENST00000484441 TAOK2Q9UL54 1235 aa14.4□□□□□ -0.1
CCDC66-219ENST00000484441 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
CCDC66-219ENST00000484441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
CCDC66-219ENST00000484441 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
CCDC66-219ENST00000484441 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
CCDC66-219ENST00000484441 IER5LQ5T953 404 aa14.33□□□□□ -0.12
CCDC66-219ENST00000484441 C7P10643 843 aa14.32□□□□□ -0.12
CCDC66-219ENST00000484441 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
CCDC66-219ENST00000484441 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.13
CCDC66-219ENST00000484441 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
CCDC66-219ENST00000484441 POTEFA5A3E0 1075 aa14.25□□□□□ -0.13
CCDC66-219ENST00000484441 STK25O00506 426 aa14.25□□□□□ -0.13
CCDC66-219ENST00000484441 HS6ST3Q8IZP7 471 aa14.24□□□□□ -0.13
CCDC66-219ENST00000484441 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
CCDC66-219ENST00000484441 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
CCDC66-219ENST00000484441 GOLGA2Q08379 1002 aa14.22□□□□□ -0.13
CCDC66-219ENST00000484441 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
CCDC66-219ENST00000484441 STK24Q9Y6E0 443 aa14.21□□□□□ -0.13
CCDC66-219ENST00000484441 EFCAB3Q8N7B9 438 aa14.19□□□□□ -0.14
CCDC66-219ENST00000484441 DNAJC5Q9H3Z4 198 aa14.19□□□□□ -0.14
CCDC66-219ENST00000484441 COLQQ9Y215 455 aaPredicted RBP14.19□□□□□ -0.14
CCDC66-219ENST00000484441 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
CCDC66-219ENST00000484441 PDCD7Q8N8D1 485 aaKnown RBP14.15□□□□□ -0.14
CCDC66-219ENST00000484441 OCEL1Q9H607 264 aa14.15□□□□□ -0.14
CCDC66-219ENST00000484441 SOX12O15370 315 aa14.14□□□□□ -0.15
CCDC66-219ENST00000484441 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
CCDC66-219ENST00000484441 SEC24BO95487 1268 aa14.13□□□□□ -0.15
CCDC66-219ENST00000484441 PLCG2P16885 1265 aa14.12□□□□□ -0.15
CCDC66-219ENST00000484441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.11□□□□□ -0.152e-7■■■■■ 28
CCDC66-219ENST00000484441 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
CCDC66-219ENST00000484441 LHX8Q68G74 356 aa14.09□□□□□ -0.15
CCDC66-219ENST00000484441 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
CCDC66-219ENST00000484441 MFRPQ9BY79 579 aa14.07□□□□□ -0.16
CCDC66-219ENST00000484441 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
CCDC66-219ENST00000484441 PHF8Q9UPP1 1060 aa14.06□□□□□ -0.16
CCDC66-219ENST00000484441 MS4A4AQ96JQ5 239 aa14.05□□□□□ -0.16
CCDC66-219ENST00000484441 NLRP6P59044 892 aa14.03□□□□□ -0.16
CCDC66-219ENST00000484441 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
CCDC66-219ENST00000484441 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
CCDC66-219ENST00000484441 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
CCDC66-219ENST00000484441 MAMSTRQ6ZN01 415 aa13.93□□□□□ -0.18
CCDC66-219ENST00000484441 BBXQ8WY36 941 aaPredicted RBP13.93□□□□□ -0.18
CCDC66-219ENST00000484441 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
CCDC66-219ENST00000484441 TMEM121BQ9BXQ6 578 aaPredicted RBP13.92□□□□□ -0.18
CCDC66-219ENST00000484441 RYDENQ9NUL5 291 aaKnown RBP13.9□□□□□ -0.18
CCDC66-219ENST00000484441 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
CCDC66-219ENST00000484441 GTPBP6O43824 516 aaPredicted RBP13.88□□□□□ -0.19
CCDC66-219ENST00000484441 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
CCDC66-219ENST00000484441 MICALL2Q8IY33 904 aa13.86□□□□□ -0.19
CCDC66-219ENST00000484441 PPP1R37O75864 691 aa13.84□□□□□ -0.19
CCDC66-219ENST00000484441 G3V3G9 751 aa13.8□□□□□ -0.2
CCDC66-219ENST00000484441 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
CCDC66-219ENST00000484441 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.79□□□□□ -0.2
CCDC66-219ENST00000484441 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
CCDC66-219ENST00000484441 SLAIN1Q8ND83 568 aa13.72□□□□□ -0.21
CCDC66-219ENST00000484441 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
CCDC66-219ENST00000484441 SPRYD3Q8NCJ5 442 aa13.7□□□□□ -0.22
CCDC66-219ENST00000484441 KIF3CO14782 793 aa13.66□□□□□ -0.22
CCDC66-219ENST00000484441 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
CCDC66-219ENST00000484441 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms