RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 SPOCK2Q92563 424 aa14.59□□□□□ -0.07
RIF1-210ENST00000484077 TSPYL2Q9H2G4 693 aaPredicted RBP14.59□□□□□ -0.07
RIF1-210ENST00000484077 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
RIF1-210ENST00000484077 GABBR2O75899 941 aa14.55□□□□□ -0.08
RIF1-210ENST00000484077 GSE1Q14687 1217 aa14.53□□□□□ -0.08
RIF1-210ENST00000484077 DCAF8Q5TAQ9 597 aa14.48□□□□□ -0.09
RIF1-210ENST00000484077 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
RIF1-210ENST00000484077 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
RIF1-210ENST00000484077 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
RIF1-210ENST00000484077 GALR2O43603 387 aaPredicted RBP14.37□□□□□ -0.11
RIF1-210ENST00000484077 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
RIF1-210ENST00000484077 CHRM1P11229 460 aaPredicted RBP14.36□□□□□ -0.11
RIF1-210ENST00000484077 MAP3K13O43283 966 aa14.34□□□□□ -0.11
RIF1-210ENST00000484077 MS4A3Q96HJ5 214 aa14.34□□□□□ -0.11
RIF1-210ENST00000484077 CIZ1Q9ULV3 898 aaPredicted RBP14.34□□□□□ -0.11
RIF1-210ENST00000484077 DCBLD2Q96PD2 775 aa14.31□□□□□ -0.12
RIF1-210ENST00000484077 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
RIF1-210ENST00000484077 PYGBP11216 843 aa14.29□□□□□ -0.12
RIF1-210ENST00000484077 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
RIF1-210ENST00000484077 TIE1P35590 1138 aa14.23□□□□□ -0.13
RIF1-210ENST00000484077 IFNL1Q8IU54 200 aa14.21□□□□□ -0.13
RIF1-210ENST00000484077 POTEIP0CG38 1075 aa14.2□□□□□ -0.14
RIF1-210ENST00000484077 ASTLQ6HA08 431 aaPredicted RBP14.19□□□□□ -0.14
RIF1-210ENST00000484077 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
RIF1-210ENST00000484077 BMP2KQ9NSY1 1161 aaPredicted RBP14.13□□□□□ -0.15
RIF1-210ENST00000484077 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
RIF1-210ENST00000484077 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
RIF1-210ENST00000484077 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
RIF1-210ENST00000484077 PKD2Q13563 968 aa14.07□□□□□ -0.16
RIF1-210ENST00000484077 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
RIF1-210ENST00000484077 PDAP1Q13442 181 aaKnown RBP14.06□□□□□ -0.16
RIF1-210ENST00000484077 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
RIF1-210ENST00000484077 SLC39A7Q92504 469 aa14.05□□□□□ -0.16
RIF1-210ENST00000484077 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
RIF1-210ENST00000484077 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
RIF1-210ENST00000484077 C7P10643 843 aa14.03□□□□□ -0.16
RIF1-210ENST00000484077 RIOK3O14730 519 aaKnown RBP14.02□□□□□ -0.17
RIF1-210ENST00000484077 PSEN1P49768 467 aa14.01□□□□□ -0.17
RIF1-210ENST00000484077 IER5LQ5T953 404 aa14□□□□□ -0.17
RIF1-210ENST00000484077 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
RIF1-210ENST00000484077 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
RIF1-210ENST00000484077 VGFO15240 615 aaPredicted RBP13.98□□□□□ -0.17
RIF1-210ENST00000484077 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
RIF1-210ENST00000484077 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
RIF1-210ENST00000484077 GOLGA2Q08379 1002 aa13.9□□□□□ -0.18
RIF1-210ENST00000484077 RGL2O15211 777 aa13.87□□□□□ -0.19
RIF1-210ENST00000484077 LHX8Q68G74 356 aa13.87□□□□□ -0.19
RIF1-210ENST00000484077 MKRN3Q13064 507 aaKnown RBP13.86□□□□□ -0.19
RIF1-210ENST00000484077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.84□□□□□ -0.19
RIF1-210ENST00000484077 SEC24BO95487 1268 aa13.84□□□□□ -0.19
RIF1-210ENST00000484077 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
RIF1-210ENST00000484077 ZFP91Q96JP5 570 aaPredicted RBP13.84□□□□□ -0.19
RIF1-210ENST00000484077 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
RIF1-210ENST00000484077 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
RIF1-210ENST00000484077 PLCG2P16885 1265 aa13.8□□□□□ -0.2
RIF1-210ENST00000484077 OCEL1Q9H607 264 aa13.8□□□□□ -0.2
RIF1-210ENST00000484077 POTEFA5A3E0 1075 aa13.78□□□□□ -0.2
RIF1-210ENST00000484077 COLQQ9Y215 455 aaPredicted RBP13.76□□□□□ -0.21
RIF1-210ENST00000484077 ILDR1Q86SU0 546 aaPredicted RBP13.75□□□□□ -0.21
RIF1-210ENST00000484077 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
RIF1-210ENST00000484077 STK25O00506 426 aa13.74□□□□□ -0.21
RIF1-210ENST00000484077 SOX12O15370 315 aa13.73□□□□□ -0.21
RIF1-210ENST00000484077 MAMSTRQ6ZN01 415 aa13.73□□□□□ -0.21
RIF1-210ENST00000484077 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
RIF1-210ENST00000484077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
RIF1-210ENST00000484077 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
RIF1-210ENST00000484077 EFCAB3Q8N7B9 438 aa13.71□□□□□ -0.21
RIF1-210ENST00000484077 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
RIF1-210ENST00000484077 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
RIF1-210ENST00000484077 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
RIF1-210ENST00000484077 SCUBE2Q9NQ36 999 aa13.65□□□□□ -0.22
RIF1-210ENST00000484077 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
RIF1-210ENST00000484077 POTEJP0CG39 1038 aa13.62□□□□□ -0.23
RIF1-210ENST00000484077 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
RIF1-210ENST00000484077 NLRP6P59044 892 aa13.61□□□□□ -0.23
RIF1-210ENST00000484077 OTUD5Q96G74 571 aa13.6□□□□□ -0.23
RIF1-210ENST00000484077 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
RIF1-210ENST00000484077 PHF8Q9UPP1 1060 aa13.55□□□□□ -0.24
RIF1-210ENST00000484077 G3V3G9 751 aa13.54□□□□□ -0.24
RIF1-210ENST00000484077 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
RIF1-210ENST00000484077 MFRPQ9BY79 579 aa13.53□□□□□ -0.24
RIF1-210ENST00000484077 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
RIF1-210ENST00000484077 BOLA1Q9Y3E2 137 aa13.52□□□□□ -0.25
RIF1-210ENST00000484077 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
RIF1-210ENST00000484077 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
RIF1-210ENST00000484077 RYDENQ9NUL5 291 aaKnown RBP13.5□□□□□ -0.25
RIF1-210ENST00000484077 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
RIF1-210ENST00000484077 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
RIF1-210ENST00000484077 TMEM121BQ9BXQ6 578 aaPredicted RBP13.48□□□□□ -0.25
RIF1-210ENST00000484077 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
RIF1-210ENST00000484077 SLAIN1Q8ND83 568 aa13.41□□□□□ -0.26
RIF1-210ENST00000484077 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
RIF1-210ENST00000484077 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
RIF1-210ENST00000484077 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
RIF1-210ENST00000484077 SNPHO15079 494 aa13.31□□□□□ -0.28
RIF1-210ENST00000484077 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
RIF1-210ENST00000484077 PPP1R37O75864 691 aa13.27□□□□□ -0.29
RIF1-210ENST00000484077 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
RIF1-210ENST00000484077 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
RIF1-210ENST00000484077 KIF3CO14782 793 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms