RNA–Protein interactions for RNA: ENST00000483866.1

KDM3A-211, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 449 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-211ENST00000483866 CHGAP10645 457 aaKnown RBP8.35□□□□□ -1.07
KDM3A-211ENST00000483866 SPRYD3Q8NCJ5 442 aa8.35□□□□□ -1.07
KDM3A-211ENST00000483866 KDM2AQ9Y2K7 1162 aa8.34□□□□□ -1.07
KDM3A-211ENST00000483866 TAOK2Q9UL54 1235 aa8.32□□□□□ -1.08
KDM3A-211ENST00000483866 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
KDM3A-211ENST00000483866 EVX2Q03828 476 aa8.31□□□□□ -1.08
KDM3A-211ENST00000483866 TRIM41Q8WV44 630 aa8.31□□□□□ -1.08
KDM3A-211ENST00000483866 PIP4P2Q8N4L2 257 aa8.3□□□□□ -1.08
KDM3A-211ENST00000483866 NACADO15069 1562 aa8.3□□□□□ -1.08
KDM3A-211ENST00000483866 TSHZ2Q9NRE2 1034 aa8.29□□□□□ -1.08
KDM3A-211ENST00000483866 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
KDM3A-211ENST00000483866 GSE1Q14687 1217 aa8.26□□□□□ -1.09
KDM3A-211ENST00000483866 HAX1O00165 279 aa8.25□□□□□ -1.09
KDM3A-211ENST00000483866 RB1CC1Q8TDY2 1594 aa8.23□□□□□ -1.09
KDM3A-211ENST00000483866 TPRNQ4KMQ1 711 aa8.23□□□□□ -1.09
KDM3A-211ENST00000483866 HS6ST3Q8IZP7 471 aa8.23□□□□□ -1.09
KDM3A-211ENST00000483866 DCAF8Q5TAQ9 597 aa8.22□□□□□ -1.09
KDM3A-211ENST00000483866 SPDYE1Q8NFV5 336 aaPredicted RBP8.21□□□□□ -1.1
KDM3A-211ENST00000483866 RNF25Q96BH1 459 aaPredicted RBP8.2□□□□□ -1.1
KDM3A-211ENST00000483866 FXR2P51116 673 aaKnown RBP eCLIP8.19□□□□□ -1.1
KDM3A-211ENST00000483866 NUBP1P53384 320 aa8.19□□□□□ -1.1
KDM3A-211ENST00000483866 CLEC11AQ9Y240 323 aa8.19□□□□□ -1.1
KDM3A-211ENST00000483866 RIOK3O14730 519 aaKnown RBP8.16□□□□□ -1.1
KDM3A-211ENST00000483866 FAM212AQ96EL1 285 aa8.16□□□□□ -1.1
KDM3A-211ENST00000483866 PRR29P0C7W0 189 aa8.15□□□□□ -1.1
KDM3A-211ENST00000483866 NBR1Q14596 966 aa8.15□□□□□ -1.1
KDM3A-211ENST00000483866 DNAJC5Q9H3Z4 198 aa8.13□□□□□ -1.11
KDM3A-211ENST00000483866 STK25O00506 426 aa8.12□□□□□ -1.11
KDM3A-211ENST00000483866 PLSCR2Q9NRY7 297 aa8.12□□□□□ -1.11
KDM3A-211ENST00000483866 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
KDM3A-211ENST00000483866 VGFO15240 615 aaPredicted RBP8.11□□□□□ -1.11
KDM3A-211ENST00000483866 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
KDM3A-211ENST00000483866 GTPBP6O43824 516 aaPredicted RBP8.07□□□□□ -1.12
KDM3A-211ENST00000483866 PRKAR2AP13861 404 aaKnown RBP8.07□□□□□ -1.12
KDM3A-211ENST00000483866 MNX1P50219 401 aaPredicted RBP8.07□□□□□ -1.12
KDM3A-211ENST00000483866 LHX8Q68G74 356 aa8.07□□□□□ -1.12
KDM3A-211ENST00000483866 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
KDM3A-211ENST00000483866 STK24Q9Y6E0 443 aa8.06□□□□□ -1.12
KDM3A-211ENST00000483866 UNC13AQ9UPW8 1703 aa8.04□□□□□ -1.12
KDM3A-211ENST00000483866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.04□□□□□ -1.12
KDM3A-211ENST00000483866 PYGBP11216 843 aa8.04□□□□□ -1.12
KDM3A-211ENST00000483866 CHRM1P11229 460 aaPredicted RBP8.04□□□□□ -1.12
KDM3A-211ENST00000483866 ZFP91Q96JP5 570 aaPredicted RBP8.04□□□□□ -1.12
KDM3A-211ENST00000483866 BCL11BQ9C0K0 894 aaPredicted RBP8.04□□□□□ -1.12
KDM3A-211ENST00000483866 SCRIBQ14160 1630 aa8.01□□□□□ -1.13
KDM3A-211ENST00000483866 SGIP1Q9BQI5 828 aa8.01□□□□□ -1.13
KDM3A-211ENST00000483866 RYDENQ9NUL5 291 aaKnown RBP8.01□□□□□ -1.13
KDM3A-211ENST00000483866 CHADLQ6NUI6 762 aa7.98□□□□□ -1.13
KDM3A-211ENST00000483866 SHROOM4Q9ULL8 1493 aa7.96□□□□□ -1.13
KDM3A-211ENST00000483866 GABBR2O75899 941 aa7.94□□□□□ -1.14
KDM3A-211ENST00000483866 TSPYL2Q9H2G4 693 aaPredicted RBP7.94□□□□□ -1.14
KDM3A-211ENST00000483866 C19orf67A6NJJ6 358 aa7.92□□□□□ -1.14
KDM3A-211ENST00000483866 ZNF467Q7Z7K2 595 aaPredicted RBP7.92□□□□□ -1.14
KDM3A-211ENST00000483866 BICRAQ9NZM4 1560 aa7.92□□□□□ -1.14
KDM3A-211ENST00000483866 P3H3Q8IVL6 736 aa7.9□□□□□ -1.14
KDM3A-211ENST00000483866 POTEIP0CG38 1075 aa7.88□□□□□ -1.15
KDM3A-211ENST00000483866 PDAP1Q13442 181 aaKnown RBP7.88□□□□□ -1.15
KDM3A-211ENST00000483866 WDR70Q9NW82 654 aa7.88□□□□□ -1.15
KDM3A-211ENST00000483866 PCDHB8Q9UN66 801 aa7.86□□□□□ -1.15
KDM3A-211ENST00000483866 FARP1Q9Y4F1 1045 aaPredicted RBP7.86□□□□□ -1.15
KDM3A-211ENST00000483866 PCDHB13Q9Y5F0 798 aa7.86□□□□□ -1.15
KDM3A-211ENST00000483866 PSEN1P49768 467 aa7.83□□□□□ -1.16
KDM3A-211ENST00000483866 CADPS2Q86UW7 1296 aa7.83□□□□□ -1.16
KDM3A-211ENST00000483866 CD44P16070 742 aaKnown RBP7.81□□□□□ -1.16
KDM3A-211ENST00000483866 ZNF579Q8NAF0 562 aaKnown RBP7.81□□□□□ -1.16
KDM3A-211ENST00000483866 KCNV2Q8TDN2 545 aa7.81□□□□□ -1.16
KDM3A-211ENST00000483866 PAK3O75914 559 aaPredicted RBP7.8□□□□□ -1.16
KDM3A-211ENST00000483866 CCDC61Q9Y6R9 512 aa7.8□□□□□ -1.16
KDM3A-211ENST00000483866 MFRPQ9BY79 579 aa7.79□□□□□ -1.16
KDM3A-211ENST00000483866 BAZ1AQ9NRL2 1556 aaPredicted RBP7.79□□□□□ -1.16
KDM3A-211ENST00000483866 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
KDM3A-211ENST00000483866 LMOD2Q6P5Q4 547 aa7.76□□□□□ -1.17
KDM3A-211ENST00000483866 CLCN6P51797 869 aa7.74□□□□□ -1.17
KDM3A-211ENST00000483866 NLRP6P59044 892 aa7.74□□□□□ -1.17
KDM3A-211ENST00000483866 IFNL1Q8IU54 200 aa7.74□□□□□ -1.17
KDM3A-211ENST00000483866 EFCAB3Q8N7B9 438 aa7.74□□□□□ -1.17
KDM3A-211ENST00000483866 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
KDM3A-211ENST00000483866 CECR2Q9BXF3 1484 aa7.74□□□□□ -1.17
KDM3A-211ENST00000483866 SMARCA4P51532 1647 aa7.74□□□□□ -1.17
KDM3A-211ENST00000483866 PPP1R37O75864 691 aa7.73□□□□□ -1.17
KDM3A-211ENST00000483866 GTF3C3Q9Y5Q9 886 aa7.73□□□□□ -1.17
KDM3A-211ENST00000483866 MAP3K13O43283 966 aa7.72□□□□□ -1.17
KDM3A-211ENST00000483866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.72□□□□□ -1.17
KDM3A-211ENST00000483866 ZRANB1Q9UGI0 708 aa7.72□□□□□ -1.17
KDM3A-211ENST00000483866 RSF1Q96T23 1441 aaPredicted RBP7.71□□□□□ -1.17
KDM3A-211ENST00000483866 SOX12O15370 315 aa7.71□□□□□ -1.18
KDM3A-211ENST00000483866 PHF8Q9UPP1 1060 aa7.71□□□□□ -1.18
KDM3A-211ENST00000483866 EIF4G1Q04637 1599 aaKnown RBP7.71□□□□□ -1.18
KDM3A-211ENST00000483866 E2F4Q16254 413 aa7.7□□□□□ -1.18
KDM3A-211ENST00000483866 FBXO22Q8NEZ5 403 aa7.7□□□□□ -1.18
KDM3A-211ENST00000483866 KIF12Q96FN5 646 aa7.7□□□□□ -1.18
KDM3A-211ENST00000483866 TIMELESSQ9UNS1 1208 aa7.7□□□□□ -1.18
KDM3A-211ENST00000483866 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
KDM3A-211ENST00000483866 PEG3Q9GZU2 1588 aa7.69□□□□□ -1.18
KDM3A-211ENST00000483866 ARHGEF1Q92888 912 aaKnown RBP7.69□□□□□ -1.18
KDM3A-211ENST00000483866 SMARCA2P51531 1590 aa7.68□□□□□ -1.18
KDM3A-211ENST00000483866 TMEM132AQ24JP5 1023 aa7.68□□□□□ -1.18
KDM3A-211ENST00000483866 DCBLD2Q96PD2 775 aa7.67□□□□□ -1.18
KDM3A-211ENST00000483866 POTEMA6NI47 508 aa7.66□□□□□ -1.18
KDM3A-211ENST00000483866 SUPT5HO00267 1087 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms