RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
NSMCE4A-210ENST00000483541 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
NSMCE4A-210ENST00000483541 POTEMA6NI47 508 aa12.22□□□□□ -0.45
NSMCE4A-210ENST00000483541 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
NSMCE4A-210ENST00000483541 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
NSMCE4A-210ENST00000483541 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
NSMCE4A-210ENST00000483541 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
NSMCE4A-210ENST00000483541 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
NSMCE4A-210ENST00000483541 C7P10643 843 aa12.13□□□□□ -0.47
NSMCE4A-210ENST00000483541 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
NSMCE4A-210ENST00000483541 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
NSMCE4A-210ENST00000483541 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
NSMCE4A-210ENST00000483541 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
NSMCE4A-210ENST00000483541 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
NSMCE4A-210ENST00000483541 NUBP1P53384 320 aa12.1□□□□□ -0.47
NSMCE4A-210ENST00000483541 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
NSMCE4A-210ENST00000483541 MAMSTRQ6ZN01 415 aa12.09□□□□□ -0.47
NSMCE4A-210ENST00000483541 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
NSMCE4A-210ENST00000483541 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
NSMCE4A-210ENST00000483541 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
NSMCE4A-210ENST00000483541 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
NSMCE4A-210ENST00000483541 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
NSMCE4A-210ENST00000483541 LCE2DQ5TA82 110 aaPredicted RBP11.98□□□□□ -0.49
NSMCE4A-210ENST00000483541 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
NSMCE4A-210ENST00000483541 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
NSMCE4A-210ENST00000483541 SCUBE2Q9NQ36 999 aa11.96□□□□□ -0.49
NSMCE4A-210ENST00000483541 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
NSMCE4A-210ENST00000483541 SGIP1Q9BQI5 828 aa11.94□□□□□ -0.5
NSMCE4A-210ENST00000483541 SPOCK2Q92563 424 aa11.93□□□□□ -0.5
NSMCE4A-210ENST00000483541 MAP3K13O43283 966 aa11.91□□□□□ -0.5
NSMCE4A-210ENST00000483541 GSE1Q14687 1217 aa11.91□□□□□ -0.5
NSMCE4A-210ENST00000483541 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
NSMCE4A-210ENST00000483541 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
NSMCE4A-210ENST00000483541 TIE1P35590 1138 aa11.88□□□□□ -0.51
NSMCE4A-210ENST00000483541 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
NSMCE4A-210ENST00000483541 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
NSMCE4A-210ENST00000483541 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
NSMCE4A-210ENST00000483541 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
NSMCE4A-210ENST00000483541 PYGBP11216 843 aa11.8□□□□□ -0.52
NSMCE4A-210ENST00000483541 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
NSMCE4A-210ENST00000483541 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
NSMCE4A-210ENST00000483541 CIZ1Q9ULV3 898 aaPredicted RBP11.76□□□□□ -0.53
NSMCE4A-210ENST00000483541 IER5LQ5T953 404 aa11.74□□□□□ -0.53
NSMCE4A-210ENST00000483541 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
NSMCE4A-210ENST00000483541 SEC24BO95487 1268 aa11.72□□□□□ -0.53
NSMCE4A-210ENST00000483541 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
NSMCE4A-210ENST00000483541 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
NSMCE4A-210ENST00000483541 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
NSMCE4A-210ENST00000483541 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
NSMCE4A-210ENST00000483541 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
NSMCE4A-210ENST00000483541 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
NSMCE4A-210ENST00000483541 ST18O60284 1047 aa11.58□□□□□ -0.56
NSMCE4A-210ENST00000483541 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
NSMCE4A-210ENST00000483541 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
NSMCE4A-210ENST00000483541 PSEN1P49768 467 aa11.56□□□□□ -0.56
NSMCE4A-210ENST00000483541 PLCG2P16885 1265 aa11.52□□□□□ -0.57
NSMCE4A-210ENST00000483541 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.57
NSMCE4A-210ENST00000483541 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
NSMCE4A-210ENST00000483541 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
NSMCE4A-210ENST00000483541 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
NSMCE4A-210ENST00000483541 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
NSMCE4A-210ENST00000483541 MKRN3Q13064 507 aaKnown RBP11.45□□□□□ -0.58
NSMCE4A-210ENST00000483541 PKD2Q13563 968 aa11.45□□□□□ -0.58
NSMCE4A-210ENST00000483541 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
NSMCE4A-210ENST00000483541 SNPHO15079 494 aa11.44□□□□□ -0.58
NSMCE4A-210ENST00000483541 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
NSMCE4A-210ENST00000483541 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
NSMCE4A-210ENST00000483541 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
NSMCE4A-210ENST00000483541 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
NSMCE4A-210ENST00000483541 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
NSMCE4A-210ENST00000483541 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
NSMCE4A-210ENST00000483541 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.38□□□□□ -0.59
NSMCE4A-210ENST00000483541 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
NSMCE4A-210ENST00000483541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.596e-7■■■□□ 16.9
NSMCE4A-210ENST00000483541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
NSMCE4A-210ENST00000483541 ZFP91Q96JP5 570 aaPredicted RBP11.36□□□□□ -0.59
NSMCE4A-210ENST00000483541 PDCD7Q8N8D1 485 aaKnown RBP11.35□□□□□ -0.59
NSMCE4A-210ENST00000483541 RGL2O15211 777 aa11.32□□□□□ -0.6
NSMCE4A-210ENST00000483541 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
NSMCE4A-210ENST00000483541 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
NSMCE4A-210ENST00000483541 SOX12O15370 315 aa11.29□□□□□ -0.6
NSMCE4A-210ENST00000483541 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
NSMCE4A-210ENST00000483541 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
NSMCE4A-210ENST00000483541 STK25O00506 426 aa11.24□□□□□ -0.61
NSMCE4A-210ENST00000483541 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
NSMCE4A-210ENST00000483541 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
NSMCE4A-210ENST00000483541 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
NSMCE4A-210ENST00000483541 EMP3P54852 163 aa11.21□□□□□ -0.61
NSMCE4A-210ENST00000483541 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
NSMCE4A-210ENST00000483541 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
NSMCE4A-210ENST00000483541 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
NSMCE4A-210ENST00000483541 G3V3G9 751 aa11.18□□□□□ -0.62
NSMCE4A-210ENST00000483541 NLRP6P59044 892 aa11.18□□□□□ -0.62
NSMCE4A-210ENST00000483541 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
NSMCE4A-210ENST00000483541 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
NSMCE4A-210ENST00000483541 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
NSMCE4A-210ENST00000483541 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
NSMCE4A-210ENST00000483541 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
NSMCE4A-210ENST00000483541 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
NSMCE4A-210ENST00000483541 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms