RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
SGIP1-210ENST00000483060 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
SGIP1-210ENST00000483060 C7P10643 843 aa15.52■□□□□ 0.08
SGIP1-210ENST00000483060 METRNQ9UJH8 293 aa15.52■□□□□ 0.08
SGIP1-210ENST00000483060 CCDC61Q9Y6R9 512 aa15.51■□□□□ 0.07
SGIP1-210ENST00000483060 PLSCR2Q9NRY7 297 aa15.46■□□□□ 0.07
SGIP1-210ENST00000483060 MIER1Q8N108 512 aa15.43■□□□□ 0.06
SGIP1-210ENST00000483060 KIF12Q96FN5 646 aa15.43■□□□□ 0.06
SGIP1-210ENST00000483060 MAMSTRQ6ZN01 415 aa15.41■□□□□ 0.06
SGIP1-210ENST00000483060 ATN1P54259 1190 aaPredicted RBP15.38■□□□□ 0.05
SGIP1-210ENST00000483060 POTEMA6NI47 508 aa15.35■□□□□ 0.05
SGIP1-210ENST00000483060 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
SGIP1-210ENST00000483060 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
SGIP1-210ENST00000483060 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
SGIP1-210ENST00000483060 MAP3K13O43283 966 aa15.31■□□□□ 0.04
SGIP1-210ENST00000483060 TIE1P35590 1138 aa15.31■□□□□ 0.04
SGIP1-210ENST00000483060 POTEGQ6S5H5 508 aa15.3■□□□□ 0.04
SGIP1-210ENST00000483060 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
SGIP1-210ENST00000483060 PLCD3Q8N3E9 789 aa15.28■□□□□ 0.04
SGIP1-210ENST00000483060 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
SGIP1-210ENST00000483060 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
SGIP1-210ENST00000483060 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
SGIP1-210ENST00000483060 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.03
SGIP1-210ENST00000483060 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
SGIP1-210ENST00000483060 TTLL13PA6NNM8 815 aa15.18■□□□□ 0.02
SGIP1-210ENST00000483060 PCDHB13Q9Y5F0 798 aa15.15■□□□□ 0.02
SGIP1-210ENST00000483060 SEC24BO95487 1268 aa15.14■□□□□ 0.01
SGIP1-210ENST00000483060 NUBP1P53384 320 aa15.13■□□□□ 0.01
SGIP1-210ENST00000483060 IER5LQ5T953 404 aa15.11■□□□□ 0.01
SGIP1-210ENST00000483060 FAM163AQ96GL9 167 aaPredicted RBP15.11■□□□□ 0.01
SGIP1-210ENST00000483060 TRIM35Q9UPQ4 493 aa15.09■□□□□ 0.01
SGIP1-210ENST00000483060 FAM212AQ96EL1 285 aa15.08■□□□□ 0
SGIP1-210ENST00000483060 COLQQ9Y215 455 aaPredicted RBP15.08■□□□□ 0
SGIP1-210ENST00000483060 LCE2DQ5TA82 110 aaPredicted RBP15.07■□□□□ 0
SGIP1-210ENST00000483060 IFNL1Q8IU54 200 aa15.03■□□□□ -0
SGIP1-210ENST00000483060 FKBP8Q14318 412 aa15.01□□□□□ -0.01
SGIP1-210ENST00000483060 TMEM106CQ9BVX2 250 aa14.98□□□□□ -0.01
SGIP1-210ENST00000483060 PLCG2P16885 1265 aa14.91□□□□□ -0.02
SGIP1-210ENST00000483060 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
SGIP1-210ENST00000483060 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
SGIP1-210ENST00000483060 SLAIN1Q8ND83 568 aa14.87□□□□□ -0.03
SGIP1-210ENST00000483060 IRX5P78411 483 aaPredicted RBP14.85□□□□□ -0.03
SGIP1-210ENST00000483060 PYGBP11216 843 aa14.83□□□□□ -0.04
SGIP1-210ENST00000483060 OCEL1Q9H607 264 aa14.8□□□□□ -0.04
SGIP1-210ENST00000483060 CDAN1Q8IWY9 1227 aa14.77□□□□□ -0.05
SGIP1-210ENST00000483060 ST18O60284 1047 aa14.75□□□□□ -0.05
SGIP1-210ENST00000483060 PCDHB8Q9UN66 801 aa14.75□□□□□ -0.05
SGIP1-210ENST00000483060 GSE1Q14687 1217 aa14.71□□□□□ -0.05
SGIP1-210ENST00000483060 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
SGIP1-210ENST00000483060 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.69□□□□□ -0.06
SGIP1-210ENST00000483060 SNPHO15079 494 aa14.68□□□□□ -0.06
SGIP1-210ENST00000483060 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
SGIP1-210ENST00000483060 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
SGIP1-210ENST00000483060 TMEM121BQ9BXQ6 578 aaPredicted RBP14.65□□□□□ -0.06
SGIP1-210ENST00000483060 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
SGIP1-210ENST00000483060 CHRM1P11229 460 aaPredicted RBP14.61□□□□□ -0.07
SGIP1-210ENST00000483060 MKRN3Q13064 507 aaKnown RBP14.6□□□□□ -0.07
SGIP1-210ENST00000483060 PDCD7Q8N8D1 485 aaKnown RBP14.57□□□□□ -0.08
SGIP1-210ENST00000483060 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
SGIP1-210ENST00000483060 C3orf67Q6ZVT6 689 aa14.55□□□□□ -0.08
SGIP1-210ENST00000483060 PSEN1P49768 467 aa14.52□□□□□ -0.09
SGIP1-210ENST00000483060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.5□□□□□ -0.09
SGIP1-210ENST00000483060 PDAP1Q13442 181 aaKnown RBP14.45□□□□□ -0.1
SGIP1-210ENST00000483060 MARVELD3Q96A59 401 aa14.45□□□□□ -0.1
SGIP1-210ENST00000483060 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
SGIP1-210ENST00000483060 SPNS2Q8IVW8 549 aa14.41□□□□□ -0.1
SGIP1-210ENST00000483060 MMRN1Q13201 1228 aa14.4□□□□□ -0.1
SGIP1-210ENST00000483060 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
SGIP1-210ENST00000483060 EMP3P54852 163 aa14.38□□□□□ -0.11
SGIP1-210ENST00000483060 CIZ1Q9ULV3 898 aaPredicted RBP14.36□□□□□ -0.11
SGIP1-210ENST00000483060 G3V3G9 751 aa14.34□□□□□ -0.11
SGIP1-210ENST00000483060 CABP2Q9NPB3 220 aa14.34□□□□□ -0.11
SGIP1-210ENST00000483060 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
SGIP1-210ENST00000483060 DPY19L2Q6NUT2 758 aa14.3□□□□□ -0.12
SGIP1-210ENST00000483060 BOLA1Q9Y3E2 137 aa14.29□□□□□ -0.12
SGIP1-210ENST00000483060 HS3ST6Q96QI5 342 aa14.27□□□□□ -0.13
SGIP1-210ENST00000483060 FAM205CA6NFA0 338 aa14.26□□□□□ -0.13
SGIP1-210ENST00000483060 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
SGIP1-210ENST00000483060 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
SGIP1-210ENST00000483060 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
SGIP1-210ENST00000483060 KRTAP3-3Q9BYR6 98 aa14.2□□□□□ -0.14
SGIP1-210ENST00000483060 KRTAP3-2Q9BYR7 98 aa14.2□□□□□ -0.14
SGIP1-210ENST00000483060 HOXB3P14651 431 aaPredicted RBP14.18□□□□□ -0.14
SGIP1-210ENST00000483060 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
SGIP1-210ENST00000483060 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
SGIP1-210ENST00000483060 HOXB1P14653 301 aaPredicted RBP14.13□□□□□ -0.15
SGIP1-210ENST00000483060 EFCAB3Q8N7B9 438 aa14.12□□□□□ -0.15
SGIP1-210ENST00000483060 RIMBP2O15034 1052 aa14.09□□□□□ -0.15
SGIP1-210ENST00000483060 ERBB3P21860 1342 aa14.06□□□□□ -0.16
SGIP1-210ENST00000483060 SOX12O15370 315 aa14.03□□□□□ -0.16
SGIP1-210ENST00000483060 MICALL2Q8IY33 904 aa14.02□□□□□ -0.17
SGIP1-210ENST00000483060 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
SGIP1-210ENST00000483060 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
SGIP1-210ENST00000483060 VGFO15240 615 aaPredicted RBP13.95□□□□□ -0.18
SGIP1-210ENST00000483060 VARS2Q5ST30 1063 aaKnown RBP13.94□□□□□ -0.18
SGIP1-210ENST00000483060 TMEM92Q6UXU6 159 aa13.94□□□□□ -0.18
SGIP1-210ENST00000483060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
SGIP1-210ENST00000483060 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
SGIP1-210ENST00000483060 RNF25Q96BH1 459 aaPredicted RBP13.91□□□□□ -0.18
SGIP1-210ENST00000483060 MS4A4AQ96JQ5 239 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms