RNA–Protein interactions for RNA: ENST00000482778.1

RGPD5-210, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 405 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-210ENST00000482778 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
RGPD5-210ENST00000482778 C7P10643 843 aa11.93□□□□□ -0.5
RGPD5-210ENST00000482778 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-210ENST00000482778 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
RGPD5-210ENST00000482778 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
RGPD5-210ENST00000482778 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
RGPD5-210ENST00000482778 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
RGPD5-210ENST00000482778 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
RGPD5-210ENST00000482778 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
RGPD5-210ENST00000482778 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
RGPD5-210ENST00000482778 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
RGPD5-210ENST00000482778 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
RGPD5-210ENST00000482778 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
RGPD5-210ENST00000482778 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
RGPD5-210ENST00000482778 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
RGPD5-210ENST00000482778 MAP3K13O43283 966 aa11.69□□□□□ -0.54
RGPD5-210ENST00000482778 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
RGPD5-210ENST00000482778 MIER1Q8N108 512 aa11.68□□□□□ -0.54
RGPD5-210ENST00000482778 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
RGPD5-210ENST00000482778 SEC24BO95487 1268 aa11.67□□□□□ -0.54
RGPD5-210ENST00000482778 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
RGPD5-210ENST00000482778 PROM2Q8N271 834 aa11.66□□□□□ -0.54
RGPD5-210ENST00000482778 TIE1P35590 1138 aa11.65□□□□□ -0.54
RGPD5-210ENST00000482778 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
RGPD5-210ENST00000482778 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
RGPD5-210ENST00000482778 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
RGPD5-210ENST00000482778 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
RGPD5-210ENST00000482778 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
RGPD5-210ENST00000482778 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
RGPD5-210ENST00000482778 PCDHB13Q9Y5F0 798 aa11.53□□□□□ -0.56
RGPD5-210ENST00000482778 IER5LQ5T953 404 aa11.51□□□□□ -0.57
RGPD5-210ENST00000482778 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
RGPD5-210ENST00000482778 SGIP1Q9BQI5 828 aa11.49□□□□□ -0.57
RGPD5-210ENST00000482778 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
RGPD5-210ENST00000482778 ST18O60284 1047 aa11.42□□□□□ -0.58
RGPD5-210ENST00000482778 PLCG2P16885 1265 aa11.42□□□□□ -0.58
RGPD5-210ENST00000482778 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
RGPD5-210ENST00000482778 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
RGPD5-210ENST00000482778 NUBP1P53384 320 aa11.39□□□□□ -0.59
RGPD5-210ENST00000482778 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
RGPD5-210ENST00000482778 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
RGPD5-210ENST00000482778 OCEL1Q9H607 264 aa11.3□□□□□ -0.6
RGPD5-210ENST00000482778 SNPHO15079 494 aa11.27□□□□□ -0.61
RGPD5-210ENST00000482778 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
RGPD5-210ENST00000482778 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
RGPD5-210ENST00000482778 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
RGPD5-210ENST00000482778 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
RGPD5-210ENST00000482778 PYGBP11216 843 aa11.24□□□□□ -0.61
RGPD5-210ENST00000482778 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
RGPD5-210ENST00000482778 MARVELD3Q96A59 401 aa11.24□□□□□ -0.61
RGPD5-210ENST00000482778 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
RGPD5-210ENST00000482778 C3orf67Q6ZVT6 689 aa11.15□□□□□ -0.62
RGPD5-210ENST00000482778 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
RGPD5-210ENST00000482778 EMP3P54852 163 aa11.12□□□□□ -0.63
RGPD5-210ENST00000482778 FKBP8Q14318 412 aa11.12□□□□□ -0.63
RGPD5-210ENST00000482778 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
RGPD5-210ENST00000482778 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
RGPD5-210ENST00000482778 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
RGPD5-210ENST00000482778 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
RGPD5-210ENST00000482778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.64
RGPD5-210ENST00000482778 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
RGPD5-210ENST00000482778 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
RGPD5-210ENST00000482778 GSE1Q14687 1217 aa11.02□□□□□ -0.65
RGPD5-210ENST00000482778 HS3ST6Q96QI5 342 aa11.02□□□□□ -0.65
RGPD5-210ENST00000482778 FBXO3Q9UK99 471 aa11.02□□□□□ -0.65
RGPD5-210ENST00000482778 PSEN1P49768 467 aa10.98□□□□□ -0.65
RGPD5-210ENST00000482778 POTEB3A0JP26 581 aa10.97□□□□□ -0.65
RGPD5-210ENST00000482778 POTEBQ6S5H4 581 aa10.97□□□□□ -0.65
RGPD5-210ENST00000482778 KRTAP3-3Q9BYR6 98 aa10.97□□□□□ -0.65
RGPD5-210ENST00000482778 KRTAP3-2Q9BYR7 98 aa10.97□□□□□ -0.65
RGPD5-210ENST00000482778 G3V3G9 751 aa10.95□□□□□ -0.66
RGPD5-210ENST00000482778 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
RGPD5-210ENST00000482778 DPY19L2Q6NUT2 758 aa10.91□□□□□ -0.66
RGPD5-210ENST00000482778 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
RGPD5-210ENST00000482778 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
RGPD5-210ENST00000482778 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
RGPD5-210ENST00000482778 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
RGPD5-210ENST00000482778 CABP2Q9NPB3 220 aa10.86□□□□□ -0.67
RGPD5-210ENST00000482778 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
RGPD5-210ENST00000482778 ERBB3P21860 1342 aa10.84□□□□□ -0.67
RGPD5-210ENST00000482778 HOXB3P14651 431 aaPredicted RBP10.82□□□□□ -0.68
RGPD5-210ENST00000482778 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
RGPD5-210ENST00000482778 DOK7Q18PE1 504 aa10.8□□□□□ -0.68
RGPD5-210ENST00000482778 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
RGPD5-210ENST00000482778 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
RGPD5-210ENST00000482778 RIMBP2O15034 1052 aa10.76□□□□□ -0.69
RGPD5-210ENST00000482778 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
RGPD5-210ENST00000482778 SPOCK2Q92563 424 aa10.71□□□□□ -0.69
RGPD5-210ENST00000482778 MYT1LQ9UL68 1186 aa10.71□□□□□ -0.69
RGPD5-210ENST00000482778 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
RGPD5-210ENST00000482778 ZNF687Q8N1G0 1237 aa10.64□□□□□ -0.71
RGPD5-210ENST00000482778 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
RGPD5-210ENST00000482778 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
RGPD5-210ENST00000482778 MICALL2Q8IY33 904 aa10.61□□□□□ -0.71
RGPD5-210ENST00000482778 TMEM92Q6UXU6 159 aa10.59□□□□□ -0.71
RGPD5-210ENST00000482778 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
RGPD5-210ENST00000482778 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
RGPD5-210ENST00000482778 PTGER2P43116 358 aa10.57□□□□□ -0.72
RGPD5-210ENST00000482778 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
RGPD5-210ENST00000482778 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms