RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 GABBR2O75899 941 aa11.33□□□□□ -0.6
GTF3A-207ENST00000482655 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
GTF3A-207ENST00000482655 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
GTF3A-207ENST00000482655 CCDC61Q9Y6R9 512 aa11.29□□□□□ -0.6
GTF3A-207ENST00000482655 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
GTF3A-207ENST00000482655 GSE1Q14687 1217 aa11.24□□□□□ -0.61
GTF3A-207ENST00000482655 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
GTF3A-207ENST00000482655 KIF12Q96FN5 646 aa11.2□□□□□ -0.62
GTF3A-207ENST00000482655 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
GTF3A-207ENST00000482655 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
GTF3A-207ENST00000482655 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
GTF3A-207ENST00000482655 MAP3K13O43283 966 aa11.17□□□□□ -0.62
GTF3A-207ENST00000482655 PYGBP11216 843 aa11.15□□□□□ -0.62
GTF3A-207ENST00000482655 PCDHB13Q9Y5F0 798 aa11.15□□□□□ -0.62
GTF3A-207ENST00000482655 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
GTF3A-207ENST00000482655 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
GTF3A-207ENST00000482655 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
GTF3A-207ENST00000482655 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
GTF3A-207ENST00000482655 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
GTF3A-207ENST00000482655 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
GTF3A-207ENST00000482655 TIE1P35590 1138 aa11.02□□□□□ -0.65
GTF3A-207ENST00000482655 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
GTF3A-207ENST00000482655 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
GTF3A-207ENST00000482655 TRPC6Q9Y210 931 aa11□□□□□ -0.65
GTF3A-207ENST00000482655 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
GTF3A-207ENST00000482655 BMP2KQ9NSY1 1161 aaPredicted RBP10.99□□□□□ -0.65
GTF3A-207ENST00000482655 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
GTF3A-207ENST00000482655 TMEM106CQ9BVX2 250 aa10.96□□□□□ -0.65
GTF3A-207ENST00000482655 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
GTF3A-207ENST00000482655 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
GTF3A-207ENST00000482655 SLC39A7Q92504 469 aa10.92□□□□□ -0.66
GTF3A-207ENST00000482655 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
GTF3A-207ENST00000482655 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
GTF3A-207ENST00000482655 PSEN1P49768 467 aa10.9□□□□□ -0.66
GTF3A-207ENST00000482655 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
GTF3A-207ENST00000482655 C7P10643 843 aa10.89□□□□□ -0.67
GTF3A-207ENST00000482655 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
GTF3A-207ENST00000482655 RIOK3O14730 519 aaKnown RBP10.88□□□□□ -0.67
GTF3A-207ENST00000482655 PKD2Q13563 968 aa10.87□□□□□ -0.67
GTF3A-207ENST00000482655 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
GTF3A-207ENST00000482655 IER5LQ5T953 404 aa10.84□□□□□ -0.67
GTF3A-207ENST00000482655 RNF25Q96BH1 459 aaPredicted RBP10.84□□□□□ -0.67
GTF3A-207ENST00000482655 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
GTF3A-207ENST00000482655 SEC24BO95487 1268 aa10.83□□□□□ -0.68
GTF3A-207ENST00000482655 LHX8Q68G74 356 aa10.83□□□□□ -0.68
GTF3A-207ENST00000482655 VGFO15240 615 aaPredicted RBP10.82□□□□□ -0.68
GTF3A-207ENST00000482655 MKRN3Q13064 507 aaKnown RBP10.79□□□□□ -0.68
GTF3A-207ENST00000482655 RGL2O15211 777 aa10.77□□□□□ -0.69
GTF3A-207ENST00000482655 PLCG2P16885 1265 aa10.77□□□□□ -0.69
GTF3A-207ENST00000482655 CABP2Q9NPB3 220 aa10.77□□□□□ -0.69
GTF3A-207ENST00000482655 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
GTF3A-207ENST00000482655 ZFP91Q96JP5 570 aaPredicted RBP10.76□□□□□ -0.69
GTF3A-207ENST00000482655 COLQQ9Y215 455 aaPredicted RBP10.73□□□□□ -0.69
GTF3A-207ENST00000482655 OCEL1Q9H607 264 aa10.72□□□□□ -0.69
GTF3A-207ENST00000482655 IRX5P78411 483 aaPredicted RBP10.71□□□□□ -0.69
GTF3A-207ENST00000482655 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
GTF3A-207ENST00000482655 STK25O00506 426 aa10.7□□□□□ -0.7
GTF3A-207ENST00000482655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.72e-6■■□□□ 12.3
GTF3A-207ENST00000482655 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
GTF3A-207ENST00000482655 BCL11BQ9C0K0 894 aaPredicted RBP10.69□□□□□ -0.7
GTF3A-207ENST00000482655 STK24Q9Y6E0 443 aa10.69□□□□□ -0.7
GTF3A-207ENST00000482655 MAMSTRQ6ZN01 415 aa10.67□□□□□ -0.7
GTF3A-207ENST00000482655 EFCAB3Q8N7B9 438 aa10.66□□□□□ -0.7
GTF3A-207ENST00000482655 AMER1Q5JTC6 1135 aaPredicted RBP10.65□□□□□ -0.7
GTF3A-207ENST00000482655 SCUBE2Q9NQ36 999 aa10.65□□□□□ -0.7
GTF3A-207ENST00000482655 DCAF8L2P0C7V8 631 aa10.62□□□□□ -0.71
GTF3A-207ENST00000482655 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
GTF3A-207ENST00000482655 SOX12O15370 315 aa10.61□□□□□ -0.71
GTF3A-207ENST00000482655 POTEJP0CG39 1038 aa10.6□□□□□ -0.71
GTF3A-207ENST00000482655 OTUD5Q96G74 571 aa10.6□□□□□ -0.71
GTF3A-207ENST00000482655 L3MBTL3Q96JM7 780 aaPredicted RBP10.59□□□□□ -0.71
GTF3A-207ENST00000482655 G3V3G9 751 aa10.58□□□□□ -0.72
GTF3A-207ENST00000482655 CHGAP10645 457 aaKnown RBP10.58□□□□□ -0.72
GTF3A-207ENST00000482655 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
GTF3A-207ENST00000482655 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
GTF3A-207ENST00000482655 NLRP6P59044 892 aa10.55□□□□□ -0.72
GTF3A-207ENST00000482655 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
GTF3A-207ENST00000482655 PHF8Q9UPP1 1060 aa10.55□□□□□ -0.72
GTF3A-207ENST00000482655 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
GTF3A-207ENST00000482655 DPY19L2Q6NUT2 758 aa10.53□□□□□ -0.72
GTF3A-207ENST00000482655 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
GTF3A-207ENST00000482655 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
GTF3A-207ENST00000482655 MFRPQ9BY79 579 aa10.49□□□□□ -0.73
GTF3A-207ENST00000482655 SLAIN1Q8ND83 568 aa10.48□□□□□ -0.73
GTF3A-207ENST00000482655 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
GTF3A-207ENST00000482655 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
GTF3A-207ENST00000482655 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
GTF3A-207ENST00000482655 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
GTF3A-207ENST00000482655 TMEM121BQ9BXQ6 578 aaPredicted RBP10.41□□□□□ -0.74
GTF3A-207ENST00000482655 DNAJC5Q9H3Z4 198 aa10.41□□□□□ -0.74
GTF3A-207ENST00000482655 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
GTF3A-207ENST00000482655 SNPHO15079 494 aa10.34□□□□□ -0.75
GTF3A-207ENST00000482655 PPP1R37O75864 691 aa10.32□□□□□ -0.76
GTF3A-207ENST00000482655 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
GTF3A-207ENST00000482655 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
GTF3A-207ENST00000482655 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
GTF3A-207ENST00000482655 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
GTF3A-207ENST00000482655 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
GTF3A-207ENST00000482655 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
GTF3A-207ENST00000482655 DOK7Q18PE1 504 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms