RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 FARP1Q9Y4F1 1045 aaPredicted RBP21.32■■□□□ 1
CUL3-209ENST00000481135 CHGAP10645 457 aaKnown RBP21.31■■□□□ 1
CUL3-209ENST00000481135 PRKAR2AP13861 404 aaKnown RBP21.31■■□□□ 1
CUL3-209ENST00000481135 CHRM1P11229 460 aaPredicted RBP21.3■■□□□ 1
CUL3-209ENST00000481135 FXR2P51116 673 aaKnown RBP eCLIP21.29■■□□□ 1
CUL3-209ENST00000481135 RIOK3O14730 519 aaKnown RBP21.26■□□□□ 0.99
CUL3-209ENST00000481135 CHRDL2Q6WN34 429 aa21.26■□□□□ 0.99
CUL3-209ENST00000481135 HAP1P54257 671 aaPredicted RBP21.24■□□□□ 0.99
CUL3-209ENST00000481135 RNF25Q96BH1 459 aaPredicted RBP21.23■□□□□ 0.99
CUL3-209ENST00000481135 HS6ST3Q8IZP7 471 aa21.18■□□□□ 0.98
CUL3-209ENST00000481135 PAXIP1Q6ZW49 1069 aaPredicted RBP21.17■□□□□ 0.98
CUL3-209ENST00000481135 TSPYL2Q9H2G4 693 aaPredicted RBP21.16■□□□□ 0.98
CUL3-209ENST00000481135 PYGBP11216 843 aa21.15■□□□□ 0.98
CUL3-209ENST00000481135 VGFO15240 615 aaPredicted RBP21.14■□□□□ 0.97
CUL3-209ENST00000481135 CFAP44Q96MT7 982 aa21.13■□□□□ 0.97
CUL3-209ENST00000481135 SPRYD3Q8NCJ5 442 aa21.12■□□□□ 0.97
CUL3-209ENST00000481135 PIP4P2Q8N4L2 257 aa21.11■□□□□ 0.97
CUL3-209ENST00000481135 PAK3O75914 559 aaPredicted RBP21.07■□□□□ 0.96
CUL3-209ENST00000481135 SGIP1Q9BQI5 828 aa21.02■□□□□ 0.96
CUL3-209ENST00000481135 DNAJC5Q9H3Z4 198 aa21.02■□□□□ 0.96
CUL3-209ENST00000481135 STK25O00506 426 aa21.01■□□□□ 0.95
CUL3-209ENST00000481135 ZNF467Q7Z7K2 595 aaPredicted RBP20.99■□□□□ 0.95
CUL3-209ENST00000481135 VSIG10Q8N0Z9 540 aa20.96■□□□□ 0.95
CUL3-209ENST00000481135 CCDC61Q9Y6R9 512 aa20.94■□□□□ 0.94
CUL3-209ENST00000481135 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.91■□□□□ 0.94
CUL3-209ENST00000481135 ZFP91Q96JP5 570 aaPredicted RBP20.91■□□□□ 0.94
CUL3-209ENST00000481135 STK24Q9Y6E0 443 aa20.89■□□□□ 0.93
CUL3-209ENST00000481135 BCL11BQ9C0K0 894 aaPredicted RBP20.88■□□□□ 0.93
CUL3-209ENST00000481135 PDAP1Q13442 181 aaKnown RBP20.81■□□□□ 0.92
CUL3-209ENST00000481135 ZNF579Q8NAF0 562 aaKnown RBP20.81■□□□□ 0.92
CUL3-209ENST00000481135 RYDENQ9NUL5 291 aaKnown RBP20.79■□□□□ 0.92
CUL3-209ENST00000481135 NKX1-1Q15270 411 aaPredicted RBP20.77■□□□□ 0.92
CUL3-209ENST00000481135 PCDHB8Q9UN66 801 aa20.76■□□□□ 0.91
CUL3-209ENST00000481135 PCDHB13Q9Y5F0 798 aa20.76■□□□□ 0.91
CUL3-209ENST00000481135 CD44P16070 742 aaKnown RBP20.75■□□□□ 0.91
CUL3-209ENST00000481135 ZRANB1Q9UGI0 708 aa20.75■□□□□ 0.91
CUL3-209ENST00000481135 TSHZ2Q9NRE2 1034 aa20.72■□□□□ 0.91
CUL3-209ENST00000481135 KIF12Q96FN5 646 aa20.7■□□□□ 0.9
CUL3-209ENST00000481135 GTPBP6O43824 516 aaPredicted RBP20.69■□□□□ 0.9
CUL3-209ENST00000481135 PSEN1P49768 467 aa20.69■□□□□ 0.9
CUL3-209ENST00000481135 MAP3K13O43283 966 aa20.67■□□□□ 0.9
CUL3-209ENST00000481135 IFNL1Q8IU54 200 aa20.64■□□□□ 0.89
CUL3-209ENST00000481135 KDM2AQ9Y2K7 1162 aa20.62■□□□□ 0.89
CUL3-209ENST00000481135 C19orf67A6NJJ6 358 aa20.53■□□□□ 0.88
CUL3-209ENST00000481135 PHF12Q96QT6 1004 aa20.53■□□□□ 0.88
CUL3-209ENST00000481135 BCANQ96GW7 911 aa20.52■□□□□ 0.88
CUL3-209ENST00000481135 CABP2Q9NPB3 220 aa20.41■□□□□ 0.86
CUL3-209ENST00000481135 SOX12O15370 315 aa20.37■□□□□ 0.85
CUL3-209ENST00000481135 EFCAB3Q8N7B9 438 aa20.35■□□□□ 0.85
CUL3-209ENST00000481135 MFRPQ9BY79 579 aa20.35■□□□□ 0.85
CUL3-209ENST00000481135 NLRP6P59044 892 aa20.34■□□□□ 0.85
CUL3-209ENST00000481135 GOLGA2Q08379 1002 aa20.33■□□□□ 0.85
CUL3-209ENST00000481135 MS4A3Q96HJ5 214 aa20.33■□□□□ 0.85
CUL3-209ENST00000481135 HAX1O00165 279 aa20.31■□□□□ 0.84
CUL3-209ENST00000481135 TMEM106CQ9BVX2 250 aa20.3■□□□□ 0.84
CUL3-209ENST00000481135 CLCN6P51797 869 aa20.27■□□□□ 0.84
CUL3-209ENST00000481135 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
CUL3-209ENST00000481135 TIE1P35590 1138 aa20.21■□□□□ 0.83
CUL3-209ENST00000481135 FBXO22Q8NEZ5 403 aa20.21■□□□□ 0.83
CUL3-209ENST00000481135 MKRN3Q13064 507 aaKnown RBP20.19■□□□□ 0.82
CUL3-209ENST00000481135 TRPC6Q9Y210 931 aa20.17■□□□□ 0.82
CUL3-209ENST00000481135 NBR1Q14596 966 aa20.12■□□□□ 0.81
CUL3-209ENST00000481135 WDR70Q9NW82 654 aa20.12■□□□□ 0.81
CUL3-209ENST00000481135 TTLL13PA6NNM8 815 aa20.09■□□□□ 0.81
CUL3-209ENST00000481135 GALR2O43603 387 aaPredicted RBP20.08■□□□□ 0.81
CUL3-209ENST00000481135 PPP1R37O75864 691 aa20.08■□□□□ 0.81
CUL3-209ENST00000481135 BMP2KQ9NSY1 1161 aaPredicted RBP20.05■□□□□ 0.8
CUL3-209ENST00000481135 CADPS2Q86UW7 1296 aa20.04■□□□□ 0.8
CUL3-209ENST00000481135 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
CUL3-209ENST00000481135 EVX2Q03828 476 aa20.02■□□□□ 0.8
CUL3-209ENST00000481135 MS4A4AQ96JQ5 239 aa19.99■□□□□ 0.79
CUL3-209ENST00000481135 TRIM35Q9UPQ4 493 aa19.98■□□□□ 0.79
CUL3-209ENST00000481135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.96■□□□□ 0.794e-7■■□□□ 13.1
CUL3-209ENST00000481135 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
CUL3-209ENST00000481135 PDE4AP27815 886 aa19.86■□□□□ 0.77
CUL3-209ENST00000481135 ATN1P54259 1190 aaPredicted RBP19.83■□□□□ 0.77
CUL3-209ENST00000481135 POTEHQ6S545 545 aa19.83■□□□□ 0.77
CUL3-209ENST00000481135 ATMINO43313 823 aaPredicted RBP19.82■□□□□ 0.76
CUL3-209ENST00000481135 ASTLQ6HA08 431 aaPredicted RBP19.82■□□□□ 0.76
CUL3-209ENST00000481135 IER5LQ5T953 404 aa19.8■□□□□ 0.76
CUL3-209ENST00000481135 GABBR2O75899 941 aa19.79■□□□□ 0.76
CUL3-209ENST00000481135 KCNV2Q8TDN2 545 aa19.78■□□□□ 0.76
CUL3-209ENST00000481135 E2F4Q16254 413 aa19.76■□□□□ 0.75
CUL3-209ENST00000481135 LARP6Q9BRS8 491 aaKnown RBP19.76■□□□□ 0.75
CUL3-209ENST00000481135 NCKAP5LQ9HCH0 1330 aa19.74■□□□□ 0.75
CUL3-209ENST00000481135 TPRNQ4KMQ1 711 aa19.73■□□□□ 0.75
CUL3-209ENST00000481135 DCBLD2Q96PD2 775 aa19.73■□□□□ 0.75
CUL3-209ENST00000481135 OCEL1Q9H607 264 aa19.73■□□□□ 0.75
CUL3-209ENST00000481135 CRISPLD2Q9H0B8 497 aa19.72■□□□□ 0.75
CUL3-209ENST00000481135 IRX5P78411 483 aaPredicted RBP19.69■□□□□ 0.74
CUL3-209ENST00000481135 MFSD10Q14728 455 aa19.69■□□□□ 0.74
CUL3-209ENST00000481135 DDX27Q96GQ7 796 aaKnown RBP19.69■□□□□ 0.74
CUL3-209ENST00000481135 G3V3G9 751 aa19.68■□□□□ 0.74
CUL3-209ENST00000481135 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
CUL3-209ENST00000481135 PRKCSHP14314 528 aaPredicted RBP19.67■□□□□ 0.74
CUL3-209ENST00000481135 DPY19L2Q6NUT2 758 aa19.67■□□□□ 0.74
CUL3-209ENST00000481135 PDCD7Q8N8D1 485 aaKnown RBP19.67■□□□□ 0.74
CUL3-209ENST00000481135 PLCG2P16885 1265 aa19.66■□□□□ 0.74
CUL3-209ENST00000481135 MICALL2Q8IY33 904 aa19.62■□□□□ 0.73
CUL3-209ENST00000481135 GPHNQ9NQX3 736 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms