RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 PKD2Q13563 968 aa16.26■□□□□ 0.19
GTF3C3-211ENST00000481098 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
GTF3C3-211ENST00000481098 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
GTF3C3-211ENST00000481098 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
GTF3C3-211ENST00000481098 ZRANB1Q9UGI0 708 aa16.22■□□□□ 0.19
GTF3C3-211ENST00000481098 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
GTF3C3-211ENST00000481098 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
GTF3C3-211ENST00000481098 EVX2Q03828 476 aa16.18■□□□□ 0.18
GTF3C3-211ENST00000481098 ECM2O94769 699 aaPredicted RBP16.1■□□□□ 0.17
GTF3C3-211ENST00000481098 PYGBP11216 843 aa16.08■□□□□ 0.16
GTF3C3-211ENST00000481098 PHF12Q96QT6 1004 aa16.08■□□□□ 0.16
GTF3C3-211ENST00000481098 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
GTF3C3-211ENST00000481098 CLCN6P51797 869 aa16.06■□□□□ 0.16
GTF3C3-211ENST00000481098 SGIP1Q9BQI5 828 aa16.05■□□□□ 0.16
GTF3C3-211ENST00000481098 MAP3K13O43283 966 aa16■□□□□ 0.15
GTF3C3-211ENST00000481098 RNF25Q96BH1 459 aaPredicted RBP15.98■□□□□ 0.15
GTF3C3-211ENST00000481098 RGL2O15211 777 aa15.96■□□□□ 0.15
GTF3C3-211ENST00000481098 ZNF467Q7Z7K2 595 aaPredicted RBP15.95■□□□□ 0.14
GTF3C3-211ENST00000481098 PCDHB13Q9Y5F0 798 aa15.95■□□□□ 0.14
GTF3C3-211ENST00000481098 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
GTF3C3-211ENST00000481098 RIOK3O14730 519 aaKnown RBP15.93■□□□□ 0.14
GTF3C3-211ENST00000481098 IFNL1Q8IU54 200 aa15.91■□□□□ 0.14
GTF3C3-211ENST00000481098 MS4A3Q96HJ5 214 aa15.9■□□□□ 0.14
GTF3C3-211ENST00000481098 GABBR2O75899 941 aa15.87■□□□□ 0.13
GTF3C3-211ENST00000481098 GALR2O43603 387 aaPredicted RBP15.86■□□□□ 0.13
GTF3C3-211ENST00000481098 PCDHB8Q9UN66 801 aa15.86■□□□□ 0.13
GTF3C3-211ENST00000481098 TAOK2Q9UL54 1235 aa15.84■□□□□ 0.13
GTF3C3-211ENST00000481098 VGFO15240 615 aaPredicted RBP15.83■□□□□ 0.12
GTF3C3-211ENST00000481098 PDAP1Q13442 181 aaKnown RBP15.8■□□□□ 0.12
GTF3C3-211ENST00000481098 TRPC6Q9Y210 931 aa15.76■□□□□ 0.11
GTF3C3-211ENST00000481098 TIE1P35590 1138 aa15.75■□□□□ 0.11
GTF3C3-211ENST00000481098 PSEN1P49768 467 aa15.75■□□□□ 0.11
GTF3C3-211ENST00000481098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.72■□□□□ 0.11
GTF3C3-211ENST00000481098 ZFP91Q96JP5 570 aaPredicted RBP15.72■□□□□ 0.11
GTF3C3-211ENST00000481098 HS6ST3Q8IZP7 471 aa15.69■□□□□ 0.1
GTF3C3-211ENST00000481098 BMP2KQ9NSY1 1161 aaPredicted RBP15.69■□□□□ 0.1
GTF3C3-211ENST00000481098 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
GTF3C3-211ENST00000481098 ASTLQ6HA08 431 aaPredicted RBP15.67■□□□□ 0.1
GTF3C3-211ENST00000481098 TTLL13PA6NNM8 815 aa15.66■□□□□ 0.1
GTF3C3-211ENST00000481098 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
GTF3C3-211ENST00000481098 STK25O00506 426 aa15.64■□□□□ 0.09
GTF3C3-211ENST00000481098 BCL11BQ9C0K0 894 aaPredicted RBP15.63■□□□□ 0.09
GTF3C3-211ENST00000481098 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
GTF3C3-211ENST00000481098 ATMINO43313 823 aaPredicted RBP15.62■□□□□ 0.09
GTF3C3-211ENST00000481098 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
GTF3C3-211ENST00000481098 DCBLD2Q96PD2 775 aa15.61■□□□□ 0.09
GTF3C3-211ENST00000481098 POTEIP0CG38 1075 aa15.57■□□□□ 0.08
GTF3C3-211ENST00000481098 STK24Q9Y6E0 443 aa15.57■□□□□ 0.08
GTF3C3-211ENST00000481098 ATN1P54259 1190 aaPredicted RBP15.56■□□□□ 0.08
GTF3C3-211ENST00000481098 TRIM35Q9UPQ4 493 aa15.54■□□□□ 0.08
GTF3C3-211ENST00000481098 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
GTF3C3-211ENST00000481098 PELP1Q8IZL8 1130 aaKnown RBP15.48■□□□□ 0.07
GTF3C3-211ENST00000481098 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
GTF3C3-211ENST00000481098 IER5LQ5T953 404 aa15.47■□□□□ 0.07
GTF3C3-211ENST00000481098 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
GTF3C3-211ENST00000481098 EFCAB3Q8N7B9 438 aa15.45■□□□□ 0.06
GTF3C3-211ENST00000481098 NKX1-1Q15270 411 aaPredicted RBP15.44■□□□□ 0.06
GTF3C3-211ENST00000481098 SOX12O15370 315 aa15.43■□□□□ 0.06
GTF3C3-211ENST00000481098 MKRN3Q13064 507 aaKnown RBP15.43■□□□□ 0.06
GTF3C3-211ENST00000481098 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
GTF3C3-211ENST00000481098 SLC39A7Q92504 469 aa15.41■□□□□ 0.06
GTF3C3-211ENST00000481098 C7P10643 843 aa15.39■□□□□ 0.05
GTF3C3-211ENST00000481098 MFRPQ9BY79 579 aa15.37■□□□□ 0.05
GTF3C3-211ENST00000481098 IRX5P78411 483 aaPredicted RBP15.36■□□□□ 0.05
GTF3C3-211ENST00000481098 FBXO22Q8NEZ5 403 aa15.35■□□□□ 0.05
GTF3C3-211ENST00000481098 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
GTF3C3-211ENST00000481098 NLRP6P59044 892 aa15.33■□□□□ 0.04
GTF3C3-211ENST00000481098 RYDENQ9NUL5 291 aaKnown RBP15.33■□□□□ 0.04
GTF3C3-211ENST00000481098 METRNQ9UJH8 293 aa15.33■□□□□ 0.04
GTF3C3-211ENST00000481098 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
GTF3C3-211ENST00000481098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■□□□□ 9.8
GTF3C3-211ENST00000481098 PDCD7Q8N8D1 485 aaKnown RBP15.3■□□□□ 0.04
GTF3C3-211ENST00000481098 OCEL1Q9H607 264 aa15.3■□□□□ 0.04
GTF3C3-211ENST00000481098 GTPBP6O43824 516 aaPredicted RBP15.29■□□□□ 0.04
GTF3C3-211ENST00000481098 MS4A4AQ96JQ5 239 aa15.28■□□□□ 0.04
GTF3C3-211ENST00000481098 POTEFA5A3E0 1075 aa15.27■□□□□ 0.04
GTF3C3-211ENST00000481098 COLQQ9Y215 455 aaPredicted RBP15.27■□□□□ 0.04
GTF3C3-211ENST00000481098 PLCG2P16885 1265 aa15.25■□□□□ 0.03
GTF3C3-211ENST00000481098 SEC24BO95487 1268 aa15.24■□□□□ 0.03
GTF3C3-211ENST00000481098 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
GTF3C3-211ENST00000481098 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
GTF3C3-211ENST00000481098 PAXIP1Q6ZW49 1069 aaPredicted RBP15.19■□□□□ 0.02
GTF3C3-211ENST00000481098 DPY19L2Q6NUT2 758 aa15.14■□□□□ 0.01
GTF3C3-211ENST00000481098 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
GTF3C3-211ENST00000481098 PPP1R37O75864 691 aa15.12■□□□□ 0.01
GTF3C3-211ENST00000481098 L3MBTL3Q96JM7 780 aaPredicted RBP15.11■□□□□ 0.01
GTF3C3-211ENST00000481098 TMEM121BQ9BXQ6 578 aaPredicted RBP15.1■□□□□ 0.01
GTF3C3-211ENST00000481098 BOLA1Q9Y3E2 137 aa15.08■□□□□ 0
GTF3C3-211ENST00000481098 POTEB2H3BUK9 544 aa15.06■□□□□ 0
GTF3C3-211ENST00000481098 MICALL2Q8IY33 904 aa15.05■□□□□ -0
GTF3C3-211ENST00000481098 POTEJP0CG39 1038 aa15.02■□□□□ -0
GTF3C3-211ENST00000481098 G3V3G9 751 aa14.99□□□□□ -0.01
GTF3C3-211ENST00000481098 LHX8Q68G74 356 aa14.94□□□□□ -0.02
GTF3C3-211ENST00000481098 MAMSTRQ6ZN01 415 aa14.94□□□□□ -0.02
GTF3C3-211ENST00000481098 C3orf67Q6ZVT6 689 aa14.91□□□□□ -0.02
GTF3C3-211ENST00000481098 TSHZ2Q9NRE2 1034 aa14.91□□□□□ -0.02
GTF3C3-211ENST00000481098 CADPS2Q86UW7 1296 aa14.89□□□□□ -0.03
GTF3C3-211ENST00000481098 SCUBE2Q9NQ36 999 aa14.88□□□□□ -0.03
GTF3C3-211ENST00000481098 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.87□□□□□ -0.03
GTF3C3-211ENST00000481098 HAP1P54257 671 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms