RNA–Protein interactions for RNA: ENST00000480960.1

CFHR1-205, Transcript of complement factor H related 1, humanhuman

TSL 2

Gene CFHR1, Length 723 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-205ENST00000480960 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
CFHR1-205ENST00000480960 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
CFHR1-205ENST00000480960 C7P10643 843 aa13.67□□□□□ -0.22
CFHR1-205ENST00000480960 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
CFHR1-205ENST00000480960 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
CFHR1-205ENST00000480960 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
CFHR1-205ENST00000480960 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
CFHR1-205ENST00000480960 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
CFHR1-205ENST00000480960 MIER1Q8N108 512 aa13.58□□□□□ -0.24
CFHR1-205ENST00000480960 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
CFHR1-205ENST00000480960 POTEMA6NI47 508 aa13.54□□□□□ -0.24
CFHR1-205ENST00000480960 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
CFHR1-205ENST00000480960 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
CFHR1-205ENST00000480960 MAP3K13O43283 966 aa13.53□□□□□ -0.24
CFHR1-205ENST00000480960 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
CFHR1-205ENST00000480960 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
CFHR1-205ENST00000480960 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
CFHR1-205ENST00000480960 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
CFHR1-205ENST00000480960 TIE1P35590 1138 aa13.48□□□□□ -0.25
CFHR1-205ENST00000480960 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
CFHR1-205ENST00000480960 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
CFHR1-205ENST00000480960 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
CFHR1-205ENST00000480960 LCE2DQ5TA82 110 aaPredicted RBP13.4□□□□□ -0.26
CFHR1-205ENST00000480960 SGIP1Q9BQI5 828 aa13.39□□□□□ -0.27
CFHR1-205ENST00000480960 NUBP1P53384 320 aa13.38□□□□□ -0.27
CFHR1-205ENST00000480960 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
CFHR1-205ENST00000480960 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
CFHR1-205ENST00000480960 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
CFHR1-205ENST00000480960 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
CFHR1-205ENST00000480960 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
CFHR1-205ENST00000480960 SEC24BO95487 1268 aa13.3□□□□□ -0.28
CFHR1-205ENST00000480960 IER5LQ5T953 404 aa13.3□□□□□ -0.28
CFHR1-205ENST00000480960 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
CFHR1-205ENST00000480960 IFNL1Q8IU54 200 aa13.28□□□□□ -0.28
CFHR1-205ENST00000480960 FKBP8Q14318 412 aa13.25□□□□□ -0.29
CFHR1-205ENST00000480960 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
CFHR1-205ENST00000480960 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
CFHR1-205ENST00000480960 IRX5P78411 483 aaPredicted RBP13.12□□□□□ -0.31
CFHR1-205ENST00000480960 PLCG2P16885 1265 aa13.1□□□□□ -0.31
CFHR1-205ENST00000480960 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
CFHR1-205ENST00000480960 SLAIN1Q8ND83 568 aa13.1□□□□□ -0.31
CFHR1-205ENST00000480960 PYGBP11216 843 aa13.08□□□□□ -0.32
CFHR1-205ENST00000480960 ST18O60284 1047 aa13.04□□□□□ -0.32
CFHR1-205ENST00000480960 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
CFHR1-205ENST00000480960 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
CFHR1-205ENST00000480960 PCDHB8Q9UN66 801 aa13.04□□□□□ -0.32
CFHR1-205ENST00000480960 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
CFHR1-205ENST00000480960 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
CFHR1-205ENST00000480960 GSE1Q14687 1217 aa12.91□□□□□ -0.34
CFHR1-205ENST00000480960 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
CFHR1-205ENST00000480960 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
CFHR1-205ENST00000480960 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
CFHR1-205ENST00000480960 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
CFHR1-205ENST00000480960 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
CFHR1-205ENST00000480960 TMEM121BQ9BXQ6 578 aaPredicted RBP12.88□□□□□ -0.35
CFHR1-205ENST00000480960 SNPHO15079 494 aa12.86□□□□□ -0.35
CFHR1-205ENST00000480960 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
CFHR1-205ENST00000480960 PSEN1P49768 467 aa12.79□□□□□ -0.36
CFHR1-205ENST00000480960 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
CFHR1-205ENST00000480960 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
CFHR1-205ENST00000480960 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
CFHR1-205ENST00000480960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
CFHR1-205ENST00000480960 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
CFHR1-205ENST00000480960 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
CFHR1-205ENST00000480960 SPNS2Q8IVW8 549 aa12.74□□□□□ -0.37
CFHR1-205ENST00000480960 MMRN1Q13201 1228 aa12.71□□□□□ -0.37
CFHR1-205ENST00000480960 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.37
CFHR1-205ENST00000480960 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
CFHR1-205ENST00000480960 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
CFHR1-205ENST00000480960 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
CFHR1-205ENST00000480960 EMP3P54852 163 aa12.64□□□□□ -0.39
CFHR1-205ENST00000480960 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
CFHR1-205ENST00000480960 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
CFHR1-205ENST00000480960 POTEBQ6S5H4 581 aa12.63□□□□□ -0.39
CFHR1-205ENST00000480960 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
CFHR1-205ENST00000480960 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
CFHR1-205ENST00000480960 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
CFHR1-205ENST00000480960 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
CFHR1-205ENST00000480960 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
CFHR1-205ENST00000480960 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
CFHR1-205ENST00000480960 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
CFHR1-205ENST00000480960 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
CFHR1-205ENST00000480960 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
CFHR1-205ENST00000480960 G3V3G9 751 aa12.52□□□□□ -0.41
CFHR1-205ENST00000480960 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
CFHR1-205ENST00000480960 HOXB1P14653 301 aaPredicted RBP12.46□□□□□ -0.41
CFHR1-205ENST00000480960 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
CFHR1-205ENST00000480960 DOK7Q18PE1 504 aa12.42□□□□□ -0.42
CFHR1-205ENST00000480960 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
CFHR1-205ENST00000480960 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
CFHR1-205ENST00000480960 ERBB3P21860 1342 aa12.37□□□□□ -0.43
CFHR1-205ENST00000480960 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
CFHR1-205ENST00000480960 SOX12O15370 315 aa12.34□□□□□ -0.43
CFHR1-205ENST00000480960 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
CFHR1-205ENST00000480960 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
CFHR1-205ENST00000480960 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
CFHR1-205ENST00000480960 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
CFHR1-205ENST00000480960 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
CFHR1-205ENST00000480960 VARS2Q5ST30 1063 aaKnown RBP12.29□□□□□ -0.44
CFHR1-205ENST00000480960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms